RNA–Protein interactions for RNA: ENST00000570356.1

ACSF2-225, Transcript of acyl-CoA synthetase family member 2, humanhuman

TSL 5

Gene ACSF2, Length 380 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF2-225ENST00000570356 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
ACSF2-225ENST00000570356 CCDC180Q9P1Z9 1646 aa34.33■■■■□ 3.09
ACSF2-225ENST00000570356 ABCC9O60706 1549 aa33.6■■■□□ 2.97
ACSF2-225ENST00000570356 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.76
ACSF2-225ENST00000570356 NACADO15069 1562 aa32.3■■■□□ 2.76
ACSF2-225ENST00000570356 ZCCHC6Q5VYS8 1495 aaKnown RBP32.24■■■□□ 2.75
ACSF2-225ENST00000570356 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
ACSF2-225ENST00000570356 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
ACSF2-225ENST00000570356 DCAF1Q9Y4B6 1507 aa32.02■■■□□ 2.72
ACSF2-225ENST00000570356 UNC13AQ9UPW8 1703 aa31.46■■■□□ 2.63
ACSF2-225ENST00000570356 PABPN1Q86U42 306 aaKnown RBP eCLIP31.37■■■□□ 2.61
ACSF2-225ENST00000570356 BICRAQ9NZM4 1560 aa31.37■■■□□ 2.61
ACSF2-225ENST00000570356 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
ACSF2-225ENST00000570356 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
ACSF2-225ENST00000570356 DNAJC5BQ9UF47 199 aa30.86■■■□□ 2.53
ACSF2-225ENST00000570356 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
ACSF2-225ENST00000570356 CC2D2AQ9P2K1 1620 aa30.38■■■□□ 2.45
ACSF2-225ENST00000570356 CECR2Q9BXF3 1484 aa30.22■■■□□ 2.43
ACSF2-225ENST00000570356 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
ACSF2-225ENST00000570356 BAZ1AQ9NRL2 1556 aaPredicted RBP29.95■■■□□ 2.39
ACSF2-225ENST00000570356 ATAD2BQ9ULI0 1458 aa29.85■■■□□ 2.37
ACSF2-225ENST00000570356 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
ACSF2-225ENST00000570356 SMARCA2P51531 1590 aa29.79■■■□□ 2.36
ACSF2-225ENST00000570356 MROH2BQ7Z745 1585 aa29.78■■■□□ 2.36
ACSF2-225ENST00000570356 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
ACSF2-225ENST00000570356 HMGXB3Q12766 1538 aa29.7■■■□□ 2.34
ACSF2-225ENST00000570356 BAZ1BQ9UIG0 1483 aaKnown RBP29.57■■■□□ 2.32
ACSF2-225ENST00000570356 RSF1Q96T23 1441 aaPredicted RBP29.46■■■□□ 2.31
ACSF2-225ENST00000570356 WIZO95785 1651 aa29.39■■■□□ 2.3
ACSF2-225ENST00000570356 TOP2AP11388 1531 aaKnown RBP29.16■■■□□ 2.26
ACSF2-225ENST00000570356 NESP48681 1621 aa29.08■■■□□ 2.25
ACSF2-225ENST00000570356 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
ACSF2-225ENST00000570356 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
ACSF2-225ENST00000570356 ERCC6Q03468 1493 aa28.96■■■□□ 2.23
ACSF2-225ENST00000570356 PDS5BQ9NTI5 1447 aa28.83■■■□□ 2.21
ACSF2-225ENST00000570356 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
ACSF2-225ENST00000570356 CFTRP13569 1480 aa28.8■■■□□ 2.2
ACSF2-225ENST00000570356 CUX2O14529 1486 aa28.7■■■□□ 2.18
ACSF2-225ENST00000570356 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
ACSF2-225ENST00000570356 KIF21AQ7Z4S6 1674 aa28.66■■■□□ 2.18
ACSF2-225ENST00000570356 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
ACSF2-225ENST00000570356 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
ACSF2-225ENST00000570356 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
ACSF2-225ENST00000570356 MRC2Q9UBG0 1479 aa28.55■■■□□ 2.16
ACSF2-225ENST00000570356 WDR62O43379 1518 aa28.47■■■□□ 2.15
ACSF2-225ENST00000570356 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
ACSF2-225ENST00000570356 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
ACSF2-225ENST00000570356 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
ACSF2-225ENST00000570356 ABCC8Q09428 1581 aa28.13■■■□□ 2.09
ACSF2-225ENST00000570356 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
ACSF2-225ENST00000570356 IFT140Q96RY7 1462 aa27.99■■■□□ 2.07
ACSF2-225ENST00000570356 CUX1P39880 1505 aa27.94■■■□□ 2.06
ACSF2-225ENST00000570356 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
ACSF2-225ENST00000570356 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
ACSF2-225ENST00000570356 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
ACSF2-225ENST00000570356 TARBP1Q13395 1621 aaKnown RBP27.83■■■□□ 2.05
ACSF2-225ENST00000570356 DNAJC5Q9H3Z4 198 aa27.79■■■□□ 2.04
ACSF2-225ENST00000570356 RAD54L2Q9Y4B4 1467 aa27.78■■■□□ 2.04
ACSF2-225ENST00000570356 SOGA1O94964 1423 aa27.77■■■□□ 2.04
ACSF2-225ENST00000570356 WRNQ14191 1432 aaPredicted RBP eCLIP27.76■■■□□ 2.04
ACSF2-225ENST00000570356 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
ACSF2-225ENST00000570356 TOP2BQ02880 1626 aa27.68■■■□□ 2.02
ACSF2-225ENST00000570356 AQRO60306 1485 aaKnown RBP eCLIP27.68■■■□□ 2.02
ACSF2-225ENST00000570356 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
ACSF2-225ENST00000570356 BIVM-ERCC5R4GMW8 1640 aa27.66■■■□□ 2.02
ACSF2-225ENST00000570356 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
ACSF2-225ENST00000570356 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
ACSF2-225ENST00000570356 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
ACSF2-225ENST00000570356 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
ACSF2-225ENST00000570356 ABCA5Q8WWZ7 1642 aa27.47■■□□□ 1.99
ACSF2-225ENST00000570356 GAPVD1Q14C86 1478 aa27.46■■□□□ 1.99
ACSF2-225ENST00000570356 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
ACSF2-225ENST00000570356 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
ACSF2-225ENST00000570356 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
ACSF2-225ENST00000570356 PBRM1Q86U86 1689 aa27.33■■□□□ 1.97
ACSF2-225ENST00000570356 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
ACSF2-225ENST00000570356 CHD1O14646 1710 aa27.29■■□□□ 1.96
ACSF2-225ENST00000570356 FBLN2P98095 1184 aa27.28■■□□□ 1.96
ACSF2-225ENST00000570356 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
ACSF2-225ENST00000570356 CHMP7Q8WUX9 453 aaPredicted RBP27.24■■□□□ 1.95
ACSF2-225ENST00000570356 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
ACSF2-225ENST00000570356 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
ACSF2-225ENST00000570356 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
ACSF2-225ENST00000570356 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
ACSF2-225ENST00000570356 CLASP1Q7Z460 1538 aa27.12■■□□□ 1.93
ACSF2-225ENST00000570356 IGF1RP08069 1367 aa27.08■■□□□ 1.93
ACSF2-225ENST00000570356 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
ACSF2-225ENST00000570356 NUP160Q12769 1436 aa27.05■■□□□ 1.92
ACSF2-225ENST00000570356 TRIM41Q8WV44 630 aa27.03■■□□□ 1.92
ACSF2-225ENST00000570356 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
ACSF2-225ENST00000570356 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
ACSF2-225ENST00000570356 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
ACSF2-225ENST00000570356 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
ACSF2-225ENST00000570356 CUL7Q14999 1698 aa26.96■■□□□ 1.91
ACSF2-225ENST00000570356 RUSC2Q8N2Y8 1516 aa26.9■■□□□ 1.9
ACSF2-225ENST00000570356 CARMIL1Q5VZK9 1371 aa26.89■■□□□ 1.9
ACSF2-225ENST00000570356 ARAP1Q96P48 1450 aa26.86■■□□□ 1.89
ACSF2-225ENST00000570356 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
ACSF2-225ENST00000570356 KIAA0586Q9BVV6 1533 aa26.75■■□□□ 1.87
ACSF2-225ENST00000570356 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms