RNA–Protein interactions for RNA: ENST00000575656.5

ARHGAP17-218, Transcript of Rho GTPase activating protein 17, humanhuman

TSL 3

Gene ARHGAP17, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP17-218ENST00000575656 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
ARHGAP17-218ENST00000575656 AEBP2Q6ZN18 517 aaPredicted RBP24.68■■□□□ 1.54
ARHGAP17-218ENST00000575656 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
ARHGAP17-218ENST00000575656 ABCC9O60706 1549 aa22.83■■□□□ 1.25
ARHGAP17-218ENST00000575656 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
ARHGAP17-218ENST00000575656 DNAJC5BQ9UF47 199 aa21.96■■□□□ 1.11
ARHGAP17-218ENST00000575656 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
ARHGAP17-218ENST00000575656 NACADO15069 1562 aa21.31■■□□□ 1
ARHGAP17-218ENST00000575656 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
ARHGAP17-218ENST00000575656 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.97
ARHGAP17-218ENST00000575656 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
ARHGAP17-218ENST00000575656 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.95
ARHGAP17-218ENST00000575656 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
ARHGAP17-218ENST00000575656 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
ARHGAP17-218ENST00000575656 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
ARHGAP17-218ENST00000575656 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
ARHGAP17-218ENST00000575656 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
ARHGAP17-218ENST00000575656 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.9
ARHGAP17-218ENST00000575656 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
ARHGAP17-218ENST00000575656 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
ARHGAP17-218ENST00000575656 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
ARHGAP17-218ENST00000575656 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
ARHGAP17-218ENST00000575656 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
ARHGAP17-218ENST00000575656 CUX2O14529 1486 aa19.96■□□□□ 0.79
ARHGAP17-218ENST00000575656 NCAPD3P42695 1498 aa19.71■□□□□ 0.75
ARHGAP17-218ENST00000575656 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
ARHGAP17-218ENST00000575656 FOXD1Q16676 465 aa19.64■□□□□ 0.73
ARHGAP17-218ENST00000575656 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
ARHGAP17-218ENST00000575656 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
ARHGAP17-218ENST00000575656 NESP48681 1621 aa19.49■□□□□ 0.71
ARHGAP17-218ENST00000575656 THOC2Q8NI27 1593 aaKnown RBP19.45■□□□□ 0.7
ARHGAP17-218ENST00000575656 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
ARHGAP17-218ENST00000575656 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
ARHGAP17-218ENST00000575656 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
ARHGAP17-218ENST00000575656 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
ARHGAP17-218ENST00000575656 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.67
ARHGAP17-218ENST00000575656 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
ARHGAP17-218ENST00000575656 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
ARHGAP17-218ENST00000575656 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
ARHGAP17-218ENST00000575656 PDS5BQ9NTI5 1447 aa19.17■□□□□ 0.66
ARHGAP17-218ENST00000575656 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
ARHGAP17-218ENST00000575656 WDR62O43379 1518 aa19.07■□□□□ 0.64
ARHGAP17-218ENST00000575656 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
ARHGAP17-218ENST00000575656 CADPSQ9ULU8 1353 aa19.04■□□□□ 0.64
ARHGAP17-218ENST00000575656 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
ARHGAP17-218ENST00000575656 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
ARHGAP17-218ENST00000575656 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
ARHGAP17-218ENST00000575656 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
ARHGAP17-218ENST00000575656 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
ARHGAP17-218ENST00000575656 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
ARHGAP17-218ENST00000575656 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
ARHGAP17-218ENST00000575656 CFTRP13569 1480 aa18.74■□□□□ 0.59
ARHGAP17-218ENST00000575656 WIZO95785 1651 aa18.73■□□□□ 0.59
ARHGAP17-218ENST00000575656 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
ARHGAP17-218ENST00000575656 ARHGEF11O15085 1522 aa18.64■□□□□ 0.57
ARHGAP17-218ENST00000575656 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
ARHGAP17-218ENST00000575656 IFT140Q96RY7 1462 aa18.52■□□□□ 0.56
ARHGAP17-218ENST00000575656 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
ARHGAP17-218ENST00000575656 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
ARHGAP17-218ENST00000575656 MSH5O43196 834 aa18.48■□□□□ 0.55
ARHGAP17-218ENST00000575656 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
ARHGAP17-218ENST00000575656 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
ARHGAP17-218ENST00000575656 RSF1Q96T23 1441 aaPredicted RBP18.45■□□□□ 0.54
ARHGAP17-218ENST00000575656 ADRA2BP18089 450 aa18.44■□□□□ 0.54
ARHGAP17-218ENST00000575656 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
ARHGAP17-218ENST00000575656 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
ARHGAP17-218ENST00000575656 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
ARHGAP17-218ENST00000575656 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
ARHGAP17-218ENST00000575656 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
ARHGAP17-218ENST00000575656 CHD1O14646 1710 aa18.35■□□□□ 0.53
ARHGAP17-218ENST00000575656 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
ARHGAP17-218ENST00000575656 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
ARHGAP17-218ENST00000575656 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.524e-12■■■□□ 18.4
ARHGAP17-218ENST00000575656 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
ARHGAP17-218ENST00000575656 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
ARHGAP17-218ENST00000575656 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
ARHGAP17-218ENST00000575656 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
ARHGAP17-218ENST00000575656 FBLN2P98095 1184 aa18.15■□□□□ 0.5
ARHGAP17-218ENST00000575656 WDR97A6NE52 1622 aa18.1■□□□□ 0.49
ARHGAP17-218ENST00000575656 RAD54L2Q9Y4B4 1467 aa18.09■□□□□ 0.49
ARHGAP17-218ENST00000575656 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
ARHGAP17-218ENST00000575656 TDRD9Q8NDG6 1382 aaKnown RBP18.07■□□□□ 0.48
ARHGAP17-218ENST00000575656 SYNJ1O43426 1573 aa18.07■□□□□ 0.48
ARHGAP17-218ENST00000575656 SOGA1O94964 1423 aa18.06■□□□□ 0.48
ARHGAP17-218ENST00000575656 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
ARHGAP17-218ENST00000575656 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
ARHGAP17-218ENST00000575656 SYNJ2O15056 1496 aa17.99■□□□□ 0.47
ARHGAP17-218ENST00000575656 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
ARHGAP17-218ENST00000575656 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
ARHGAP17-218ENST00000575656 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
ARHGAP17-218ENST00000575656 CUX1P39880 1505 aa17.9■□□□□ 0.46
ARHGAP17-218ENST00000575656 PBRM1Q86U86 1689 aa17.85■□□□□ 0.45
ARHGAP17-218ENST00000575656 ERCC6L2Q5T890 1561 aa17.84■□□□□ 0.45
ARHGAP17-218ENST00000575656 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
ARHGAP17-218ENST00000575656 ABCA10Q8WWZ4 1543 aa17.78■□□□□ 0.44
ARHGAP17-218ENST00000575656 CEP170Q5SW79 1584 aa17.76■□□□□ 0.43
ARHGAP17-218ENST00000575656 NUP160Q12769 1436 aa17.76■□□□□ 0.43
ARHGAP17-218ENST00000575656 KIF13AQ9H1H9 1805 aa17.76■□□□□ 0.43
ARHGAP17-218ENST00000575656 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
ARHGAP17-218ENST00000575656 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms