RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
NEIL1-219ENST00000568519 ABCC9O60706 1549 aa30.88■■■□□ 2.53
NEIL1-219ENST00000568519 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
NEIL1-219ENST00000568519 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
NEIL1-219ENST00000568519 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
NEIL1-219ENST00000568519 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
NEIL1-219ENST00000568519 NACADO15069 1562 aa28.66■■■□□ 2.18
NEIL1-219ENST00000568519 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
NEIL1-219ENST00000568519 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
NEIL1-219ENST00000568519 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
NEIL1-219ENST00000568519 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
NEIL1-219ENST00000568519 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
NEIL1-219ENST00000568519 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
NEIL1-219ENST00000568519 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.05
NEIL1-219ENST00000568519 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
NEIL1-219ENST00000568519 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
NEIL1-219ENST00000568519 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
NEIL1-219ENST00000568519 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
NEIL1-219ENST00000568519 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
NEIL1-219ENST00000568519 CUX2O14529 1486 aa26.64■■□□□ 1.86
NEIL1-219ENST00000568519 ERCC6Q03468 1493 aa26.59■■□□□ 1.85
NEIL1-219ENST00000568519 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
NEIL1-219ENST00000568519 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
NEIL1-219ENST00000568519 NESP48681 1621 aa26.43■■□□□ 1.82
NEIL1-219ENST00000568519 SMARCA4P51532 1647 aa26.42■■□□□ 1.82
NEIL1-219ENST00000568519 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
NEIL1-219ENST00000568519 PEG3Q9GZU2 1588 aa26.26■■□□□ 1.79
NEIL1-219ENST00000568519 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
NEIL1-219ENST00000568519 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
NEIL1-219ENST00000568519 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
NEIL1-219ENST00000568519 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
NEIL1-219ENST00000568519 BAZ1BQ9UIG0 1483 aaKnown RBP26.09■■□□□ 1.77
NEIL1-219ENST00000568519 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
NEIL1-219ENST00000568519 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
NEIL1-219ENST00000568519 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
NEIL1-219ENST00000568519 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
NEIL1-219ENST00000568519 WIZO95785 1651 aa25.95■■□□□ 1.74
NEIL1-219ENST00000568519 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
NEIL1-219ENST00000568519 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
NEIL1-219ENST00000568519 MRC2Q9UBG0 1479 aa25.68■■□□□ 1.7
NEIL1-219ENST00000568519 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
NEIL1-219ENST00000568519 WDR62O43379 1518 aa25.64■■□□□ 1.7
NEIL1-219ENST00000568519 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
NEIL1-219ENST00000568519 FANCD2Q9BXW9 1451 aa25.42■■□□□ 1.66
NEIL1-219ENST00000568519 SUPT5HO00267 1087 aaKnown RBP25.41■■□□□ 1.66
NEIL1-219ENST00000568519 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
NEIL1-219ENST00000568519 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
NEIL1-219ENST00000568519 CFTRP13569 1480 aa25.34■■□□□ 1.65
NEIL1-219ENST00000568519 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
NEIL1-219ENST00000568519 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
NEIL1-219ENST00000568519 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
NEIL1-219ENST00000568519 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
NEIL1-219ENST00000568519 PRDM2Q13029 1718 aa25.22■■□□□ 1.63
NEIL1-219ENST00000568519 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
NEIL1-219ENST00000568519 ARHGEF11O15085 1522 aa25.05■■□□□ 1.6
NEIL1-219ENST00000568519 IFT140Q96RY7 1462 aa24.95■■□□□ 1.58
NEIL1-219ENST00000568519 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
NEIL1-219ENST00000568519 EIF4G3O43432 1585 aaKnown RBP24.9■■□□□ 1.58
NEIL1-219ENST00000568519 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
NEIL1-219ENST00000568519 CHD1O14646 1710 aa24.86■■□□□ 1.57
NEIL1-219ENST00000568519 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
NEIL1-219ENST00000568519 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
NEIL1-219ENST00000568519 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
NEIL1-219ENST00000568519 TRHP20396 242 aaPredicted RBP24.78■■□□□ 1.56
NEIL1-219ENST00000568519 DNMBPQ6XZF7 1577 aa24.76■■□□□ 1.55
NEIL1-219ENST00000568519 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
NEIL1-219ENST00000568519 FBLN2P98095 1184 aa24.71■■□□□ 1.55
NEIL1-219ENST00000568519 POLA1P09884 1462 aaPredicted RBP24.62■■□□□ 1.53
NEIL1-219ENST00000568519 RAD54L2Q9Y4B4 1467 aa24.62■■□□□ 1.53
NEIL1-219ENST00000568519 CUX1P39880 1505 aa24.61■■□□□ 1.53
NEIL1-219ENST00000568519 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
NEIL1-219ENST00000568519 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
NEIL1-219ENST00000568519 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
NEIL1-219ENST00000568519 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
NEIL1-219ENST00000568519 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
NEIL1-219ENST00000568519 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
NEIL1-219ENST00000568519 FGD5Q6ZNL6 1462 aa24.49■■□□□ 1.51
NEIL1-219ENST00000568519 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
NEIL1-219ENST00000568519 SOGA1O94964 1423 aa24.46■■□□□ 1.51
NEIL1-219ENST00000568519 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
NEIL1-219ENST00000568519 AEBP2Q6ZN18 517 aaPredicted RBP24.37■■□□□ 1.49
NEIL1-219ENST00000568519 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
NEIL1-219ENST00000568519 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.49
NEIL1-219ENST00000568519 MAGI1Q96QZ7 1491 aaPredicted RBP24.3■■□□□ 1.48
NEIL1-219ENST00000568519 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
NEIL1-219ENST00000568519 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
NEIL1-219ENST00000568519 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
NEIL1-219ENST00000568519 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
NEIL1-219ENST00000568519 ERCC6L2Q5T890 1561 aa24.22■■□□□ 1.47
NEIL1-219ENST00000568519 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
NEIL1-219ENST00000568519 ERICH3Q5RHP9 1530 aa24.07■■□□□ 1.44
NEIL1-219ENST00000568519 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
NEIL1-219ENST00000568519 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
NEIL1-219ENST00000568519 GRIN2AQ12879 1464 aa24■■□□□ 1.43
NEIL1-219ENST00000568519 KIF13AQ9H1H9 1805 aa23.96■■□□□ 1.43
NEIL1-219ENST00000568519 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
NEIL1-219ENST00000568519 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
NEIL1-219ENST00000568519 NUP160Q12769 1436 aa23.93■■□□□ 1.42
NEIL1-219ENST00000568519 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
NEIL1-219ENST00000568519 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms