RNA–Protein interactions for RNA: ENST00000575479.1

DNASE1-212, Transcript of deoxyribonuclease 1, humanhuman

TSL 2

Gene DNASE1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNASE1-212ENST00000575479 NISCHQ9Y2I1 1504 aa27.76■■■□□ 2.03
DNASE1-212ENST00000575479 ABCC9O60706 1549 aa25.36■■□□□ 1.65
DNASE1-212ENST00000575479 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
DNASE1-212ENST00000575479 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
DNASE1-212ENST00000575479 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.43
DNASE1-212ENST00000575479 NACADO15069 1562 aa23.7■■□□□ 1.38
DNASE1-212ENST00000575479 UNC13AQ9UPW8 1703 aa23.58■■□□□ 1.37
DNASE1-212ENST00000575479 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
DNASE1-212ENST00000575479 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.36
DNASE1-212ENST00000575479 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
DNASE1-212ENST00000575479 MYO15BQ96JP2 1530 aa23.24■■□□□ 1.31
DNASE1-212ENST00000575479 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
DNASE1-212ENST00000575479 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
DNASE1-212ENST00000575479 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
DNASE1-212ENST00000575479 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
DNASE1-212ENST00000575479 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
DNASE1-212ENST00000575479 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
DNASE1-212ENST00000575479 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
DNASE1-212ENST00000575479 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
DNASE1-212ENST00000575479 CUX2O14529 1486 aa21.9■■□□□ 1.1
DNASE1-212ENST00000575479 NCAPD3P42695 1498 aa21.88■■□□□ 1.09
DNASE1-212ENST00000575479 ERCC6Q03468 1493 aa21.85■■□□□ 1.09
DNASE1-212ENST00000575479 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
DNASE1-212ENST00000575479 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
DNASE1-212ENST00000575479 NESP48681 1621 aa21.74■■□□□ 1.07
DNASE1-212ENST00000575479 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
DNASE1-212ENST00000575479 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
DNASE1-212ENST00000575479 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
DNASE1-212ENST00000575479 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
DNASE1-212ENST00000575479 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
DNASE1-212ENST00000575479 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
DNASE1-212ENST00000575479 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
DNASE1-212ENST00000575479 LAMC3Q9Y6N6 1575 aa21.46■■□□□ 1.03
DNASE1-212ENST00000575479 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
DNASE1-212ENST00000575479 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
DNASE1-212ENST00000575479 WIZO95785 1651 aa21.2■□□□□ 0.98
DNASE1-212ENST00000575479 CADPSQ9ULU8 1353 aa21.2■□□□□ 0.98
DNASE1-212ENST00000575479 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
DNASE1-212ENST00000575479 WDR62O43379 1518 aa21.16■□□□□ 0.98
DNASE1-212ENST00000575479 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
DNASE1-212ENST00000575479 CEP164Q9UPV0 1460 aa21.03■□□□□ 0.96
DNASE1-212ENST00000575479 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
DNASE1-212ENST00000575479 CFTRP13569 1480 aa20.91■□□□□ 0.94
DNASE1-212ENST00000575479 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
DNASE1-212ENST00000575479 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
DNASE1-212ENST00000575479 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
DNASE1-212ENST00000575479 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
DNASE1-212ENST00000575479 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
DNASE1-212ENST00000575479 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
DNASE1-212ENST00000575479 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
DNASE1-212ENST00000575479 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
DNASE1-212ENST00000575479 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
DNASE1-212ENST00000575479 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
DNASE1-212ENST00000575479 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
DNASE1-212ENST00000575479 ARHGEF11O15085 1522 aa20.58■□□□□ 0.88
DNASE1-212ENST00000575479 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
DNASE1-212ENST00000575479 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
DNASE1-212ENST00000575479 CHD1O14646 1710 aa20.51■□□□□ 0.87
DNASE1-212ENST00000575479 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
DNASE1-212ENST00000575479 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.87
DNASE1-212ENST00000575479 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
DNASE1-212ENST00000575479 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
DNASE1-212ENST00000575479 CYB5RLQ6IPT4 315 aa20.4■□□□□ 0.86
DNASE1-212ENST00000575479 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
DNASE1-212ENST00000575479 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
DNASE1-212ENST00000575479 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
DNASE1-212ENST00000575479 FBLN2P98095 1184 aa20.3■□□□□ 0.84
DNASE1-212ENST00000575479 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
DNASE1-212ENST00000575479 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
DNASE1-212ENST00000575479 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
DNASE1-212ENST00000575479 SOGA1O94964 1423 aa20.21■□□□□ 0.83
DNASE1-212ENST00000575479 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
DNASE1-212ENST00000575479 CLASP1Q7Z460 1538 aa20.2■□□□□ 0.82
DNASE1-212ENST00000575479 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
DNASE1-212ENST00000575479 CUX1P39880 1505 aa20.15■□□□□ 0.82
DNASE1-212ENST00000575479 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
DNASE1-212ENST00000575479 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
DNASE1-212ENST00000575479 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
DNASE1-212ENST00000575479 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
DNASE1-212ENST00000575479 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
DNASE1-212ENST00000575479 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
DNASE1-212ENST00000575479 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
DNASE1-212ENST00000575479 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
DNASE1-212ENST00000575479 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
DNASE1-212ENST00000575479 ABCA5Q8WWZ7 1642 aa19.97■□□□□ 0.79
DNASE1-212ENST00000575479 ERCC6L2Q5T890 1561 aa19.93■□□□□ 0.78
DNASE1-212ENST00000575479 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
DNASE1-212ENST00000575479 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
DNASE1-212ENST00000575479 GRIN2AQ12879 1464 aa19.84■□□□□ 0.77
DNASE1-212ENST00000575479 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
DNASE1-212ENST00000575479 NUP160Q12769 1436 aa19.77■□□□□ 0.76
DNASE1-212ENST00000575479 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
DNASE1-212ENST00000575479 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
DNASE1-212ENST00000575479 KIF13AQ9H1H9 1805 aa19.73■□□□□ 0.75
DNASE1-212ENST00000575479 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
DNASE1-212ENST00000575479 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
DNASE1-212ENST00000575479 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
DNASE1-212ENST00000575479 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
DNASE1-212ENST00000575479 ERICH3Q5RHP9 1530 aa19.65■□□□□ 0.74
DNASE1-212ENST00000575479 PRG4Q92954 1404 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms