RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
TCF4-244ENST00000570146 NISCHQ9Y2I1 1504 aa26.16■■□□□ 1.78
TCF4-244ENST00000570146 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
TCF4-244ENST00000570146 ABCC9O60706 1549 aa24.25■■□□□ 1.47
TCF4-244ENST00000570146 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
TCF4-244ENST00000570146 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
TCF4-244ENST00000570146 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
TCF4-244ENST00000570146 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
TCF4-244ENST00000570146 NACADO15069 1562 aa22.58■■□□□ 1.2
TCF4-244ENST00000570146 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
TCF4-244ENST00000570146 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
TCF4-244ENST00000570146 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
TCF4-244ENST00000570146 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
TCF4-244ENST00000570146 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
TCF4-244ENST00000570146 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
TCF4-244ENST00000570146 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
TCF4-244ENST00000570146 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
TCF4-244ENST00000570146 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
TCF4-244ENST00000570146 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
TCF4-244ENST00000570146 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
TCF4-244ENST00000570146 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
TCF4-244ENST00000570146 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
TCF4-244ENST00000570146 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
TCF4-244ENST00000570146 FOXD1Q16676 465 aa21.4■■□□□ 1.02
TCF4-244ENST00000570146 CUX2O14529 1486 aa21.19■□□□□ 0.98
TCF4-244ENST00000570146 ERCC6Q03468 1493 aa21.08■□□□□ 0.97
TCF4-244ENST00000570146 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
TCF4-244ENST00000570146 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
TCF4-244ENST00000570146 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
TCF4-244ENST00000570146 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
TCF4-244ENST00000570146 NESP48681 1621 aa20.63■□□□□ 0.89
TCF4-244ENST00000570146 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
TCF4-244ENST00000570146 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
TCF4-244ENST00000570146 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
TCF4-244ENST00000570146 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
TCF4-244ENST00000570146 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
TCF4-244ENST00000570146 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
TCF4-244ENST00000570146 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
TCF4-244ENST00000570146 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
TCF4-244ENST00000570146 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
TCF4-244ENST00000570146 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
TCF4-244ENST00000570146 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
TCF4-244ENST00000570146 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
TCF4-244ENST00000570146 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
TCF4-244ENST00000570146 MSH5O43196 834 aa20.19■□□□□ 0.82
TCF4-244ENST00000570146 WDR62O43379 1518 aa20.17■□□□□ 0.82
TCF4-244ENST00000570146 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
TCF4-244ENST00000570146 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
TCF4-244ENST00000570146 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
TCF4-244ENST00000570146 FANCD2Q9BXW9 1451 aa19.98■□□□□ 0.79
TCF4-244ENST00000570146 PIAS4Q8N2W9 510 aaPredicted RBP19.95■□□□□ 0.78
TCF4-244ENST00000570146 CFTRP13569 1480 aa19.85■□□□□ 0.77
TCF4-244ENST00000570146 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
TCF4-244ENST00000570146 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
TCF4-244ENST00000570146 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
TCF4-244ENST00000570146 WIZO95785 1651 aa19.8■□□□□ 0.76
TCF4-244ENST00000570146 URB2Q14146 1524 aaKnown RBP19.78■□□□□ 0.76
TCF4-244ENST00000570146 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
TCF4-244ENST00000570146 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
TCF4-244ENST00000570146 CYB5RLQ6IPT4 315 aa19.74■□□□□ 0.75
TCF4-244ENST00000570146 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
TCF4-244ENST00000570146 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
TCF4-244ENST00000570146 ADRA2BP18089 450 aa19.66■□□□□ 0.74
TCF4-244ENST00000570146 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
TCF4-244ENST00000570146 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
TCF4-244ENST00000570146 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
TCF4-244ENST00000570146 FBLN2P98095 1184 aa19.53■□□□□ 0.72
TCF4-244ENST00000570146 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
TCF4-244ENST00000570146 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
TCF4-244ENST00000570146 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
TCF4-244ENST00000570146 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
TCF4-244ENST00000570146 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.7
TCF4-244ENST00000570146 PRDM2Q13029 1718 aa19.43■□□□□ 0.7
TCF4-244ENST00000570146 CCDC88BA6NC98 1476 aa19.38■□□□□ 0.69
TCF4-244ENST00000570146 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
TCF4-244ENST00000570146 CHD1O14646 1710 aa19.37■□□□□ 0.69
TCF4-244ENST00000570146 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
TCF4-244ENST00000570146 TARBP1Q13395 1621 aaKnown RBP19.3■□□□□ 0.68
TCF4-244ENST00000570146 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.67
TCF4-244ENST00000570146 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
TCF4-244ENST00000570146 SOGA1O94964 1423 aa19.25■□□□□ 0.67
TCF4-244ENST00000570146 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
TCF4-244ENST00000570146 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
TCF4-244ENST00000570146 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
TCF4-244ENST00000570146 RAD54L2Q9Y4B4 1467 aa19.2■□□□□ 0.66
TCF4-244ENST00000570146 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
TCF4-244ENST00000570146 WDR97A6NE52 1622 aa19.17■□□□□ 0.66
TCF4-244ENST00000570146 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
TCF4-244ENST00000570146 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
TCF4-244ENST00000570146 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
TCF4-244ENST00000570146 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.64
TCF4-244ENST00000570146 CUX1P39880 1505 aa18.94■□□□□ 0.62
TCF4-244ENST00000570146 PBRM1Q86U86 1689 aa18.86■□□□□ 0.61
TCF4-244ENST00000570146 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
TCF4-244ENST00000570146 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
TCF4-244ENST00000570146 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
TCF4-244ENST00000570146 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
TCF4-244ENST00000570146 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.6
TCF4-244ENST00000570146 NUP160Q12769 1436 aa18.8■□□□□ 0.6
TCF4-244ENST00000570146 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms