RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
NDC80-204ENST00000575515 ABCC9O60706 1549 aa23.39■■□□□ 1.34
NDC80-204ENST00000575515 CCDC180Q9P1Z9 1646 aa22.98■■□□□ 1.27
NDC80-204ENST00000575515 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
NDC80-204ENST00000575515 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.12
NDC80-204ENST00000575515 NACADO15069 1562 aa21.78■■□□□ 1.08
NDC80-204ENST00000575515 UNC13AQ9UPW8 1703 aa21.68■■□□□ 1.06
NDC80-204ENST00000575515 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
NDC80-204ENST00000575515 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
NDC80-204ENST00000575515 BICRAQ9NZM4 1560 aa21.41■■□□□ 1.02
NDC80-204ENST00000575515 MYO15BQ96JP2 1530 aa21.25■□□□□ 0.99
NDC80-204ENST00000575515 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
NDC80-204ENST00000575515 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
NDC80-204ENST00000575515 SHROOM4Q9ULL8 1493 aa21.06■□□□□ 0.96
NDC80-204ENST00000575515 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
NDC80-204ENST00000575515 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
NDC80-204ENST00000575515 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
NDC80-204ENST00000575515 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
NDC80-204ENST00000575515 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
NDC80-204ENST00000575515 CUX2O14529 1486 aa20.34■□□□□ 0.85
NDC80-204ENST00000575515 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
NDC80-204ENST00000575515 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
NDC80-204ENST00000575515 NESP48681 1621 aa19.94■□□□□ 0.78
NDC80-204ENST00000575515 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
NDC80-204ENST00000575515 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
NDC80-204ENST00000575515 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
NDC80-204ENST00000575515 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
NDC80-204ENST00000575515 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
NDC80-204ENST00000575515 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
NDC80-204ENST00000575515 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
NDC80-204ENST00000575515 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
NDC80-204ENST00000575515 LAMC3Q9Y6N6 1575 aa19.76■□□□□ 0.75
NDC80-204ENST00000575515 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
NDC80-204ENST00000575515 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
NDC80-204ENST00000575515 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
NDC80-204ENST00000575515 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
NDC80-204ENST00000575515 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
NDC80-204ENST00000575515 WDR62O43379 1518 aa19.47■□□□□ 0.71
NDC80-204ENST00000575515 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
NDC80-204ENST00000575515 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
NDC80-204ENST00000575515 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
NDC80-204ENST00000575515 WIZO95785 1651 aa19.28■□□□□ 0.68
NDC80-204ENST00000575515 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
NDC80-204ENST00000575515 RIMBP3CA6NJZ7 1639 aa19.2■□□□□ 0.66
NDC80-204ENST00000575515 RIMBP3BA6NNM3 1639 aa19.2■□□□□ 0.66
NDC80-204ENST00000575515 RIMBP3Q9UFD9 1639 aa19.2■□□□□ 0.66
NDC80-204ENST00000575515 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
NDC80-204ENST00000575515 CFTRP13569 1480 aa19.1■□□□□ 0.65
NDC80-204ENST00000575515 PRDM2Q13029 1718 aa19.08■□□□□ 0.64
NDC80-204ENST00000575515 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
NDC80-204ENST00000575515 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
NDC80-204ENST00000575515 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
NDC80-204ENST00000575515 IFT140Q96RY7 1462 aa18.94■□□□□ 0.62
NDC80-204ENST00000575515 CHD1O14646 1710 aa18.91■□□□□ 0.62
NDC80-204ENST00000575515 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
NDC80-204ENST00000575515 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
NDC80-204ENST00000575515 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
NDC80-204ENST00000575515 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
NDC80-204ENST00000575515 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
NDC80-204ENST00000575515 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
NDC80-204ENST00000575515 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
NDC80-204ENST00000575515 ABCC8Q09428 1581 aa18.75■□□□□ 0.59
NDC80-204ENST00000575515 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
NDC80-204ENST00000575515 FBLN2P98095 1184 aa18.73■□□□□ 0.59
NDC80-204ENST00000575515 TARBP1Q13395 1621 aaKnown RBP18.73■□□□□ 0.59
NDC80-204ENST00000575515 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
NDC80-204ENST00000575515 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.594e-6■□□□□ 10.8
NDC80-204ENST00000575515 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
NDC80-204ENST00000575515 CLASP1Q7Z460 1538 aa18.57■□□□□ 0.56
NDC80-204ENST00000575515 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
NDC80-204ENST00000575515 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
NDC80-204ENST00000575515 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
NDC80-204ENST00000575515 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
NDC80-204ENST00000575515 WDR97A6NE52 1622 aa18.51■□□□□ 0.55
NDC80-204ENST00000575515 SOGA1O94964 1423 aa18.49■□□□□ 0.55
NDC80-204ENST00000575515 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
NDC80-204ENST00000575515 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
NDC80-204ENST00000575515 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
NDC80-204ENST00000575515 PBRM1Q86U86 1689 aa18.43■□□□□ 0.54
NDC80-204ENST00000575515 GRIN2BQ13224 1484 aa18.41■□□□□ 0.54
NDC80-204ENST00000575515 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
NDC80-204ENST00000575515 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
NDC80-204ENST00000575515 CUX1P39880 1505 aa18.33■□□□□ 0.53
NDC80-204ENST00000575515 ERCC6L2Q5T890 1561 aa18.25■□□□□ 0.51
NDC80-204ENST00000575515 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
NDC80-204ENST00000575515 KIF13AQ9H1H9 1805 aa18.24■□□□□ 0.51
NDC80-204ENST00000575515 CEP170Q5SW79 1584 aa18.2■□□□□ 0.5
NDC80-204ENST00000575515 GRIN2AQ12879 1464 aa18.18■□□□□ 0.5
NDC80-204ENST00000575515 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
NDC80-204ENST00000575515 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
NDC80-204ENST00000575515 SHROOM2Q13796 1616 aa18.14■□□□□ 0.49
NDC80-204ENST00000575515 NUP160Q12769 1436 aa18.1■□□□□ 0.49
NDC80-204ENST00000575515 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
NDC80-204ENST00000575515 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
NDC80-204ENST00000575515 PRG4Q92954 1404 aaPredicted RBP17.99■□□□□ 0.47
NDC80-204ENST00000575515 TSPOAP1O95153 1857 aa17.99■□□□□ 0.47
NDC80-204ENST00000575515 KDM6BO15054 1643 aa17.98■□□□□ 0.47
NDC80-204ENST00000575515 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
NDC80-204ENST00000575515 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
NDC80-204ENST00000575515 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms