RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 NISCHQ9Y2I1 1504 aa51.23■■■■■ 5.79
ABR-221ENST00000573559 CCDC180Q9P1Z9 1646 aa45.56■■■■■ 4.88
ABR-221ENST00000573559 ABCC9O60706 1549 aa44.53■■■■■ 4.72
ABR-221ENST00000573559 RB1CC1Q8TDY2 1594 aa42.85■■■■■ 4.45
ABR-221ENST00000573559 DCAF8L2P0C7V8 631 aa42.84■■■■■ 4.45
ABR-221ENST00000573559 NACADO15069 1562 aa42.78■■■■■ 4.44
ABR-221ENST00000573559 ZCCHC6Q5VYS8 1495 aaKnown RBP42.7■■■■■ 4.43
ABR-221ENST00000573559 MYO15BQ96JP2 1530 aa42.48■■■■■ 4.39
ABR-221ENST00000573559 DCAF1Q9Y4B6 1507 aa42.35■■■■■ 4.37
ABR-221ENST00000573559 UNC13AQ9UPW8 1703 aa41.92■■■■■ 4.3
ABR-221ENST00000573559 SCRIBQ14160 1630 aa41.64■■■■■ 4.26
ABR-221ENST00000573559 PABPN1Q86U42 306 aaKnown RBP eCLIP41.6■■■■■ 4.25
ABR-221ENST00000573559 BICRAQ9NZM4 1560 aa41.52■■■■■ 4.24
ABR-221ENST00000573559 SHROOM4Q9ULL8 1493 aa41.06■■■■■ 4.16
ABR-221ENST00000573559 DNAJC5BQ9UF47 199 aa40.71■■■■■ 4.11
ABR-221ENST00000573559 EIF4G1Q04637 1599 aaKnown RBP40.44■■■■■ 4.06
ABR-221ENST00000573559 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
ABR-221ENST00000573559 CECR2Q9BXF3 1484 aa39.98■■■■□ 3.99
ABR-221ENST00000573559 SMARCA4P51532 1647 aa39.78■■■■□ 3.96
ABR-221ENST00000573559 BAZ1AQ9NRL2 1556 aaPredicted RBP39.72■■■■□ 3.95
ABR-221ENST00000573559 MROH2BQ7Z745 1585 aa39.5■■■■□ 3.91
ABR-221ENST00000573559 ATAD2BQ9ULI0 1458 aa39.49■■■■□ 3.91
ABR-221ENST00000573559 SMARCA2P51531 1590 aa39.49■■■■□ 3.91
ABR-221ENST00000573559 NCAPD3P42695 1498 aa39.43■■■■□ 3.9
ABR-221ENST00000573559 PEG3Q9GZU2 1588 aa39.33■■■■□ 3.89
ABR-221ENST00000573559 HMGXB3Q12766 1538 aa39.3■■■■□ 3.88
ABR-221ENST00000573559 BAZ1BQ9UIG0 1483 aaKnown RBP39.23■■■■□ 3.87
ABR-221ENST00000573559 WIZO95785 1651 aa39.13■■■■□ 3.85
ABR-221ENST00000573559 RSF1Q96T23 1441 aaPredicted RBP39.05■■■■□ 3.84
ABR-221ENST00000573559 TOP2AP11388 1531 aaKnown RBP38.69■■■■□ 3.78
ABR-221ENST00000573559 NESP48681 1621 aa38.55■■■■□ 3.76
ABR-221ENST00000573559 LAMC3Q9Y6N6 1575 aa38.44■■■■□ 3.74
ABR-221ENST00000573559 ERCC6Q03468 1493 aa38.41■■■■□ 3.74
ABR-221ENST00000573559 CADPSQ9ULU8 1353 aa38.31■■■■□ 3.72
ABR-221ENST00000573559 CCDC88BA6NC98 1476 aa38.2■■■■□ 3.71
ABR-221ENST00000573559 SUPT5HO00267 1087 aaKnown RBP38.18■■■■□ 3.7
ABR-221ENST00000573559 PDS5BQ9NTI5 1447 aa38.16■■■■□ 3.7
ABR-221ENST00000573559 KIF21AQ7Z4S6 1674 aa38.14■■■■□ 3.7
ABR-221ENST00000573559 CFTRP13569 1480 aa38.09■■■■□ 3.69
ABR-221ENST00000573559 THOC2Q8NI27 1593 aaKnown RBP37.96■■■■□ 3.67
ABR-221ENST00000573559 PRDM2Q13029 1718 aa37.92■■■■□ 3.66
ABR-221ENST00000573559 FANCD2Q9BXW9 1451 aa37.91■■■■□ 3.66
ABR-221ENST00000573559 CUX2O14529 1486 aa37.9■■■■□ 3.66
ABR-221ENST00000573559 CEP164Q9UPV0 1460 aa37.88■■■■□ 3.65
ABR-221ENST00000573559 MRC2Q9UBG0 1479 aa37.8■■■■□ 3.64
ABR-221ENST00000573559 WDR62O43379 1518 aa37.66■■■■□ 3.62
ABR-221ENST00000573559 URB2Q14146 1524 aaKnown RBP37.52■■■■□ 3.6
ABR-221ENST00000573559 TOPBP1Q92547 1522 aa37.31■■■■□ 3.56
ABR-221ENST00000573559 DNMBPQ6XZF7 1577 aa37.29■■■■□ 3.56
ABR-221ENST00000573559 ABCC8Q09428 1581 aa37.28■■■■□ 3.56
ABR-221ENST00000573559 CUX1P39880 1505 aa37.06■■■■□ 3.52
ABR-221ENST00000573559 IFT140Q96RY7 1462 aa37.06■■■■□ 3.52
ABR-221ENST00000573559 POLA1P09884 1462 aaPredicted RBP37.01■■■■□ 3.51
ABR-221ENST00000573559 FGD5Q6ZNL6 1462 aa36.94■■■■□ 3.5
ABR-221ENST00000573559 TARBP1Q13395 1621 aaKnown RBP36.9■■■■□ 3.5
ABR-221ENST00000573559 ZNF608Q9ULD9 1512 aaPredicted RBP36.9■■■■□ 3.5
ABR-221ENST00000573559 WRNQ14191 1432 aaPredicted RBP eCLIP36.85■■■■□ 3.49
ABR-221ENST00000573559 RAD54L2Q9Y4B4 1467 aa36.85■■■■□ 3.49
ABR-221ENST00000573559 SOGA1O94964 1423 aa36.84■■■■□ 3.49
ABR-221ENST00000573559 EIF4G3O43432 1585 aaKnown RBP36.8■■■■□ 3.48
ABR-221ENST00000573559 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
ABR-221ENST00000573559 BIVM-ERCC5R4GMW8 1640 aa36.78■■■■□ 3.48
ABR-221ENST00000573559 TOP2BQ02880 1626 aa36.77■■■■□ 3.48
ABR-221ENST00000573559 AQRO60306 1485 aaKnown RBP eCLIP36.69■■■■□ 3.46
ABR-221ENST00000573559 WDR97A6NE52 1622 aa36.66■■■■□ 3.46
ABR-221ENST00000573559 TDRD9Q8NDG6 1382 aaKnown RBP36.63■■■■□ 3.45
ABR-221ENST00000573559 DNAJC5Q9H3Z4 198 aa36.6■■■■□ 3.45
ABR-221ENST00000573559 ABCA10Q8WWZ4 1543 aa36.55■■■■□ 3.44
ABR-221ENST00000573559 ABCA5Q8WWZ7 1642 aa36.44■■■■□ 3.42
ABR-221ENST00000573559 GAPVD1Q14C86 1478 aa36.43■■■■□ 3.42
ABR-221ENST00000573559 PBRM1Q86U86 1689 aa36.42■■■■□ 3.42
ABR-221ENST00000573559 GRIN2BQ13224 1484 aa36.41■■■■□ 3.42
ABR-221ENST00000573559 SNAPC4Q5SXM2 1469 aa36.38■■■■□ 3.41
ABR-221ENST00000573559 CHD1O14646 1710 aa36.35■■■■□ 3.41
ABR-221ENST00000573559 OSCARQ8IYS5 282 aa36.32■■■■□ 3.4
ABR-221ENST00000573559 MAGI1Q96QZ7 1491 aaPredicted RBP36.31■■■■□ 3.4
ABR-221ENST00000573559 FBLN2P98095 1184 aa36.28■■■■□ 3.4
ABR-221ENST00000573559 SYNJ2O15056 1496 aa36.17■■■■□ 3.38
ABR-221ENST00000573559 CHMP7Q8WUX9 453 aaPredicted RBP36.15■■■■□ 3.38
ABR-221ENST00000573559 ERICH3Q5RHP9 1530 aa36.12■■■■□ 3.37
ABR-221ENST00000573559 ADAMTS12P58397 1594 aa36.1■■■■□ 3.37
ABR-221ENST00000573559 KIF27Q86VH2 1401 aa36.07■■■■□ 3.36
ABR-221ENST00000573559 TRIM41Q8WV44 630 aa36.02■■■■□ 3.36
ABR-221ENST00000573559 FHAD1B1AJZ9 1412 aa36■■■■□ 3.35
ABR-221ENST00000573559 GRIN2AQ12879 1464 aa35.95■■■■□ 3.35
ABR-221ENST00000573559 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
ABR-221ENST00000573559 IGF1RP08069 1367 aa35.86■■■■□ 3.33
ABR-221ENST00000573559 CUL7Q14999 1698 aa35.85■■■■□ 3.33
ABR-221ENST00000573559 RIMBP3CA6NJZ7 1639 aa35.81■■■■□ 3.32
ABR-221ENST00000573559 RIMBP3BA6NNM3 1639 aa35.81■■■■□ 3.32
ABR-221ENST00000573559 RIMBP3Q9UFD9 1639 aa35.81■■■■□ 3.32
ABR-221ENST00000573559 CEP170Q5SW79 1584 aa35.8■■■■□ 3.32
ABR-221ENST00000573559 ARHGEF11O15085 1522 aa35.79■■■■□ 3.32
ABR-221ENST00000573559 RUSC2Q8N2Y8 1516 aa35.77■■■■□ 3.32
ABR-221ENST00000573559 NUP160Q12769 1436 aa35.75■■■■□ 3.31
ABR-221ENST00000573559 CARMIL1Q5VZK9 1371 aa35.68■■■■□ 3.3
ABR-221ENST00000573559 CHIC1Q5VXU3 224 aa35.6■■■■□ 3.29
ABR-221ENST00000573559 SHROOM2Q13796 1616 aa35.5■■■■□ 3.27
ABR-221ENST00000573559 ARAP1Q96P48 1450 aa35.5■■■■□ 3.27
ABR-221ENST00000573559 RAPGEF2Q9Y4G8 1499 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms