RNA–Protein interactions for RNA: ENST00000569813.5

ULK3-221, Transcript of unc-51 like kinase 3, humanhuman

TSL 2

Gene ULK3, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK3-221ENST00000569813 NISCHQ9Y2I1 1504 aa40.65■■■■■ 4.1
ULK3-221ENST00000569813 CCDC180Q9P1Z9 1646 aa36.12■■■■□ 3.37
ULK3-221ENST00000569813 ABCC9O60706 1549 aa35.29■■■■□ 3.24
ULK3-221ENST00000569813 RB1CC1Q8TDY2 1594 aa33.95■■■■□ 3.03
ULK3-221ENST00000569813 NACADO15069 1562 aa33.94■■■■□ 3.02
ULK3-221ENST00000569813 ZCCHC6Q5VYS8 1495 aaKnown RBP33.88■■■■□ 3.01
ULK3-221ENST00000569813 MYO15BQ96JP2 1530 aa33.82■■■■□ 3
ULK3-221ENST00000569813 DCAF8L2P0C7V8 631 aa33.75■■■□□ 2.99
ULK3-221ENST00000569813 DCAF1Q9Y4B6 1507 aa33.67■■■□□ 2.98
ULK3-221ENST00000569813 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
ULK3-221ENST00000569813 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
ULK3-221ENST00000569813 PABPN1Q86U42 306 aaKnown RBP eCLIP32.97■■■□□ 2.87
ULK3-221ENST00000569813 SCRIBQ14160 1630 aa32.91■■■□□ 2.86
ULK3-221ENST00000569813 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
ULK3-221ENST00000569813 DNAJC5BQ9UF47 199 aa32.48■■■□□ 2.79
ULK3-221ENST00000569813 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
ULK3-221ENST00000569813 CC2D2AQ9P2K1 1620 aa31.96■■■□□ 2.71
ULK3-221ENST00000569813 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
ULK3-221ENST00000569813 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
ULK3-221ENST00000569813 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
ULK3-221ENST00000569813 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
ULK3-221ENST00000569813 NCAPD3P42695 1498 aa31.36■■■□□ 2.61
ULK3-221ENST00000569813 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
ULK3-221ENST00000569813 SMARCA2P51531 1590 aa31.28■■■□□ 2.6
ULK3-221ENST00000569813 PEG3Q9GZU2 1588 aa31.27■■■□□ 2.6
ULK3-221ENST00000569813 HMGXB3Q12766 1538 aa31.19■■■□□ 2.58
ULK3-221ENST00000569813 BAZ1BQ9UIG0 1483 aaKnown RBP31.05■■■□□ 2.56
ULK3-221ENST00000569813 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
ULK3-221ENST00000569813 WIZO95785 1651 aa30.97■■■□□ 2.55
ULK3-221ENST00000569813 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
ULK3-221ENST00000569813 NESP48681 1621 aa30.59■■■□□ 2.49
ULK3-221ENST00000569813 LAMC3Q9Y6N6 1575 aa30.49■■■□□ 2.47
ULK3-221ENST00000569813 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
ULK3-221ENST00000569813 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
ULK3-221ENST00000569813 CCDC88BA6NC98 1476 aa30.3■■■□□ 2.44
ULK3-221ENST00000569813 CFTRP13569 1480 aa30.26■■■□□ 2.44
ULK3-221ENST00000569813 PDS5BQ9NTI5 1447 aa30.24■■■□□ 2.43
ULK3-221ENST00000569813 KIF21AQ7Z4S6 1674 aa30.2■■■□□ 2.43
ULK3-221ENST00000569813 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
ULK3-221ENST00000569813 CUX2O14529 1486 aa30.11■■■□□ 2.41
ULK3-221ENST00000569813 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
ULK3-221ENST00000569813 FANCD2Q9BXW9 1451 aa30.05■■■□□ 2.4
ULK3-221ENST00000569813 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
ULK3-221ENST00000569813 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
ULK3-221ENST00000569813 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
ULK3-221ENST00000569813 WDR62O43379 1518 aa29.91■■■□□ 2.38
ULK3-221ENST00000569813 URB2Q14146 1524 aaKnown RBP29.8■■■□□ 2.36
ULK3-221ENST00000569813 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
ULK3-221ENST00000569813 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
ULK3-221ENST00000569813 ABCC8Q09428 1581 aa29.53■■■□□ 2.32
ULK3-221ENST00000569813 CUX1P39880 1505 aa29.4■■■□□ 2.3
ULK3-221ENST00000569813 IFT140Q96RY7 1462 aa29.37■■■□□ 2.29
ULK3-221ENST00000569813 POLA1P09884 1462 aaPredicted RBP29.35■■■□□ 2.29
ULK3-221ENST00000569813 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
ULK3-221ENST00000569813 ZNF608Q9ULD9 1512 aaPredicted RBP29.29■■■□□ 2.28
ULK3-221ENST00000569813 FGD5Q6ZNL6 1462 aa29.25■■■□□ 2.27
ULK3-221ENST00000569813 RAD54L2Q9Y4B4 1467 aa29.21■■■□□ 2.27
ULK3-221ENST00000569813 SOGA1O94964 1423 aa29.19■■■□□ 2.26
ULK3-221ENST00000569813 DNAJC5Q9H3Z4 198 aa29.18■■■□□ 2.26
ULK3-221ENST00000569813 WRNQ14191 1432 aaPredicted RBP eCLIP29.15■■■□□ 2.26
ULK3-221ENST00000569813 EIF4G3O43432 1585 aaKnown RBP29.14■■■□□ 2.26
ULK3-221ENST00000569813 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
ULK3-221ENST00000569813 BIVM-ERCC5R4GMW8 1640 aa29.13■■■□□ 2.25
ULK3-221ENST00000569813 TOP2BQ02880 1626 aa29.12■■■□□ 2.25
ULK3-221ENST00000569813 AQRO60306 1485 aaKnown RBP eCLIP29.09■■■□□ 2.25
ULK3-221ENST00000569813 WDR97A6NE52 1622 aa29.06■■■□□ 2.24
ULK3-221ENST00000569813 TDRD9Q8NDG6 1382 aaKnown RBP29.02■■■□□ 2.24
ULK3-221ENST00000569813 ABCA10Q8WWZ4 1543 aa29■■■□□ 2.23
ULK3-221ENST00000569813 ABCA5Q8WWZ7 1642 aa28.9■■■□□ 2.22
ULK3-221ENST00000569813 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
ULK3-221ENST00000569813 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
ULK3-221ENST00000569813 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
ULK3-221ENST00000569813 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
ULK3-221ENST00000569813 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
ULK3-221ENST00000569813 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
ULK3-221ENST00000569813 CHD1O14646 1710 aa28.76■■■□□ 2.19
ULK3-221ENST00000569813 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
ULK3-221ENST00000569813 ERICH3Q5RHP9 1530 aa28.64■■■□□ 2.17
ULK3-221ENST00000569813 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
ULK3-221ENST00000569813 FBLN2P98095 1184 aa28.6■■■□□ 2.17
ULK3-221ENST00000569813 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
ULK3-221ENST00000569813 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
ULK3-221ENST00000569813 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
ULK3-221ENST00000569813 CLASP1Q7Z460 1538 aa28.51■■■□□ 2.15
ULK3-221ENST00000569813 GRIN2AQ12879 1464 aa28.49■■■□□ 2.15
ULK3-221ENST00000569813 IGF1RP08069 1367 aa28.48■■■□□ 2.15
ULK3-221ENST00000569813 NUP160Q12769 1436 aa28.41■■■□□ 2.14
ULK3-221ENST00000569813 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
ULK3-221ENST00000569813 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
ULK3-221ENST00000569813 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
ULK3-221ENST00000569813 ARHGEF11O15085 1522 aa28.4■■■□□ 2.14
ULK3-221ENST00000569813 CEP170Q5SW79 1584 aa28.38■■■□□ 2.13
ULK3-221ENST00000569813 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
ULK3-221ENST00000569813 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
ULK3-221ENST00000569813 CUL7Q14999 1698 aa28.35■■■□□ 2.13
ULK3-221ENST00000569813 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
ULK3-221ENST00000569813 SHROOM2Q13796 1616 aa28.21■■■□□ 2.11
ULK3-221ENST00000569813 ARAP1Q96P48 1450 aa28.21■■■□□ 2.11
ULK3-221ENST00000569813 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
ULK3-221ENST00000569813 ERCC6L2Q5T890 1561 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms