RNA–Protein interactions for RNA: ENST00000571338.1

NXN-205, Transcript of nucleoredoxin, humanhuman

TSL 4

Gene NXN, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXN-205ENST00000571338 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
NXN-205ENST00000571338 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
NXN-205ENST00000571338 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
NXN-205ENST00000571338 ABCC9O60706 1549 aa20.63■□□□□ 0.89
NXN-205ENST00000571338 CCDC180Q9P1Z9 1646 aa20.21■□□□□ 0.83
NXN-205ENST00000571338 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
NXN-205ENST00000571338 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
NXN-205ENST00000571338 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
NXN-205ENST00000571338 NACADO15069 1562 aa19.16■□□□□ 0.66
NXN-205ENST00000571338 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
NXN-205ENST00000571338 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
NXN-205ENST00000571338 DCAF8L2P0C7V8 631 aa18.8■□□□□ 0.6
NXN-205ENST00000571338 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
NXN-205ENST00000571338 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
NXN-205ENST00000571338 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
NXN-205ENST00000571338 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
NXN-205ENST00000571338 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
NXN-205ENST00000571338 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
NXN-205ENST00000571338 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
NXN-205ENST00000571338 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
NXN-205ENST00000571338 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
NXN-205ENST00000571338 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
NXN-205ENST00000571338 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
NXN-205ENST00000571338 CUX2O14529 1486 aa18.02■□□□□ 0.48
NXN-205ENST00000571338 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
NXN-205ENST00000571338 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
NXN-205ENST00000571338 NESP48681 1621 aa17.59■□□□□ 0.41
NXN-205ENST00000571338 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
NXN-205ENST00000571338 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
NXN-205ENST00000571338 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
NXN-205ENST00000571338 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
NXN-205ENST00000571338 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
NXN-205ENST00000571338 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
NXN-205ENST00000571338 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
NXN-205ENST00000571338 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
NXN-205ENST00000571338 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
NXN-205ENST00000571338 FOXD1Q16676 465 aa17.39■□□□□ 0.37
NXN-205ENST00000571338 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
NXN-205ENST00000571338 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
NXN-205ENST00000571338 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
NXN-205ENST00000571338 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
NXN-205ENST00000571338 WDR62O43379 1518 aa17.17■□□□□ 0.34
NXN-205ENST00000571338 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
NXN-205ENST00000571338 CADPSQ9ULU8 1353 aa17.05■□□□□ 0.32
NXN-205ENST00000571338 MROH2BQ7Z745 1585 aa17.05■□□□□ 0.32
NXN-205ENST00000571338 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
NXN-205ENST00000571338 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
NXN-205ENST00000571338 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
NXN-205ENST00000571338 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
NXN-205ENST00000571338 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
NXN-205ENST00000571338 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
NXN-205ENST00000571338 WIZO95785 1651 aa16.88■□□□□ 0.29
NXN-205ENST00000571338 ARHGEF11O15085 1522 aa16.85■□□□□ 0.29
NXN-205ENST00000571338 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
NXN-205ENST00000571338 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
NXN-205ENST00000571338 CFTRP13569 1480 aa16.78■□□□□ 0.28
NXN-205ENST00000571338 CHD1O14646 1710 aa16.7■□□□□ 0.26
NXN-205ENST00000571338 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
NXN-205ENST00000571338 CYB5RLQ6IPT4 315 aa16.67■□□□□ 0.26
NXN-205ENST00000571338 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
NXN-205ENST00000571338 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
NXN-205ENST00000571338 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
NXN-205ENST00000571338 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
NXN-205ENST00000571338 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
NXN-205ENST00000571338 ADRA2BP18089 450 aa16.59■□□□□ 0.25
NXN-205ENST00000571338 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
NXN-205ENST00000571338 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
NXN-205ENST00000571338 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
NXN-205ENST00000571338 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
NXN-205ENST00000571338 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
NXN-205ENST00000571338 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
NXN-205ENST00000571338 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
NXN-205ENST00000571338 PIAS4Q8N2W9 510 aaPredicted RBP16.4■□□□□ 0.22
NXN-205ENST00000571338 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
NXN-205ENST00000571338 FBLN2P98095 1184 aa16.38■□□□□ 0.21
NXN-205ENST00000571338 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
NXN-205ENST00000571338 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
NXN-205ENST00000571338 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
NXN-205ENST00000571338 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
NXN-205ENST00000571338 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
NXN-205ENST00000571338 RAD54L2Q9Y4B4 1467 aa16.26■□□□□ 0.19
NXN-205ENST00000571338 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
NXN-205ENST00000571338 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
NXN-205ENST00000571338 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
NXN-205ENST00000571338 KIF13AQ9H1H9 1805 aa16.2■□□□□ 0.18
NXN-205ENST00000571338 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
NXN-205ENST00000571338 SOGA1O94964 1423 aa16.19■□□□□ 0.18
NXN-205ENST00000571338 CHMP7Q8WUX9 453 aaPredicted RBP16.18■□□□□ 0.18
NXN-205ENST00000571338 MSH5O43196 834 aa16.17■□□□□ 0.18
NXN-205ENST00000571338 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
NXN-205ENST00000571338 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
NXN-205ENST00000571338 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
NXN-205ENST00000571338 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
NXN-205ENST00000571338 CUX1P39880 1505 aa16.06■□□□□ 0.16
NXN-205ENST00000571338 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
NXN-205ENST00000571338 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
NXN-205ENST00000571338 SHROOM2Q13796 1616 aa16■□□□□ 0.15
NXN-205ENST00000571338 ILDR1Q86SU0 546 aaPredicted RBP15.97■□□□□ 0.15
NXN-205ENST00000571338 GRIN2AQ12879 1464 aa15.96■□□□□ 0.14
NXN-205ENST00000571338 ABCA10Q8WWZ4 1543 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms