RNA–Protein interactions for RNA: ENST00000571539.1

CLUH-203, Transcript of clustered mitochondria homolog, humanhuman

TSL 2

Gene CLUH, Length 237 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUH-203ENST00000571539 NISCHQ9Y2I1 1504 aa12.87□□□□□ -0.35
CLUH-203ENST00000571539 ABCC9O60706 1549 aa11.92□□□□□ -0.5
CLUH-203ENST00000571539 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
CLUH-203ENST00000571539 DNAJC5BQ9UF47 199 aa11.39□□□□□ -0.59
CLUH-203ENST00000571539 UNC13AQ9UPW8 1703 aa11.25□□□□□ -0.61
CLUH-203ENST00000571539 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
CLUH-203ENST00000571539 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLUH-203ENST00000571539 BICRAQ9NZM4 1560 aa11□□□□□ -0.65
CLUH-203ENST00000571539 NACADO15069 1562 aa10.98□□□□□ -0.65
CLUH-203ENST00000571539 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
CLUH-203ENST00000571539 CC2D2AQ9P2K1 1620 aa10.78□□□□□ -0.68
CLUH-203ENST00000571539 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
CLUH-203ENST00000571539 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
CLUH-203ENST00000571539 MYO15BQ96JP2 1530 aa10.66□□□□□ -0.7
CLUH-203ENST00000571539 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.7
CLUH-203ENST00000571539 ZCCHC6Q5VYS8 1495 aaKnown RBP10.64□□□□□ -0.71
CLUH-203ENST00000571539 DCAF1Q9Y4B6 1507 aa10.5□□□□□ -0.73
CLUH-203ENST00000571539 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
CLUH-203ENST00000571539 DNAJC5Q9H3Z4 198 aa10.39□□□□□ -0.75
CLUH-203ENST00000571539 NESP48681 1621 aa10.25□□□□□ -0.77
CLUH-203ENST00000571539 KIF21AQ7Z4S6 1674 aa10.2□□□□□ -0.78
CLUH-203ENST00000571539 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
CLUH-203ENST00000571539 ERCC6Q03468 1493 aa10.19□□□□□ -0.78
CLUH-203ENST00000571539 CUX2O14529 1486 aa10.18□□□□□ -0.78
CLUH-203ENST00000571539 SMARCA4P51532 1647 aa10.17□□□□□ -0.78
CLUH-203ENST00000571539 ATAD2BQ9ULI0 1458 aa10.13□□□□□ -0.79
CLUH-203ENST00000571539 SMARCA2P51531 1590 aa10.13□□□□□ -0.79
CLUH-203ENST00000571539 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
CLUH-203ENST00000571539 HMGXB3Q12766 1538 aa10.08□□□□□ -0.8
CLUH-203ENST00000571539 MROH2BQ7Z745 1585 aa10.01□□□□□ -0.81
CLUH-203ENST00000571539 BAZ1BQ9UIG0 1483 aaKnown RBP10.01□□□□□ -0.81
CLUH-203ENST00000571539 LAMC3Q9Y6N6 1575 aa9.97□□□□□ -0.81
CLUH-203ENST00000571539 WIZO95785 1651 aa9.97□□□□□ -0.81
CLUH-203ENST00000571539 TRIM41Q8WV44 630 aa9.97□□□□□ -0.81
CLUH-203ENST00000571539 PEG3Q9GZU2 1588 aa9.97□□□□□ -0.81
CLUH-203ENST00000571539 BAZ1AQ9NRL2 1556 aaPredicted RBP9.96□□□□□ -0.82
CLUH-203ENST00000571539 WDR62O43379 1518 aa9.89□□□□□ -0.83
CLUH-203ENST00000571539 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
CLUH-203ENST00000571539 PRDM2Q13029 1718 aa9.81□□□□□ -0.84
CLUH-203ENST00000571539 RIMBP3CA6NJZ7 1639 aa9.8□□□□□ -0.84
CLUH-203ENST00000571539 RIMBP3BA6NNM3 1639 aa9.8□□□□□ -0.84
CLUH-203ENST00000571539 RIMBP3Q9UFD9 1639 aa9.8□□□□□ -0.84
CLUH-203ENST00000571539 PDS5BQ9NTI5 1447 aa9.8□□□□□ -0.84
CLUH-203ENST00000571539 URB2Q14146 1524 aaKnown RBP9.78□□□□□ -0.84
CLUH-203ENST00000571539 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.84
CLUH-203ENST00000571539 CEP164Q9UPV0 1460 aa9.77□□□□□ -0.85
CLUH-203ENST00000571539 FANCD2Q9BXW9 1451 aa9.76□□□□□ -0.85
CLUH-203ENST00000571539 CHD1O14646 1710 aa9.74□□□□□ -0.85
CLUH-203ENST00000571539 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
CLUH-203ENST00000571539 EIF4G3O43432 1585 aaKnown RBP9.67□□□□□ -0.86
CLUH-203ENST00000571539 TOP2AP11388 1531 aaKnown RBP9.67□□□□□ -0.86
CLUH-203ENST00000571539 CFTRP13569 1480 aa9.67□□□□□ -0.86
CLUH-203ENST00000571539 ARHGEF11O15085 1522 aa9.66□□□□□ -0.86
CLUH-203ENST00000571539 RSF1Q96T23 1441 aaPredicted RBP9.63□□□□□ -0.87
CLUH-203ENST00000571539 OSCARQ8IYS5 282 aa9.6□□□□□ -0.87
CLUH-203ENST00000571539 TOPBP1Q92547 1522 aa9.6□□□□□ -0.87
CLUH-203ENST00000571539 TARBP1Q13395 1621 aaKnown RBP9.6□□□□□ -0.87
CLUH-203ENST00000571539 ARAP1Q96P48 1450 aa9.58□□□□□ -0.88
CLUH-203ENST00000571539 CCDC88BA6NC98 1476 aa9.57□□□□□ -0.88
CLUH-203ENST00000571539 DNMBPQ6XZF7 1577 aa9.54□□□□□ -0.88
CLUH-203ENST00000571539 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.882e-11■■■■■ 42.9
CLUH-203ENST00000571539 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
CLUH-203ENST00000571539 RAD54L2Q9Y4B4 1467 aa9.51□□□□□ -0.89
CLUH-203ENST00000571539 WDR97A6NE52 1622 aa9.5□□□□□ -0.89
CLUH-203ENST00000571539 CYB5RLQ6IPT4 315 aa9.5□□□□□ -0.89
CLUH-203ENST00000571539 PBRM1Q86U86 1689 aa9.48□□□□□ -0.89
CLUH-203ENST00000571539 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
CLUH-203ENST00000571539 CLASP1Q7Z460 1538 aa9.47□□□□□ -0.89
CLUH-203ENST00000571539 ERCC6L2Q5T890 1561 aa9.46□□□□□ -0.9
CLUH-203ENST00000571539 TRHP20396 242 aaPredicted RBP9.44□□□□□ -0.9
CLUH-203ENST00000571539 SNAPC4Q5SXM2 1469 aa9.44□□□□□ -0.9
CLUH-203ENST00000571539 TDRD9Q8NDG6 1382 aaKnown RBP9.42□□□□□ -0.9
CLUH-203ENST00000571539 FBLN2P98095 1184 aa9.42□□□□□ -0.9
CLUH-203ENST00000571539 CUX1P39880 1505 aa9.41□□□□□ -0.9
CLUH-203ENST00000571539 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.9
CLUH-203ENST00000571539 KIF13AQ9H1H9 1805 aa9.4□□□□□ -0.91
CLUH-203ENST00000571539 SYNJ1O43426 1573 aa9.36□□□□□ -0.91
CLUH-203ENST00000571539 ABCA5Q8WWZ7 1642 aa9.35□□□□□ -0.91
CLUH-203ENST00000571539 ABCC8Q09428 1581 aa9.34□□□□□ -0.91
CLUH-203ENST00000571539 SOGA1O94964 1423 aa9.34□□□□□ -0.91
CLUH-203ENST00000571539 CEP170Q5SW79 1584 aa9.33□□□□□ -0.92
CLUH-203ENST00000571539 GAPVD1Q14C86 1478 aa9.3□□□□□ -0.92
CLUH-203ENST00000571539 MAGI1Q96QZ7 1491 aaPredicted RBP9.29□□□□□ -0.92
CLUH-203ENST00000571539 ADAMTS12P58397 1594 aa9.29□□□□□ -0.92
CLUH-203ENST00000571539 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
CLUH-203ENST00000571539 GRIN2BQ13224 1484 aa9.28□□□□□ -0.92
CLUH-203ENST00000571539 TSPOAP1O95153 1857 aa9.27□□□□□ -0.93
CLUH-203ENST00000571539 SHROOM2Q13796 1616 aa9.27□□□□□ -0.93
CLUH-203ENST00000571539 CHMP7Q8WUX9 453 aaPredicted RBP9.24□□□□□ -0.93
CLUH-203ENST00000571539 AEBP2Q6ZN18 517 aaPredicted RBP9.23□□□□□ -0.93
CLUH-203ENST00000571539 GRIN2AQ12879 1464 aa9.22□□□□□ -0.93
CLUH-203ENST00000571539 BIVM-ERCC5R4GMW8 1640 aa9.22□□□□□ -0.93
CLUH-203ENST00000571539 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.93
CLUH-203ENST00000571539 ADCY10Q96PN6 1610 aa9.17□□□□□ -0.94
CLUH-203ENST00000571539 RUSC2Q8N2Y8 1516 aa9.17□□□□□ -0.94
CLUH-203ENST00000571539 NUP160Q12769 1436 aa9.17□□□□□ -0.94
CLUH-203ENST00000571539 TOP2BQ02880 1626 aa9.16□□□□□ -0.94
CLUH-203ENST00000571539 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
CLUH-203ENST00000571539 PPRC1Q5VV67 1664 aaKnown RBP9.13□□□□□ -0.95
CLUH-203ENST00000571539 KDM6BO15054 1643 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms