RNA–Protein interactions for RNA: ENST00000569388.5

NAE1-221, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-221ENST00000569388 NISCHQ9Y2I1 1504 aa51.54■■■■■ 5.84
NAE1-221ENST00000569388 CCDC180Q9P1Z9 1646 aa45.85■■■■■ 4.93
NAE1-221ENST00000569388 ABCC9O60706 1549 aa44.83■■■■■ 4.77
NAE1-221ENST00000569388 RB1CC1Q8TDY2 1594 aa43.09■■■■■ 4.49
NAE1-221ENST00000569388 DCAF8L2P0C7V8 631 aa43.04■■■■■ 4.48
NAE1-221ENST00000569388 NACADO15069 1562 aa43.02■■■■■ 4.48
NAE1-221ENST00000569388 ZCCHC6Q5VYS8 1495 aaKnown RBP42.96■■■■■ 4.47
NAE1-221ENST00000569388 MYO15BQ96JP2 1530 aa42.71■■■■■ 4.43
NAE1-221ENST00000569388 DCAF1Q9Y4B6 1507 aa42.58■■■■■ 4.41
NAE1-221ENST00000569388 UNC13AQ9UPW8 1703 aa42.29■■■■■ 4.36
NAE1-221ENST00000569388 SCRIBQ14160 1630 aa41.92■■■■■ 4.3
NAE1-221ENST00000569388 PABPN1Q86U42 306 aaKnown RBP eCLIP41.86■■■■■ 4.29
NAE1-221ENST00000569388 BICRAQ9NZM4 1560 aa41.84■■■■■ 4.29
NAE1-221ENST00000569388 SHROOM4Q9ULL8 1493 aa41.26■■■■■ 4.2
NAE1-221ENST00000569388 DNAJC5BQ9UF47 199 aa41.04■■■■■ 4.16
NAE1-221ENST00000569388 EIF4G1Q04637 1599 aaKnown RBP40.72■■■■■ 4.11
NAE1-221ENST00000569388 CC2D2AQ9P2K1 1620 aa40.56■■■■■ 4.08
NAE1-221ENST00000569388 CECR2Q9BXF3 1484 aa40.22■■■■■ 4.03
NAE1-221ENST00000569388 SMARCA4P51532 1647 aa40.05■■■■■ 4
NAE1-221ENST00000569388 BAZ1AQ9NRL2 1556 aaPredicted RBP39.94■■■■□ 3.98
NAE1-221ENST00000569388 MROH2BQ7Z745 1585 aa39.77■■■■□ 3.96
NAE1-221ENST00000569388 ATAD2BQ9ULI0 1458 aa39.74■■■■□ 3.95
NAE1-221ENST00000569388 SMARCA2P51531 1590 aa39.69■■■■□ 3.94
NAE1-221ENST00000569388 NCAPD3P42695 1498 aa39.65■■■■□ 3.94
NAE1-221ENST00000569388 PEG3Q9GZU2 1588 aa39.58■■■■□ 3.93
NAE1-221ENST00000569388 HMGXB3Q12766 1538 aa39.54■■■■□ 3.92
NAE1-221ENST00000569388 BAZ1BQ9UIG0 1483 aaKnown RBP39.44■■■■□ 3.9
NAE1-221ENST00000569388 WIZO95785 1651 aa39.41■■■■□ 3.9
NAE1-221ENST00000569388 RSF1Q96T23 1441 aaPredicted RBP39.27■■■■□ 3.88
NAE1-221ENST00000569388 TOP2AP11388 1531 aaKnown RBP38.92■■■■□ 3.82
NAE1-221ENST00000569388 NESP48681 1621 aa38.83■■■■□ 3.81
NAE1-221ENST00000569388 LAMC3Q9Y6N6 1575 aa38.67■■■■□ 3.78
NAE1-221ENST00000569388 ERCC6Q03468 1493 aa38.6■■■■□ 3.77
NAE1-221ENST00000569388 CADPSQ9ULU8 1353 aa38.51■■■■□ 3.76
NAE1-221ENST00000569388 KIF21AQ7Z4S6 1674 aa38.44■■■■□ 3.74
NAE1-221ENST00000569388 CCDC88BA6NC98 1476 aa38.43■■■■□ 3.74
NAE1-221ENST00000569388 SUPT5HO00267 1087 aaKnown RBP38.34■■■■□ 3.73
NAE1-221ENST00000569388 PDS5BQ9NTI5 1447 aa38.34■■■■□ 3.73
NAE1-221ENST00000569388 CFTRP13569 1480 aa38.31■■■■□ 3.72
NAE1-221ENST00000569388 THOC2Q8NI27 1593 aaKnown RBP38.25■■■■□ 3.71
NAE1-221ENST00000569388 PRDM2Q13029 1718 aa38.2■■■■□ 3.71
NAE1-221ENST00000569388 FANCD2Q9BXW9 1451 aa38.14■■■■□ 3.7
NAE1-221ENST00000569388 CUX2O14529 1486 aa38.12■■■■□ 3.69
NAE1-221ENST00000569388 CEP164Q9UPV0 1460 aa38.09■■■■□ 3.69
NAE1-221ENST00000569388 MRC2Q9UBG0 1479 aa38.02■■■■□ 3.68
NAE1-221ENST00000569388 WDR62O43379 1518 aa37.91■■■■□ 3.66
NAE1-221ENST00000569388 URB2Q14146 1524 aaKnown RBP37.78■■■■□ 3.64
NAE1-221ENST00000569388 TOPBP1Q92547 1522 aa37.55■■■■□ 3.6
NAE1-221ENST00000569388 DNMBPQ6XZF7 1577 aa37.52■■■■□ 3.6
NAE1-221ENST00000569388 ABCC8Q09428 1581 aa37.44■■■■□ 3.58
NAE1-221ENST00000569388 CUX1P39880 1505 aa37.31■■■■□ 3.56
NAE1-221ENST00000569388 IFT140Q96RY7 1462 aa37.25■■■■□ 3.55
NAE1-221ENST00000569388 POLA1P09884 1462 aaPredicted RBP37.23■■■■□ 3.55
NAE1-221ENST00000569388 FGD5Q6ZNL6 1462 aa37.17■■■■□ 3.54
NAE1-221ENST00000569388 TARBP1Q13395 1621 aaKnown RBP37.17■■■■□ 3.54
NAE1-221ENST00000569388 ZNF608Q9ULD9 1512 aaPredicted RBP37.15■■■■□ 3.54
NAE1-221ENST00000569388 RAD54L2Q9Y4B4 1467 aa37.09■■■■□ 3.53
NAE1-221ENST00000569388 EIF4G3O43432 1585 aaKnown RBP37.06■■■■□ 3.52
NAE1-221ENST00000569388 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
NAE1-221ENST00000569388 WRNQ14191 1432 aaPredicted RBP eCLIP37.03■■■■□ 3.52
NAE1-221ENST00000569388 SOGA1O94964 1423 aa37.02■■■■□ 3.52
NAE1-221ENST00000569388 BIVM-ERCC5R4GMW8 1640 aa37.02■■■■□ 3.52
NAE1-221ENST00000569388 TOP2BQ02880 1626 aa36.99■■■■□ 3.51
NAE1-221ENST00000569388 WDR97A6NE52 1622 aa36.93■■■■□ 3.5
NAE1-221ENST00000569388 AQRO60306 1485 aaKnown RBP eCLIP36.92■■■■□ 3.54e-7■■■■□ 21.6
NAE1-221ENST00000569388 TDRD9Q8NDG6 1382 aaKnown RBP36.84■■■■□ 3.49
NAE1-221ENST00000569388 DNAJC5Q9H3Z4 198 aa36.83■■■■□ 3.49
NAE1-221ENST00000569388 ABCA10Q8WWZ4 1543 aa36.75■■■■□ 3.47
NAE1-221ENST00000569388 PBRM1Q86U86 1689 aa36.69■■■■□ 3.46
NAE1-221ENST00000569388 ABCA5Q8WWZ7 1642 aa36.69■■■■□ 3.46
NAE1-221ENST00000569388 CHD1O14646 1710 aa36.63■■■■□ 3.45
NAE1-221ENST00000569388 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
NAE1-221ENST00000569388 SNAPC4Q5SXM2 1469 aa36.61■■■■□ 3.45
NAE1-221ENST00000569388 GRIN2BQ13224 1484 aa36.6■■■■□ 3.45
NAE1-221ENST00000569388 MAGI1Q96QZ7 1491 aaPredicted RBP36.5■■■■□ 3.43
NAE1-221ENST00000569388 OSCARQ8IYS5 282 aa36.49■■■■□ 3.43
NAE1-221ENST00000569388 FBLN2P98095 1184 aa36.45■■■■□ 3.43
NAE1-221ENST00000569388 SYNJ2O15056 1496 aa36.37■■■■□ 3.41
NAE1-221ENST00000569388 ADAMTS12P58397 1594 aa36.35■■■■□ 3.41
NAE1-221ENST00000569388 ERICH3Q5RHP9 1530 aa36.32■■■■□ 3.4
NAE1-221ENST00000569388 CHMP7Q8WUX9 453 aaPredicted RBP36.3■■■■□ 3.4
NAE1-221ENST00000569388 KIF27Q86VH2 1401 aa36.23■■■■□ 3.39
NAE1-221ENST00000569388 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
NAE1-221ENST00000569388 GRIN2AQ12879 1464 aa36.16■■■■□ 3.38
NAE1-221ENST00000569388 TRIM41Q8WV44 630 aa36.15■■■■□ 3.38
NAE1-221ENST00000569388 CLASP1Q7Z460 1538 aa36.13■■■■□ 3.38
NAE1-221ENST00000569388 RIMBP3CA6NJZ7 1639 aa36.08■■■■□ 3.37
NAE1-221ENST00000569388 RIMBP3BA6NNM3 1639 aa36.08■■■■□ 3.37
NAE1-221ENST00000569388 RIMBP3Q9UFD9 1639 aa36.08■■■■□ 3.37
NAE1-221ENST00000569388 CUL7Q14999 1698 aa36.06■■■■□ 3.36
NAE1-221ENST00000569388 IGF1RP08069 1367 aa36.05■■■■□ 3.36
NAE1-221ENST00000569388 CEP170Q5SW79 1584 aa36.04■■■■□ 3.36
NAE1-221ENST00000569388 ARHGEF11O15085 1522 aa36.03■■■■□ 3.36
NAE1-221ENST00000569388 RUSC2Q8N2Y8 1516 aa36.02■■■■□ 3.36
NAE1-221ENST00000569388 NUP160Q12769 1436 aa35.97■■■■□ 3.35
NAE1-221ENST00000569388 CARMIL1Q5VZK9 1371 aa35.86■■■■□ 3.33
NAE1-221ENST00000569388 CHIC1Q5VXU3 224 aa35.76■■■■□ 3.32
NAE1-221ENST00000569388 ARAP1Q96P48 1450 aa35.75■■■■□ 3.31
NAE1-221ENST00000569388 SHROOM2Q13796 1616 aa35.75■■■■□ 3.31
NAE1-221ENST00000569388 ERCC6L2Q5T890 1561 aa35.71■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms