RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
CHRFAM7A-206ENST00000569278 AEBP2Q6ZN18 517 aaPredicted RBP28.25■■■□□ 2.11
CHRFAM7A-206ENST00000569278 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
CHRFAM7A-206ENST00000569278 ABCC9O60706 1549 aa25.87■■□□□ 1.73
CHRFAM7A-206ENST00000569278 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
CHRFAM7A-206ENST00000569278 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
CHRFAM7A-206ENST00000569278 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
CHRFAM7A-206ENST00000569278 NACADO15069 1562 aa24.34■■□□□ 1.49
CHRFAM7A-206ENST00000569278 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
CHRFAM7A-206ENST00000569278 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
CHRFAM7A-206ENST00000569278 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
CHRFAM7A-206ENST00000569278 PABPN1Q86U42 306 aaKnown RBP eCLIP23.99■■□□□ 1.43
CHRFAM7A-206ENST00000569278 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
CHRFAM7A-206ENST00000569278 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
CHRFAM7A-206ENST00000569278 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
CHRFAM7A-206ENST00000569278 ZCCHC6Q5VYS8 1495 aaKnown RBP23.75■■□□□ 1.39
CHRFAM7A-206ENST00000569278 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.38
CHRFAM7A-206ENST00000569278 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
CHRFAM7A-206ENST00000569278 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
CHRFAM7A-206ENST00000569278 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
CHRFAM7A-206ENST00000569278 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.33
CHRFAM7A-206ENST00000569278 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
CHRFAM7A-206ENST00000569278 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
CHRFAM7A-206ENST00000569278 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
CHRFAM7A-206ENST00000569278 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
CHRFAM7A-206ENST00000569278 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
CHRFAM7A-206ENST00000569278 HMGXB3Q12766 1538 aa22.35■■□□□ 1.17
CHRFAM7A-206ENST00000569278 CUX2O14529 1486 aa22.34■■□□□ 1.17
CHRFAM7A-206ENST00000569278 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
CHRFAM7A-206ENST00000569278 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
CHRFAM7A-206ENST00000569278 FOXD1Q16676 465 aa22.25■■□□□ 1.15
CHRFAM7A-206ENST00000569278 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
CHRFAM7A-206ENST00000569278 NESP48681 1621 aa22.24■■□□□ 1.15
CHRFAM7A-206ENST00000569278 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
CHRFAM7A-206ENST00000569278 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
CHRFAM7A-206ENST00000569278 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
CHRFAM7A-206ENST00000569278 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
CHRFAM7A-206ENST00000569278 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
CHRFAM7A-206ENST00000569278 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
CHRFAM7A-206ENST00000569278 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
CHRFAM7A-206ENST00000569278 WIZO95785 1651 aa21.82■■□□□ 1.08
CHRFAM7A-206ENST00000569278 PDS5BQ9NTI5 1447 aa21.78■■□□□ 1.08
CHRFAM7A-206ENST00000569278 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
CHRFAM7A-206ENST00000569278 WDR62O43379 1518 aa21.72■■□□□ 1.07
CHRFAM7A-206ENST00000569278 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
CHRFAM7A-206ENST00000569278 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
CHRFAM7A-206ENST00000569278 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
CHRFAM7A-206ENST00000569278 CFTRP13569 1480 aa21.53■■□□□ 1.04
CHRFAM7A-206ENST00000569278 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
CHRFAM7A-206ENST00000569278 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
CHRFAM7A-206ENST00000569278 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
CHRFAM7A-206ENST00000569278 PPP6R1Q9UPN7 881 aa21.41■■□□□ 1.02
CHRFAM7A-206ENST00000569278 ADRA2BP18089 450 aa21.38■■□□□ 1.01
CHRFAM7A-206ENST00000569278 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
CHRFAM7A-206ENST00000569278 TRIM41Q8WV44 630 aa21.32■■□□□ 1
CHRFAM7A-206ENST00000569278 CCDC88BA6NC98 1476 aa21.24■□□□□ 0.99
CHRFAM7A-206ENST00000569278 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
CHRFAM7A-206ENST00000569278 TOPBP1Q92547 1522 aa21.14■□□□□ 0.98
CHRFAM7A-206ENST00000569278 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
CHRFAM7A-206ENST00000569278 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
CHRFAM7A-206ENST00000569278 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
CHRFAM7A-206ENST00000569278 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
CHRFAM7A-206ENST00000569278 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
CHRFAM7A-206ENST00000569278 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
CHRFAM7A-206ENST00000569278 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
CHRFAM7A-206ENST00000569278 TARBP1Q13395 1621 aaKnown RBP21.03■□□□□ 0.96
CHRFAM7A-206ENST00000569278 ARHGEF11O15085 1522 aa21■□□□□ 0.95
CHRFAM7A-206ENST00000569278 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
CHRFAM7A-206ENST00000569278 CHD1O14646 1710 aa20.95■□□□□ 0.94
CHRFAM7A-206ENST00000569278 PIAS4Q8N2W9 510 aaPredicted RBP20.95■□□□□ 0.94
CHRFAM7A-206ENST00000569278 POLA1P09884 1462 aaPredicted RBP20.93■□□□□ 0.94
CHRFAM7A-206ENST00000569278 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHRFAM7A-206ENST00000569278 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
CHRFAM7A-206ENST00000569278 ARAP1Q96P48 1450 aa20.82■□□□□ 0.92
CHRFAM7A-206ENST00000569278 CUX1P39880 1505 aa20.77■□□□□ 0.92
CHRFAM7A-206ENST00000569278 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
CHRFAM7A-206ENST00000569278 CLASP1Q7Z460 1538 aa20.74■□□□□ 0.91
CHRFAM7A-206ENST00000569278 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
CHRFAM7A-206ENST00000569278 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
CHRFAM7A-206ENST00000569278 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
CHRFAM7A-206ENST00000569278 SOGA1O94964 1423 aa20.71■□□□□ 0.91
CHRFAM7A-206ENST00000569278 CYB5RLQ6IPT4 315 aa20.68■□□□□ 0.9
CHRFAM7A-206ENST00000569278 MAGI1Q96QZ7 1491 aaPredicted RBP20.63■□□□□ 0.89
CHRFAM7A-206ENST00000569278 FBLN2P98095 1184 aa20.62■□□□□ 0.89
CHRFAM7A-206ENST00000569278 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
CHRFAM7A-206ENST00000569278 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
CHRFAM7A-206ENST00000569278 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
CHRFAM7A-206ENST00000569278 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
CHRFAM7A-206ENST00000569278 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
CHRFAM7A-206ENST00000569278 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.87
CHRFAM7A-206ENST00000569278 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
CHRFAM7A-206ENST00000569278 MSH5O43196 834 aa20.48■□□□□ 0.87
CHRFAM7A-206ENST00000569278 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
CHRFAM7A-206ENST00000569278 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
CHRFAM7A-206ENST00000569278 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
CHRFAM7A-206ENST00000569278 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
CHRFAM7A-206ENST00000569278 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.86
CHRFAM7A-206ENST00000569278 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
CHRFAM7A-206ENST00000569278 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
CHRFAM7A-206ENST00000569278 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms