RNA–Protein interactions for RNA: ENST00000570127.1

LINC01225-205, Transcript of LINC01225 pseudogene, humanhuman

TSL 1 (best)

Gene LINC01225, Length 844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-205ENST00000570127 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
LINC01225-205ENST00000570127 CCDC180Q9P1Z9 1646 aa27.16■■□□□ 1.94
LINC01225-205ENST00000570127 ABCC9O60706 1549 aa27.06■■□□□ 1.92
LINC01225-205ENST00000570127 RB1CC1Q8TDY2 1594 aa25.75■■□□□ 1.71
LINC01225-205ENST00000570127 NACADO15069 1562 aa25.59■■□□□ 1.69
LINC01225-205ENST00000570127 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
LINC01225-205ENST00000570127 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
LINC01225-205ENST00000570127 ZCCHC6Q5VYS8 1495 aaKnown RBP25.33■■□□□ 1.65
LINC01225-205ENST00000570127 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
LINC01225-205ENST00000570127 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
LINC01225-205ENST00000570127 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
LINC01225-205ENST00000570127 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
LINC01225-205ENST00000570127 DCAF1Q9Y4B6 1507 aa25.01■■□□□ 1.59
LINC01225-205ENST00000570127 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
LINC01225-205ENST00000570127 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
LINC01225-205ENST00000570127 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
LINC01225-205ENST00000570127 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
LINC01225-205ENST00000570127 CECR2Q9BXF3 1484 aa24.31■■□□□ 1.48
LINC01225-205ENST00000570127 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
LINC01225-205ENST00000570127 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
LINC01225-205ENST00000570127 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
LINC01225-205ENST00000570127 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
LINC01225-205ENST00000570127 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
LINC01225-205ENST00000570127 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
LINC01225-205ENST00000570127 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
LINC01225-205ENST00000570127 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
LINC01225-205ENST00000570127 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
LINC01225-205ENST00000570127 NESP48681 1621 aa23.33■■□□□ 1.32
LINC01225-205ENST00000570127 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
LINC01225-205ENST00000570127 WIZO95785 1651 aa23.26■■□□□ 1.31
LINC01225-205ENST00000570127 RSF1Q96T23 1441 aaPredicted RBP23.18■■□□□ 1.3
LINC01225-205ENST00000570127 CUX2O14529 1486 aa23.17■■□□□ 1.3
LINC01225-205ENST00000570127 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
LINC01225-205ENST00000570127 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
LINC01225-205ENST00000570127 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
LINC01225-205ENST00000570127 SUPT5HO00267 1087 aaKnown RBP23.05■■□□□ 1.28
LINC01225-205ENST00000570127 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
LINC01225-205ENST00000570127 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
LINC01225-205ENST00000570127 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.26
LINC01225-205ENST00000570127 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
LINC01225-205ENST00000570127 MRC2Q9UBG0 1479 aa22.75■■□□□ 1.23
LINC01225-205ENST00000570127 WDR62O43379 1518 aa22.72■■□□□ 1.23
LINC01225-205ENST00000570127 CFTRP13569 1480 aa22.7■■□□□ 1.22
LINC01225-205ENST00000570127 FANCD2Q9BXW9 1451 aa22.68■■□□□ 1.22
LINC01225-205ENST00000570127 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
LINC01225-205ENST00000570127 CCDC88BA6NC98 1476 aa22.61■■□□□ 1.21
LINC01225-205ENST00000570127 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
LINC01225-205ENST00000570127 URB2Q14146 1524 aaKnown RBP22.54■■□□□ 1.2
LINC01225-205ENST00000570127 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
LINC01225-205ENST00000570127 ZNF608Q9ULD9 1512 aaPredicted RBP22.25■■□□□ 1.15
LINC01225-205ENST00000570127 DNMBPQ6XZF7 1577 aa22.22■■□□□ 1.15
LINC01225-205ENST00000570127 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
LINC01225-205ENST00000570127 EIF4G3O43432 1585 aaKnown RBP22.15■■□□□ 1.14
LINC01225-205ENST00000570127 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
LINC01225-205ENST00000570127 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
LINC01225-205ENST00000570127 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
LINC01225-205ENST00000570127 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
LINC01225-205ENST00000570127 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.12
LINC01225-205ENST00000570127 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
LINC01225-205ENST00000570127 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
LINC01225-205ENST00000570127 CUX1P39880 1505 aa22■■□□□ 1.11
LINC01225-205ENST00000570127 CHD1O14646 1710 aa21.99■■□□□ 1.11
LINC01225-205ENST00000570127 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
LINC01225-205ENST00000570127 RIMBP3CA6NJZ7 1639 aa21.94■■□□□ 1.1
LINC01225-205ENST00000570127 RIMBP3BA6NNM3 1639 aa21.94■■□□□ 1.1
LINC01225-205ENST00000570127 RIMBP3Q9UFD9 1639 aa21.94■■□□□ 1.1
LINC01225-205ENST00000570127 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
LINC01225-205ENST00000570127 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
LINC01225-205ENST00000570127 SOGA1O94964 1423 aa21.91■■□□□ 1.1
LINC01225-205ENST00000570127 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
LINC01225-205ENST00000570127 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
LINC01225-205ENST00000570127 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
LINC01225-205ENST00000570127 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
LINC01225-205ENST00000570127 ARHGEF11O15085 1522 aa21.85■■□□□ 1.09
LINC01225-205ENST00000570127 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
LINC01225-205ENST00000570127 FBLN2P98095 1184 aa21.78■■□□□ 1.08
LINC01225-205ENST00000570127 PBRM1Q86U86 1689 aa21.76■■□□□ 1.07
LINC01225-205ENST00000570127 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
LINC01225-205ENST00000570127 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
LINC01225-205ENST00000570127 MAGI1Q96QZ7 1491 aaPredicted RBP21.7■■□□□ 1.06
LINC01225-205ENST00000570127 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
LINC01225-205ENST00000570127 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
LINC01225-205ENST00000570127 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
LINC01225-205ENST00000570127 ARAP1Q96P48 1450 aa21.67■■□□□ 1.06
LINC01225-205ENST00000570127 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
LINC01225-205ENST00000570127 SYNJ2O15056 1496 aa21.64■■□□□ 1.05
LINC01225-205ENST00000570127 CYB5RLQ6IPT4 315 aa21.61■■□□□ 1.05
LINC01225-205ENST00000570127 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
LINC01225-205ENST00000570127 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
LINC01225-205ENST00000570127 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
LINC01225-205ENST00000570127 CEP170Q5SW79 1584 aa21.46■■□□□ 1.03
LINC01225-205ENST00000570127 ERCC6L2Q5T890 1561 aa21.43■■□□□ 1.02
LINC01225-205ENST00000570127 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
LINC01225-205ENST00000570127 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.01
LINC01225-205ENST00000570127 NUP160Q12769 1436 aa21.38■■□□□ 1.01
LINC01225-205ENST00000570127 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
LINC01225-205ENST00000570127 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
LINC01225-205ENST00000570127 SHROOM2Q13796 1616 aa21.33■■□□□ 1
LINC01225-205ENST00000570127 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
LINC01225-205ENST00000570127 CUL7Q14999 1698 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms