RNA–Protein interactions for RNA: ENST00000568718.5

ULK3-219, Transcript of unc-51 like kinase 3, humanhuman

TSL 2

Gene ULK3, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK3-219ENST00000568718 NISCHQ9Y2I1 1504 aa32.69■■■□□ 2.82
ULK3-219ENST00000568718 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
ULK3-219ENST00000568718 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
ULK3-219ENST00000568718 ABCC9O60706 1549 aa27.29■■□□□ 1.96
ULK3-219ENST00000568718 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
ULK3-219ENST00000568718 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
ULK3-219ENST00000568718 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
ULK3-219ENST00000568718 NACADO15069 1562 aa26.83■■□□□ 1.89
ULK3-219ENST00000568718 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
ULK3-219ENST00000568718 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
ULK3-219ENST00000568718 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
ULK3-219ENST00000568718 UNC13AQ9UPW8 1703 aa26.27■■□□□ 1.8
ULK3-219ENST00000568718 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
ULK3-219ENST00000568718 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
ULK3-219ENST00000568718 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
ULK3-219ENST00000568718 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
ULK3-219ENST00000568718 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
ULK3-219ENST00000568718 MROH2BQ7Z745 1585 aa25.2■■□□□ 1.62
ULK3-219ENST00000568718 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
ULK3-219ENST00000568718 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
ULK3-219ENST00000568718 WIZO95785 1651 aa25.07■■□□□ 1.6
ULK3-219ENST00000568718 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
ULK3-219ENST00000568718 PEG3Q9GZU2 1588 aa24.95■■□□□ 1.58
ULK3-219ENST00000568718 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
ULK3-219ENST00000568718 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
ULK3-219ENST00000568718 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
ULK3-219ENST00000568718 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
ULK3-219ENST00000568718 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
ULK3-219ENST00000568718 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
ULK3-219ENST00000568718 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
ULK3-219ENST00000568718 CCDC88BA6NC98 1476 aa24.46■■□□□ 1.51
ULK3-219ENST00000568718 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
ULK3-219ENST00000568718 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
ULK3-219ENST00000568718 CFTRP13569 1480 aa24.04■■□□□ 1.44
ULK3-219ENST00000568718 CADPSQ9ULU8 1353 aa24.01■■□□□ 1.43
ULK3-219ENST00000568718 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
ULK3-219ENST00000568718 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
ULK3-219ENST00000568718 NESP48681 1621 aa23.86■■□□□ 1.41
ULK3-219ENST00000568718 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
ULK3-219ENST00000568718 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
ULK3-219ENST00000568718 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
ULK3-219ENST00000568718 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
ULK3-219ENST00000568718 PDS5BQ9NTI5 1447 aa23.73■■□□□ 1.39
ULK3-219ENST00000568718 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
ULK3-219ENST00000568718 BIVM-ERCC5R4GMW8 1640 aa23.69■■□□□ 1.38
ULK3-219ENST00000568718 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
ULK3-219ENST00000568718 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
ULK3-219ENST00000568718 CEP164Q9UPV0 1460 aa23.64■■□□□ 1.38
ULK3-219ENST00000568718 CUX1P39880 1505 aa23.59■■□□□ 1.37
ULK3-219ENST00000568718 DNMBPQ6XZF7 1577 aa23.54■■□□□ 1.36
ULK3-219ENST00000568718 TOPBP1Q92547 1522 aa23.47■■□□□ 1.35
ULK3-219ENST00000568718 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
ULK3-219ENST00000568718 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
ULK3-219ENST00000568718 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
ULK3-219ENST00000568718 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
ULK3-219ENST00000568718 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
ULK3-219ENST00000568718 WDR62O43379 1518 aa23.34■■□□□ 1.33
ULK3-219ENST00000568718 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
ULK3-219ENST00000568718 SOGA1O94964 1423 aa23.28■■□□□ 1.32
ULK3-219ENST00000568718 EEA1Q15075 1411 aa23.28■■□□□ 1.32
ULK3-219ENST00000568718 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
ULK3-219ENST00000568718 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
ULK3-219ENST00000568718 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
ULK3-219ENST00000568718 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
ULK3-219ENST00000568718 RAD54L2Q9Y4B4 1467 aa23.2■■□□□ 1.3
ULK3-219ENST00000568718 ABCA10Q8WWZ4 1543 aa23.19■■□□□ 1.3
ULK3-219ENST00000568718 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
ULK3-219ENST00000568718 CUX2O14529 1486 aa23.15■■□□□ 1.3
ULK3-219ENST00000568718 CSRNP3Q8WYN3 585 aa23.13■■□□□ 1.29
ULK3-219ENST00000568718 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
ULK3-219ENST00000568718 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.28
ULK3-219ENST00000568718 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
ULK3-219ENST00000568718 KIF21BO75037 1637 aa23.03■■□□□ 1.28
ULK3-219ENST00000568718 LOC105371045A0A1W2PR82 267 aa23.01■■□□□ 1.27
ULK3-219ENST00000568718 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
ULK3-219ENST00000568718 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
ULK3-219ENST00000568718 IGF1RP08069 1367 aa22.97■■□□□ 1.27
ULK3-219ENST00000568718 CUL7Q14999 1698 aa22.97■■□□□ 1.27
ULK3-219ENST00000568718 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
ULK3-219ENST00000568718 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
ULK3-219ENST00000568718 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
ULK3-219ENST00000568718 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
ULK3-219ENST00000568718 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.262e-6■■■□□ 15.2
ULK3-219ENST00000568718 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
ULK3-219ENST00000568718 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
ULK3-219ENST00000568718 EHMT2Q96KQ7 1210 aa22.86■■□□□ 1.25
ULK3-219ENST00000568718 CARMIL1Q5VZK9 1371 aa22.86■■□□□ 1.25
ULK3-219ENST00000568718 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
ULK3-219ENST00000568718 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
ULK3-219ENST00000568718 TNIKQ9UKE5 1360 aa22.77■■□□□ 1.24
ULK3-219ENST00000568718 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
ULK3-219ENST00000568718 CTTNBP2Q8WZ74 1663 aa22.74■■□□□ 1.23
ULK3-219ENST00000568718 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
ULK3-219ENST00000568718 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
ULK3-219ENST00000568718 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
ULK3-219ENST00000568718 SYNJ2O15056 1496 aa22.62■■□□□ 1.21
ULK3-219ENST00000568718 CHD1O14646 1710 aa22.6■■□□□ 1.21
ULK3-219ENST00000568718 CEP162Q5TB80 1403 aa22.58■■□□□ 1.21
ULK3-219ENST00000568718 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
ULK3-219ENST00000568718 CHMP7Q8WUX9 453 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms