RNA–Protein interactions for RNA: ENST00000574060.1

RNF213-218, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-218ENST00000574060 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
RNF213-218ENST00000574060 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
RNF213-218ENST00000574060 ABCC9O60706 1549 aa28.37■■■□□ 2.13
RNF213-218ENST00000574060 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
RNF213-218ENST00000574060 NACADO15069 1562 aa27.3■■□□□ 1.96
RNF213-218ENST00000574060 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
RNF213-218ENST00000574060 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
RNF213-218ENST00000574060 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
RNF213-218ENST00000574060 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
RNF213-218ENST00000574060 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
RNF213-218ENST00000574060 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
RNF213-218ENST00000574060 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
RNF213-218ENST00000574060 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
RNF213-218ENST00000574060 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
RNF213-218ENST00000574060 SHROOM4Q9ULL8 1493 aa26.27■■□□□ 1.8
RNF213-218ENST00000574060 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
RNF213-218ENST00000574060 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
RNF213-218ENST00000574060 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.7
RNF213-218ENST00000574060 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
RNF213-218ENST00000574060 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
RNF213-218ENST00000574060 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
RNF213-218ENST00000574060 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
RNF213-218ENST00000574060 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
RNF213-218ENST00000574060 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
RNF213-218ENST00000574060 MROH2BQ7Z745 1585 aa25.12■■□□□ 1.61
RNF213-218ENST00000574060 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
RNF213-218ENST00000574060 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
RNF213-218ENST00000574060 BAZ1BQ9UIG0 1483 aaKnown RBP24.97■■□□□ 1.59
RNF213-218ENST00000574060 WIZO95785 1651 aa24.85■■□□□ 1.57
RNF213-218ENST00000574060 RSF1Q96T23 1441 aaPredicted RBP24.81■■□□□ 1.56
RNF213-218ENST00000574060 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
RNF213-218ENST00000574060 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
RNF213-218ENST00000574060 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
RNF213-218ENST00000574060 NESP48681 1621 aa24.53■■□□□ 1.52
RNF213-218ENST00000574060 ERCC6Q03468 1493 aa24.47■■□□□ 1.51
RNF213-218ENST00000574060 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
RNF213-218ENST00000574060 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
RNF213-218ENST00000574060 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
RNF213-218ENST00000574060 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
RNF213-218ENST00000574060 CFTRP13569 1480 aa24.28■■□□□ 1.48
RNF213-218ENST00000574060 CUX2O14529 1486 aa24.25■■□□□ 1.47
RNF213-218ENST00000574060 THOC2Q8NI27 1593 aaKnown RBP24.23■■□□□ 1.47
RNF213-218ENST00000574060 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
RNF213-218ENST00000574060 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
RNF213-218ENST00000574060 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
RNF213-218ENST00000574060 SUPT5HO00267 1087 aaKnown RBP24.11■■□□□ 1.45
RNF213-218ENST00000574060 MRC2Q9UBG0 1479 aa24.1■■□□□ 1.45
RNF213-218ENST00000574060 WDR62O43379 1518 aa24.04■■□□□ 1.44
RNF213-218ENST00000574060 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
RNF213-218ENST00000574060 ABCC8Q09428 1581 aa23.78■■□□□ 1.4
RNF213-218ENST00000574060 TOPBP1Q92547 1522 aa23.76■■□□□ 1.39
RNF213-218ENST00000574060 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
RNF213-218ENST00000574060 IFT140Q96RY7 1462 aa23.63■■□□□ 1.37
RNF213-218ENST00000574060 CUX1P39880 1505 aa23.57■■□□□ 1.36
RNF213-218ENST00000574060 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
RNF213-218ENST00000574060 TARBP1Q13395 1621 aaKnown RBP23.52■■□□□ 1.36
RNF213-218ENST00000574060 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
RNF213-218ENST00000574060 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
RNF213-218ENST00000574060 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
RNF213-218ENST00000574060 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
RNF213-218ENST00000574060 SOGA1O94964 1423 aa23.44■■□□□ 1.34
RNF213-218ENST00000574060 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
RNF213-218ENST00000574060 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
RNF213-218ENST00000574060 BIVM-ERCC5R4GMW8 1640 aa23.41■■□□□ 1.34
RNF213-218ENST00000574060 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
RNF213-218ENST00000574060 WDR97A6NE52 1622 aa23.38■■□□□ 1.33
RNF213-218ENST00000574060 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
RNF213-218ENST00000574060 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.33
RNF213-218ENST00000574060 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
RNF213-218ENST00000574060 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
RNF213-218ENST00000574060 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
RNF213-218ENST00000574060 GRIN2BQ13224 1484 aa23.19■■□□□ 1.3
RNF213-218ENST00000574060 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
RNF213-218ENST00000574060 GAPVD1Q14C86 1478 aa23.18■■□□□ 1.3
RNF213-218ENST00000574060 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
RNF213-218ENST00000574060 SNAPC4Q5SXM2 1469 aa23.16■■□□□ 1.3
RNF213-218ENST00000574060 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
RNF213-218ENST00000574060 CHD1O14646 1710 aa23.16■■□□□ 1.3
RNF213-218ENST00000574060 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
RNF213-218ENST00000574060 FBLN2P98095 1184 aa23.04■■□□□ 1.28
RNF213-218ENST00000574060 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
RNF213-218ENST00000574060 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
RNF213-218ENST00000574060 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
RNF213-218ENST00000574060 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
RNF213-218ENST00000574060 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
RNF213-218ENST00000574060 CLASP1Q7Z460 1538 aa22.9■■□□□ 1.26
RNF213-218ENST00000574060 GRIN2AQ12879 1464 aa22.9■■□□□ 1.26
RNF213-218ENST00000574060 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
RNF213-218ENST00000574060 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
RNF213-218ENST00000574060 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
RNF213-218ENST00000574060 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
RNF213-218ENST00000574060 CUL7Q14999 1698 aa22.83■■□□□ 1.24
RNF213-218ENST00000574060 IGF1RP08069 1367 aa22.8■■□□□ 1.24
RNF213-218ENST00000574060 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
RNF213-218ENST00000574060 NUP160Q12769 1436 aa22.8■■□□□ 1.24
RNF213-218ENST00000574060 CEP170Q5SW79 1584 aa22.79■■□□□ 1.24
RNF213-218ENST00000574060 CARMIL1Q5VZK9 1371 aa22.68■■□□□ 1.22
RNF213-218ENST00000574060 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
RNF213-218ENST00000574060 SHROOM2Q13796 1616 aa22.66■■□□□ 1.22
RNF213-218ENST00000574060 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms