RNA–Protein interactions for RNA: ENST00000571877.1

MPDU1-208, Transcript of mannose-P-dolichol utilization defect 1, humanhuman

TSL 1 (best)

Gene MPDU1, Length 1,195 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MPDU1-208ENST00000571877 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
MPDU1-208ENST00000571877 CCDC180Q9P1Z9 1646 aa29.92■■■□□ 2.38
MPDU1-208ENST00000571877 ABCC9O60706 1549 aa29.45■■■□□ 2.31
MPDU1-208ENST00000571877 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
MPDU1-208ENST00000571877 NACADO15069 1562 aa28.23■■■□□ 2.11
MPDU1-208ENST00000571877 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
MPDU1-208ENST00000571877 MYO15BQ96JP2 1530 aa28.04■■■□□ 2.08
MPDU1-208ENST00000571877 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.06
MPDU1-208ENST00000571877 DCAF1Q9Y4B6 1507 aa27.84■■■□□ 2.05
MPDU1-208ENST00000571877 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 2
MPDU1-208ENST00000571877 UNC13AQ9UPW8 1703 aa27.48■■□□□ 1.99
MPDU1-208ENST00000571877 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
MPDU1-208ENST00000571877 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
MPDU1-208ENST00000571877 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
MPDU1-208ENST00000571877 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
MPDU1-208ENST00000571877 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
MPDU1-208ENST00000571877 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
MPDU1-208ENST00000571877 CECR2Q9BXF3 1484 aa26.51■■□□□ 1.83
MPDU1-208ENST00000571877 SMARCA4P51532 1647 aa26.08■■□□□ 1.77
MPDU1-208ENST00000571877 NCAPD3P42695 1498 aa26.08■■□□□ 1.77
MPDU1-208ENST00000571877 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
MPDU1-208ENST00000571877 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
MPDU1-208ENST00000571877 SMARCA2P51531 1590 aa26■■□□□ 1.75
MPDU1-208ENST00000571877 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
MPDU1-208ENST00000571877 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
MPDU1-208ENST00000571877 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
MPDU1-208ENST00000571877 BAZ1BQ9UIG0 1483 aaKnown RBP25.8■■□□□ 1.72
MPDU1-208ENST00000571877 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
MPDU1-208ENST00000571877 WIZO95785 1651 aa25.55■■□□□ 1.68
MPDU1-208ENST00000571877 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
MPDU1-208ENST00000571877 NESP48681 1621 aa25.41■■□□□ 1.66
MPDU1-208ENST00000571877 LAMC3Q9Y6N6 1575 aa25.37■■□□□ 1.65
MPDU1-208ENST00000571877 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
MPDU1-208ENST00000571877 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
MPDU1-208ENST00000571877 PDS5BQ9NTI5 1447 aa25.27■■□□□ 1.64
MPDU1-208ENST00000571877 CUX2O14529 1486 aa25.24■■□□□ 1.63
MPDU1-208ENST00000571877 CFTRP13569 1480 aa25.1■■□□□ 1.61
MPDU1-208ENST00000571877 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
MPDU1-208ENST00000571877 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
MPDU1-208ENST00000571877 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
MPDU1-208ENST00000571877 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
MPDU1-208ENST00000571877 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
MPDU1-208ENST00000571877 MRC2Q9UBG0 1479 aa24.96■■□□□ 1.59
MPDU1-208ENST00000571877 WDR62O43379 1518 aa24.86■■□□□ 1.57
MPDU1-208ENST00000571877 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
MPDU1-208ENST00000571877 PRDM2Q13029 1718 aa24.76■■□□□ 1.55
MPDU1-208ENST00000571877 URB2Q14146 1524 aaKnown RBP24.71■■□□□ 1.55
MPDU1-208ENST00000571877 DNAJC5Q9H3Z4 198 aa24.71■■□□□ 1.55
MPDU1-208ENST00000571877 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
MPDU1-208ENST00000571877 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
MPDU1-208ENST00000571877 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
MPDU1-208ENST00000571877 IFT140Q96RY7 1462 aa24.47■■□□□ 1.51
MPDU1-208ENST00000571877 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
MPDU1-208ENST00000571877 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
MPDU1-208ENST00000571877 SOGA1O94964 1423 aa24.28■■□□□ 1.48
MPDU1-208ENST00000571877 CUX1P39880 1505 aa24.28■■□□□ 1.48
MPDU1-208ENST00000571877 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
MPDU1-208ENST00000571877 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
MPDU1-208ENST00000571877 OSCARQ8IYS5 282 aa24.23■■□□□ 1.47
MPDU1-208ENST00000571877 RAD54L2Q9Y4B4 1467 aa24.21■■□□□ 1.47
MPDU1-208ENST00000571877 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.462e-8■■■■■ 33.4
MPDU1-208ENST00000571877 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
MPDU1-208ENST00000571877 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
MPDU1-208ENST00000571877 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
MPDU1-208ENST00000571877 WDR97A6NE52 1622 aa24.11■■□□□ 1.45
MPDU1-208ENST00000571877 TOP2BQ02880 1626 aa24.04■■□□□ 1.44
MPDU1-208ENST00000571877 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
MPDU1-208ENST00000571877 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
MPDU1-208ENST00000571877 GRIN2BQ13224 1484 aa24■■□□□ 1.43
MPDU1-208ENST00000571877 FBLN2P98095 1184 aa23.99■■□□□ 1.43
MPDU1-208ENST00000571877 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
MPDU1-208ENST00000571877 GAPVD1Q14C86 1478 aa23.97■■□□□ 1.43
MPDU1-208ENST00000571877 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
MPDU1-208ENST00000571877 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
MPDU1-208ENST00000571877 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
MPDU1-208ENST00000571877 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
MPDU1-208ENST00000571877 CHD1O14646 1710 aa23.87■■□□□ 1.41
MPDU1-208ENST00000571877 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
MPDU1-208ENST00000571877 PBRM1Q86U86 1689 aa23.82■■□□□ 1.4
MPDU1-208ENST00000571877 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
MPDU1-208ENST00000571877 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
MPDU1-208ENST00000571877 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
MPDU1-208ENST00000571877 RIMBP3CA6NJZ7 1639 aa23.71■■□□□ 1.39
MPDU1-208ENST00000571877 RIMBP3BA6NNM3 1639 aa23.71■■□□□ 1.39
MPDU1-208ENST00000571877 RIMBP3Q9UFD9 1639 aa23.71■■□□□ 1.39
MPDU1-208ENST00000571877 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
MPDU1-208ENST00000571877 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
MPDU1-208ENST00000571877 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
MPDU1-208ENST00000571877 ADAMTS12P58397 1594 aa23.66■■□□□ 1.38
MPDU1-208ENST00000571877 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
MPDU1-208ENST00000571877 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
MPDU1-208ENST00000571877 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
MPDU1-208ENST00000571877 NUP160Q12769 1436 aa23.59■■□□□ 1.37
MPDU1-208ENST00000571877 IGF1RP08069 1367 aa23.58■■□□□ 1.37
MPDU1-208ENST00000571877 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
MPDU1-208ENST00000571877 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
MPDU1-208ENST00000571877 CUL7Q14999 1698 aa23.45■■□□□ 1.34
MPDU1-208ENST00000571877 CARMIL1Q5VZK9 1371 aa23.44■■□□□ 1.34
MPDU1-208ENST00000571877 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
MPDU1-208ENST00000571877 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms