RNA–Protein interactions for RNA: ENST00000569885.6

GCSH-206, Transcript of glycine cleavage system protein H, humanhuman

TSL 3

Gene GCSH, Length 647 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-206ENST00000569885 NISCHQ9Y2I1 1504 aa39.26■■■■□ 3.88
GCSH-206ENST00000569885 AEBP2Q6ZN18 517 aaPredicted RBP36.93■■■■□ 3.5
GCSH-206ENST00000569885 ABCC9O60706 1549 aa35.86■■■■□ 3.33
GCSH-206ENST00000569885 CHIC1Q5VXU3 224 aa35.31■■■■□ 3.24
GCSH-206ENST00000569885 CCDC180Q9P1Z9 1646 aa35.25■■■■□ 3.23
GCSH-206ENST00000569885 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
GCSH-206ENST00000569885 RB1CC1Q8TDY2 1594 aa33.83■■■■□ 3.01
GCSH-206ENST00000569885 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
GCSH-206ENST00000569885 NACADO15069 1562 aa33.49■■■□□ 2.95
GCSH-206ENST00000569885 PABPN1Q86U42 306 aaKnown RBP eCLIP33.43■■■□□ 2.94
GCSH-206ENST00000569885 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
GCSH-206ENST00000569885 BICRAQ9NZM4 1560 aa32.84■■■□□ 2.85
GCSH-206ENST00000569885 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
GCSH-206ENST00000569885 ZCCHC6Q5VYS8 1495 aaKnown RBP32.43■■■□□ 2.78
GCSH-206ENST00000569885 CECR2Q9BXF3 1484 aa32.3■■■□□ 2.76
GCSH-206ENST00000569885 DCAF1Q9Y4B6 1507 aa32.3■■■□□ 2.76
GCSH-206ENST00000569885 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
GCSH-206ENST00000569885 SCRIBQ14160 1630 aa32.28■■■□□ 2.76
GCSH-206ENST00000569885 CC2D2AQ9P2K1 1620 aa32.27■■■□□ 2.76
GCSH-206ENST00000569885 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
GCSH-206ENST00000569885 SENP3Q9H4L4 574 aaPredicted RBP31.44■■■□□ 2.62
GCSH-206ENST00000569885 DNAJC5Q9H3Z4 198 aa31.43■■■□□ 2.62
GCSH-206ENST00000569885 PHF23Q9BUL5 403 aaPredicted RBP31.1■■■□□ 2.57
GCSH-206ENST00000569885 ERCC6Q03468 1493 aa30.99■■■□□ 2.55
GCSH-206ENST00000569885 NCAPD3P42695 1498 aa30.95■■■□□ 2.55
GCSH-206ENST00000569885 CUX2O14529 1486 aa30.93■■■□□ 2.54
GCSH-206ENST00000569885 ATAD2BQ9ULI0 1458 aa30.85■■■□□ 2.53
GCSH-206ENST00000569885 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
GCSH-206ENST00000569885 NESP48681 1621 aa30.68■■■□□ 2.5
GCSH-206ENST00000569885 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
GCSH-206ENST00000569885 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
GCSH-206ENST00000569885 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
GCSH-206ENST00000569885 BAZ1AQ9NRL2 1556 aaPredicted RBP30.48■■■□□ 2.47
GCSH-206ENST00000569885 THOC2Q8NI27 1593 aaKnown RBP30.31■■■□□ 2.44
GCSH-206ENST00000569885 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
GCSH-206ENST00000569885 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
GCSH-206ENST00000569885 LAMC3Q9Y6N6 1575 aa30.28■■■□□ 2.44
GCSH-206ENST00000569885 PDS5BQ9NTI5 1447 aa30.21■■■□□ 2.43
GCSH-206ENST00000569885 KIF21AQ7Z4S6 1674 aa30.16■■■□□ 2.42
GCSH-206ENST00000569885 CADPSQ9ULU8 1353 aa30.06■■■□□ 2.4
GCSH-206ENST00000569885 TRIM41Q8WV44 630 aa30.06■■■□□ 2.4
GCSH-206ENST00000569885 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
GCSH-206ENST00000569885 WIZO95785 1651 aa29.88■■■□□ 2.37
GCSH-206ENST00000569885 WDR62O43379 1518 aa29.83■■■□□ 2.37
GCSH-206ENST00000569885 CEP164Q9UPV0 1460 aa29.77■■■□□ 2.36
GCSH-206ENST00000569885 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
GCSH-206ENST00000569885 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
GCSH-206ENST00000569885 CFTRP13569 1480 aa29.6■■■□□ 2.33
GCSH-206ENST00000569885 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
GCSH-206ENST00000569885 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
GCSH-206ENST00000569885 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.31
GCSH-206ENST00000569885 FOXD1Q16676 465 aa29.29■■■□□ 2.28
GCSH-206ENST00000569885 ZNF608Q9ULD9 1512 aaPredicted RBP29.22■■■□□ 2.27
GCSH-206ENST00000569885 CCDC88BA6NC98 1476 aa29.2■■■□□ 2.26
GCSH-206ENST00000569885 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
GCSH-206ENST00000569885 RIMBP3CA6NJZ7 1639 aa29.14■■■□□ 2.26
GCSH-206ENST00000569885 RIMBP3BA6NNM3 1639 aa29.14■■■□□ 2.26
GCSH-206ENST00000569885 RIMBP3Q9UFD9 1639 aa29.14■■■□□ 2.26
GCSH-206ENST00000569885 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
GCSH-206ENST00000569885 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
GCSH-206ENST00000569885 ARHGEF11O15085 1522 aa29.03■■■□□ 2.24
GCSH-206ENST00000569885 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
GCSH-206ENST00000569885 ABCC8Q09428 1581 aa28.96■■■□□ 2.23
GCSH-206ENST00000569885 FBLN2P98095 1184 aa28.96■■■□□ 2.23
GCSH-206ENST00000569885 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
GCSH-206ENST00000569885 AQRO60306 1485 aaKnown RBP eCLIP28.95■■■□□ 2.229e-9■■■■■ 35.9
GCSH-206ENST00000569885 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
GCSH-206ENST00000569885 TRHP20396 242 aaPredicted RBP28.84■■■□□ 2.21
GCSH-206ENST00000569885 TARBP1Q13395 1621 aaKnown RBP28.8■■■□□ 2.2
GCSH-206ENST00000569885 CHD1O14646 1710 aa28.79■■■□□ 2.2
GCSH-206ENST00000569885 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
GCSH-206ENST00000569885 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
GCSH-206ENST00000569885 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
GCSH-206ENST00000569885 ARAP1Q96P48 1450 aa28.73■■■□□ 2.19
GCSH-206ENST00000569885 SOGA1O94964 1423 aa28.7■■■□□ 2.19
GCSH-206ENST00000569885 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
GCSH-206ENST00000569885 SNAPC4Q5SXM2 1469 aa28.6■■■□□ 2.17
GCSH-206ENST00000569885 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
GCSH-206ENST00000569885 CUX1P39880 1505 aa28.47■■■□□ 2.15
GCSH-206ENST00000569885 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.15
GCSH-206ENST00000569885 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
GCSH-206ENST00000569885 MAGI1Q96QZ7 1491 aaPredicted RBP28.44■■■□□ 2.14
GCSH-206ENST00000569885 SYNJ1O43426 1573 aa28.43■■■□□ 2.14
GCSH-206ENST00000569885 WDR97A6NE52 1622 aa28.4■■■□□ 2.14
GCSH-206ENST00000569885 SYNJ2O15056 1496 aa28.38■■■□□ 2.13
GCSH-206ENST00000569885 PLPPR3Q6T4P5 718 aa28.32■■■□□ 2.12
GCSH-206ENST00000569885 GAPVD1Q14C86 1478 aa28.31■■■□□ 2.12
GCSH-206ENST00000569885 PBRM1Q86U86 1689 aa28.21■■■□□ 2.11
GCSH-206ENST00000569885 SUPT5HO00267 1087 aaKnown RBP28.18■■■□□ 2.1
GCSH-206ENST00000569885 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
GCSH-206ENST00000569885 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
GCSH-206ENST00000569885 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
GCSH-206ENST00000569885 ERCC6L2Q5T890 1561 aa28.07■■■□□ 2.08
GCSH-206ENST00000569885 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
GCSH-206ENST00000569885 CEP170Q5SW79 1584 aa27.97■■■□□ 2.07
GCSH-206ENST00000569885 ADAMTS12P58397 1594 aa27.96■■■□□ 2.07
GCSH-206ENST00000569885 NUP160Q12769 1436 aa27.96■■■□□ 2.07
GCSH-206ENST00000569885 FHAD1B1AJZ9 1412 aa27.93■■■□□ 2.06
GCSH-206ENST00000569885 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
GCSH-206ENST00000569885 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms