RNA–Protein interactions for RNA: ENST00000576674.1

SRRM2-227, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 4

Gene SRRM2, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-227ENST00000576674 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
SRRM2-227ENST00000576674 ABCC9O60706 1549 aa18.66■□□□□ 0.58
SRRM2-227ENST00000576674 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
SRRM2-227ENST00000576674 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
SRRM2-227ENST00000576674 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
SRRM2-227ENST00000576674 NACADO15069 1562 aa17.36■□□□□ 0.37
SRRM2-227ENST00000576674 DCAF8L2P0C7V8 631 aa17.32■□□□□ 0.36
SRRM2-227ENST00000576674 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
SRRM2-227ENST00000576674 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
SRRM2-227ENST00000576674 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
SRRM2-227ENST00000576674 MYO15BQ96JP2 1530 aa16.94■□□□□ 0.3
SRRM2-227ENST00000576674 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
SRRM2-227ENST00000576674 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
SRRM2-227ENST00000576674 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
SRRM2-227ENST00000576674 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
SRRM2-227ENST00000576674 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
SRRM2-227ENST00000576674 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
SRRM2-227ENST00000576674 DCAF1Q9Y4B6 1507 aa16.62■□□□□ 0.25
SRRM2-227ENST00000576674 DNAJC5Q9H3Z4 198 aa16.48■□□□□ 0.23
SRRM2-227ENST00000576674 CUX2O14529 1486 aa16.16■□□□□ 0.18
SRRM2-227ENST00000576674 ERCC6Q03468 1493 aa16.16■□□□□ 0.18
SRRM2-227ENST00000576674 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
SRRM2-227ENST00000576674 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
SRRM2-227ENST00000576674 NESP48681 1621 aa15.92■□□□□ 0.14
SRRM2-227ENST00000576674 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
SRRM2-227ENST00000576674 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
SRRM2-227ENST00000576674 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
SRRM2-227ENST00000576674 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
SRRM2-227ENST00000576674 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
SRRM2-227ENST00000576674 TRIM41Q8WV44 630 aa15.77■□□□□ 0.12
SRRM2-227ENST00000576674 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
SRRM2-227ENST00000576674 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
SRRM2-227ENST00000576674 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
SRRM2-227ENST00000576674 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
SRRM2-227ENST00000576674 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
SRRM2-227ENST00000576674 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
SRRM2-227ENST00000576674 MRC2Q9UBG0 1479 aa15.55■□□□□ 0.08
SRRM2-227ENST00000576674 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
SRRM2-227ENST00000576674 WDR62O43379 1518 aa15.51■□□□□ 0.07
SRRM2-227ENST00000576674 CEP164Q9UPV0 1460 aa15.45■□□□□ 0.06
SRRM2-227ENST00000576674 WIZO95785 1651 aa15.43■□□□□ 0.06
SRRM2-227ENST00000576674 FANCD2Q9BXW9 1451 aa15.39■□□□□ 0.05
SRRM2-227ENST00000576674 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
SRRM2-227ENST00000576674 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
SRRM2-227ENST00000576674 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
SRRM2-227ENST00000576674 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
SRRM2-227ENST00000576674 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
SRRM2-227ENST00000576674 CFTRP13569 1480 aa15.27■□□□□ 0.03
SRRM2-227ENST00000576674 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
SRRM2-227ENST00000576674 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
SRRM2-227ENST00000576674 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
SRRM2-227ENST00000576674 ZNF608Q9ULD9 1512 aaPredicted RBP15.14■□□□□ 0.01
SRRM2-227ENST00000576674 RSF1Q96T23 1441 aaPredicted RBP15.12■□□□□ 0.01
SRRM2-227ENST00000576674 IFT140Q96RY7 1462 aa15.12■□□□□ 0.01
SRRM2-227ENST00000576674 EIF4G3O43432 1585 aaKnown RBP15.08■□□□□ 0
SRRM2-227ENST00000576674 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
SRRM2-227ENST00000576674 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
SRRM2-227ENST00000576674 CHD1O14646 1710 aa15.06■□□□□ 0
SRRM2-227ENST00000576674 TOPBP1Q92547 1522 aa15.04■□□□□ -0
SRRM2-227ENST00000576674 FBLN2P98095 1184 aa15.01□□□□□ -0.01
SRRM2-227ENST00000576674 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
SRRM2-227ENST00000576674 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
SRRM2-227ENST00000576674 ARAP1Q96P48 1450 aa14.97□□□□□ -0.01
SRRM2-227ENST00000576674 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
SRRM2-227ENST00000576674 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.01
SRRM2-227ENST00000576674 TARBP1Q13395 1621 aaKnown RBP14.95□□□□□ -0.02
SRRM2-227ENST00000576674 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
SRRM2-227ENST00000576674 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
SRRM2-227ENST00000576674 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
SRRM2-227ENST00000576674 TDRD9Q8NDG6 1382 aaKnown RBP14.82□□□□□ -0.04
SRRM2-227ENST00000576674 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
SRRM2-227ENST00000576674 SOGA1O94964 1423 aa14.8□□□□□ -0.04
SRRM2-227ENST00000576674 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
SRRM2-227ENST00000576674 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
SRRM2-227ENST00000576674 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
SRRM2-227ENST00000576674 FGD5Q6ZNL6 1462 aa14.75□□□□□ -0.05
SRRM2-227ENST00000576674 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
SRRM2-227ENST00000576674 MAGI1Q96QZ7 1491 aaPredicted RBP14.73□□□□□ -0.05
SRRM2-227ENST00000576674 GRIN2BQ13224 1484 aa14.71□□□□□ -0.05
SRRM2-227ENST00000576674 PBRM1Q86U86 1689 aa14.7□□□□□ -0.06
SRRM2-227ENST00000576674 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
SRRM2-227ENST00000576674 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
SRRM2-227ENST00000576674 CUX1P39880 1505 aa14.67□□□□□ -0.06
SRRM2-227ENST00000576674 ERCC6L2Q5T890 1561 aa14.57□□□□□ -0.08
SRRM2-227ENST00000576674 ABCA5Q8WWZ7 1642 aa14.57□□□□□ -0.08
SRRM2-227ENST00000576674 ABCA10Q8WWZ4 1543 aa14.53□□□□□ -0.08
SRRM2-227ENST00000576674 CEP170Q5SW79 1584 aa14.52□□□□□ -0.08
SRRM2-227ENST00000576674 GRIN2AQ12879 1464 aa14.52□□□□□ -0.08
SRRM2-227ENST00000576674 ADAMTS12P58397 1594 aa14.49□□□□□ -0.09
SRRM2-227ENST00000576674 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
SRRM2-227ENST00000576674 SHROOM2Q13796 1616 aa14.44□□□□□ -0.1
SRRM2-227ENST00000576674 NUP160Q12769 1436 aa14.44□□□□□ -0.1
SRRM2-227ENST00000576674 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
SRRM2-227ENST00000576674 FHAD1B1AJZ9 1412 aa14.41□□□□□ -0.1
SRRM2-227ENST00000576674 PRG4Q92954 1404 aaPredicted RBP14.39□□□□□ -0.11
SRRM2-227ENST00000576674 BIVM-ERCC5R4GMW8 1640 aa14.37□□□□□ -0.11
SRRM2-227ENST00000576674 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
SRRM2-227ENST00000576674 FAM69CQ0P6D2 419 aa14.35□□□□□ -0.11
SRRM2-227ENST00000576674 ERICH3Q5RHP9 1530 aa14.35□□□□□ -0.11
SRRM2-227ENST00000576674 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms