RNA–Protein interactions for RNA: ENST00000568649.5

PPCDC-210, Transcript of phosphopantothenoylcysteine decarboxylase, humanhuman

TSL 5 BASIC

Gene PPCDC, Length 926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCDC-210ENST00000568649 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
PPCDC-210ENST00000568649 CCDC180Q9P1Z9 1646 aa23.55■■□□□ 1.36
PPCDC-210ENST00000568649 ABCC9O60706 1549 aa22.41■■□□□ 1.18
PPCDC-210ENST00000568649 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
PPCDC-210ENST00000568649 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
PPCDC-210ENST00000568649 MYO15BQ96JP2 1530 aa22.08■■□□□ 1.13
PPCDC-210ENST00000568649 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
PPCDC-210ENST00000568649 NACADO15069 1562 aa21.99■■□□□ 1.11
PPCDC-210ENST00000568649 RB1CC1Q8TDY2 1594 aa21.86■■□□□ 1.09
PPCDC-210ENST00000568649 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
PPCDC-210ENST00000568649 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
PPCDC-210ENST00000568649 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
PPCDC-210ENST00000568649 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
PPCDC-210ENST00000568649 PABPN1Q86U42 306 aaKnown RBP eCLIP21.05■□□□□ 0.96
PPCDC-210ENST00000568649 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
PPCDC-210ENST00000568649 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
PPCDC-210ENST00000568649 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
PPCDC-210ENST00000568649 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
PPCDC-210ENST00000568649 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
PPCDC-210ENST00000568649 EIF4G1Q04637 1599 aaKnown RBP20.56■□□□□ 0.88
PPCDC-210ENST00000568649 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
PPCDC-210ENST00000568649 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
PPCDC-210ENST00000568649 WIZO95785 1651 aa20.45■□□□□ 0.86
PPCDC-210ENST00000568649 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
PPCDC-210ENST00000568649 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
PPCDC-210ENST00000568649 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
PPCDC-210ENST00000568649 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
PPCDC-210ENST00000568649 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
PPCDC-210ENST00000568649 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
PPCDC-210ENST00000568649 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
PPCDC-210ENST00000568649 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
PPCDC-210ENST00000568649 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
PPCDC-210ENST00000568649 CFTRP13569 1480 aa19.73■□□□□ 0.75
PPCDC-210ENST00000568649 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
PPCDC-210ENST00000568649 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
PPCDC-210ENST00000568649 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
PPCDC-210ENST00000568649 NESP48681 1621 aa19.58■□□□□ 0.73
PPCDC-210ENST00000568649 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
PPCDC-210ENST00000568649 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
PPCDC-210ENST00000568649 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
PPCDC-210ENST00000568649 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
PPCDC-210ENST00000568649 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
PPCDC-210ENST00000568649 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
PPCDC-210ENST00000568649 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
PPCDC-210ENST00000568649 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
PPCDC-210ENST00000568649 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.68
PPCDC-210ENST00000568649 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
PPCDC-210ENST00000568649 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
PPCDC-210ENST00000568649 CUX1P39880 1505 aa19.3■□□□□ 0.68
PPCDC-210ENST00000568649 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
PPCDC-210ENST00000568649 URB2Q14146 1524 aaKnown RBP19.25■□□□□ 0.67
PPCDC-210ENST00000568649 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
PPCDC-210ENST00000568649 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
PPCDC-210ENST00000568649 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
PPCDC-210ENST00000568649 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
PPCDC-210ENST00000568649 WDR62O43379 1518 aa19.16■□□□□ 0.66
PPCDC-210ENST00000568649 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
PPCDC-210ENST00000568649 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
PPCDC-210ENST00000568649 SOGA1O94964 1423 aa19.05■□□□□ 0.64
PPCDC-210ENST00000568649 CUX2O14529 1486 aa19.02■□□□□ 0.63
PPCDC-210ENST00000568649 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
PPCDC-210ENST00000568649 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
PPCDC-210ENST00000568649 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
PPCDC-210ENST00000568649 EEA1Q15075 1411 aa19■□□□□ 0.63
PPCDC-210ENST00000568649 WDR97A6NE52 1622 aa18.99■□□□□ 0.63
PPCDC-210ENST00000568649 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
PPCDC-210ENST00000568649 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
PPCDC-210ENST00000568649 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
PPCDC-210ENST00000568649 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
PPCDC-210ENST00000568649 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
PPCDC-210ENST00000568649 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
PPCDC-210ENST00000568649 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
PPCDC-210ENST00000568649 IGF1RP08069 1367 aa18.83■□□□□ 0.61
PPCDC-210ENST00000568649 GAPVD1Q14C86 1478 aa18.83■□□□□ 0.6
PPCDC-210ENST00000568649 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
PPCDC-210ENST00000568649 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.6
PPCDC-210ENST00000568649 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
PPCDC-210ENST00000568649 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
PPCDC-210ENST00000568649 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
PPCDC-210ENST00000568649 PRXQ9BXM0 1461 aa18.76■□□□□ 0.59
PPCDC-210ENST00000568649 KIF21BO75037 1637 aa18.75■□□□□ 0.59
PPCDC-210ENST00000568649 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
PPCDC-210ENST00000568649 CUL7Q14999 1698 aa18.73■□□□□ 0.59
PPCDC-210ENST00000568649 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
PPCDC-210ENST00000568649 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
PPCDC-210ENST00000568649 GOLGA3Q08378 1498 aa18.66■□□□□ 0.58
PPCDC-210ENST00000568649 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
PPCDC-210ENST00000568649 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
PPCDC-210ENST00000568649 MAGI1Q96QZ7 1491 aaPredicted RBP18.64■□□□□ 0.57
PPCDC-210ENST00000568649 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
PPCDC-210ENST00000568649 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
PPCDC-210ENST00000568649 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
PPCDC-210ENST00000568649 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
PPCDC-210ENST00000568649 SYNJ2O15056 1496 aa18.55■□□□□ 0.56
PPCDC-210ENST00000568649 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
PPCDC-210ENST00000568649 GRIN2AQ12879 1464 aa18.5■□□□□ 0.55
PPCDC-210ENST00000568649 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
PPCDC-210ENST00000568649 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
PPCDC-210ENST00000568649 CHD1O14646 1710 aa18.45■□□□□ 0.54
PPCDC-210ENST00000568649 FBLN2P98095 1184 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms