RNA–Protein interactions for RNA: ENST00000569316.1

CMTM2-204, Transcript of CKLF like MARVEL transmembrane domain containing 2, humanhuman

TSL 5

Gene CMTM2, Length 454 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM2-204ENST00000569316 NISCHQ9Y2I1 1504 aa24.03■■□□□ 1.44
CMTM2-204ENST00000569316 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
CMTM2-204ENST00000569316 ABCC9O60706 1549 aa20.83■□□□□ 0.92
CMTM2-204ENST00000569316 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
CMTM2-204ENST00000569316 NACADO15069 1562 aa20.08■□□□□ 0.81
CMTM2-204ENST00000569316 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
CMTM2-204ENST00000569316 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
CMTM2-204ENST00000569316 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
CMTM2-204ENST00000569316 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
CMTM2-204ENST00000569316 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
CMTM2-204ENST00000569316 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
CMTM2-204ENST00000569316 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
CMTM2-204ENST00000569316 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
CMTM2-204ENST00000569316 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
CMTM2-204ENST00000569316 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
CMTM2-204ENST00000569316 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
CMTM2-204ENST00000569316 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.62
CMTM2-204ENST00000569316 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
CMTM2-204ENST00000569316 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
CMTM2-204ENST00000569316 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
CMTM2-204ENST00000569316 NCAPD3P42695 1498 aa18.52■□□□□ 0.56
CMTM2-204ENST00000569316 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
CMTM2-204ENST00000569316 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
CMTM2-204ENST00000569316 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
CMTM2-204ENST00000569316 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
CMTM2-204ENST00000569316 HMGXB3Q12766 1538 aa18.46■□□□□ 0.55
CMTM2-204ENST00000569316 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
CMTM2-204ENST00000569316 WIZO95785 1651 aa18.33■□□□□ 0.52
CMTM2-204ENST00000569316 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
CMTM2-204ENST00000569316 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
CMTM2-204ENST00000569316 NESP48681 1621 aa18.05■□□□□ 0.48
CMTM2-204ENST00000569316 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
CMTM2-204ENST00000569316 CADPSQ9ULU8 1353 aa17.95■□□□□ 0.46
CMTM2-204ENST00000569316 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
CMTM2-204ENST00000569316 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
CMTM2-204ENST00000569316 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
CMTM2-204ENST00000569316 CFTRP13569 1480 aa17.88■□□□□ 0.45
CMTM2-204ENST00000569316 PDS5BQ9NTI5 1447 aa17.87■□□□□ 0.45
CMTM2-204ENST00000569316 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
CMTM2-204ENST00000569316 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
CMTM2-204ENST00000569316 CUX2O14529 1486 aa17.8■□□□□ 0.44
CMTM2-204ENST00000569316 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
CMTM2-204ENST00000569316 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
CMTM2-204ENST00000569316 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
CMTM2-204ENST00000569316 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
CMTM2-204ENST00000569316 WDR62O43379 1518 aa17.67■□□□□ 0.42
CMTM2-204ENST00000569316 URB2Q14146 1524 aaKnown RBP17.59■□□□□ 0.41
CMTM2-204ENST00000569316 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
CMTM2-204ENST00000569316 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
CMTM2-204ENST00000569316 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
CMTM2-204ENST00000569316 CUX1P39880 1505 aa17.37■□□□□ 0.37
CMTM2-204ENST00000569316 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
CMTM2-204ENST00000569316 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
CMTM2-204ENST00000569316 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
CMTM2-204ENST00000569316 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
CMTM2-204ENST00000569316 ZNF608Q9ULD9 1512 aaPredicted RBP17.28■□□□□ 0.36
CMTM2-204ENST00000569316 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
CMTM2-204ENST00000569316 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
CMTM2-204ENST00000569316 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
CMTM2-204ENST00000569316 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
CMTM2-204ENST00000569316 SOGA1O94964 1423 aa17.23■□□□□ 0.35
CMTM2-204ENST00000569316 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
CMTM2-204ENST00000569316 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
CMTM2-204ENST00000569316 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
CMTM2-204ENST00000569316 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
CMTM2-204ENST00000569316 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.34
CMTM2-204ENST00000569316 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
CMTM2-204ENST00000569316 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
CMTM2-204ENST00000569316 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
CMTM2-204ENST00000569316 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
CMTM2-204ENST00000569316 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
CMTM2-204ENST00000569316 CHD1O14646 1710 aa17.05■□□□□ 0.32
CMTM2-204ENST00000569316 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
CMTM2-204ENST00000569316 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
CMTM2-204ENST00000569316 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.32
CMTM2-204ENST00000569316 OSCARQ8IYS5 282 aa17■□□□□ 0.31
CMTM2-204ENST00000569316 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
CMTM2-204ENST00000569316 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
CMTM2-204ENST00000569316 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
CMTM2-204ENST00000569316 FBLN2P98095 1184 aa16.88■□□□□ 0.29
CMTM2-204ENST00000569316 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
CMTM2-204ENST00000569316 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
CMTM2-204ENST00000569316 KIF27Q86VH2 1401 aa16.86■□□□□ 0.29
CMTM2-204ENST00000569316 CLASP1Q7Z460 1538 aa16.85■□□□□ 0.29
CMTM2-204ENST00000569316 GRIN2AQ12879 1464 aa16.83■□□□□ 0.28
CMTM2-204ENST00000569316 CUL7Q14999 1698 aa16.81■□□□□ 0.28
CMTM2-204ENST00000569316 IGF1RP08069 1367 aa16.8■□□□□ 0.28
CMTM2-204ENST00000569316 RIMBP3CA6NJZ7 1639 aa16.8■□□□□ 0.28
CMTM2-204ENST00000569316 RIMBP3BA6NNM3 1639 aa16.8■□□□□ 0.28
CMTM2-204ENST00000569316 RIMBP3Q9UFD9 1639 aa16.8■□□□□ 0.28
CMTM2-204ENST00000569316 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
CMTM2-204ENST00000569316 NUP160Q12769 1436 aa16.78■□□□□ 0.28
CMTM2-204ENST00000569316 CEP170Q5SW79 1584 aa16.77■□□□□ 0.28
CMTM2-204ENST00000569316 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
CMTM2-204ENST00000569316 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
CMTM2-204ENST00000569316 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
CMTM2-204ENST00000569316 SHROOM2Q13796 1616 aa16.69■□□□□ 0.26
CMTM2-204ENST00000569316 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
CMTM2-204ENST00000569316 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
CMTM2-204ENST00000569316 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms