RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, humanhuman

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-211ENST00000568329 NISCHQ9Y2I1 1504 aa35.81■■■■□ 3.32
CSK-211ENST00000568329 CCDC180Q9P1Z9 1646 aa31.54■■■□□ 2.64
CSK-211ENST00000568329 ABCC9O60706 1549 aa30.1■■■□□ 2.41
CSK-211ENST00000568329 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.4
CSK-211ENST00000568329 DCAF1Q9Y4B6 1507 aa29.69■■■□□ 2.34
CSK-211ENST00000568329 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
CSK-211ENST00000568329 DCAF8L2P0C7V8 631 aa29.52■■■□□ 2.32
CSK-211ENST00000568329 NACADO15069 1562 aa29.45■■■□□ 2.31
CSK-211ENST00000568329 RB1CC1Q8TDY2 1594 aa29.29■■■□□ 2.28
CSK-211ENST00000568329 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
CSK-211ENST00000568329 SHROOM4Q9ULL8 1493 aa28.71■■■□□ 2.19
CSK-211ENST00000568329 UNC13AQ9UPW8 1703 aa28.66■■■□□ 2.18
CSK-211ENST00000568329 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
CSK-211ENST00000568329 PABPN1Q86U42 306 aaKnown RBP eCLIP28.22■■■□□ 2.11
CSK-211ENST00000568329 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
CSK-211ENST00000568329 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
CSK-211ENST00000568329 SMARCA4P51532 1647 aa27.64■■■□□ 2.02
CSK-211ENST00000568329 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
CSK-211ENST00000568329 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
CSK-211ENST00000568329 RSF1Q96T23 1441 aaPredicted RBP27.56■■■□□ 2
CSK-211ENST00000568329 PEG3Q9GZU2 1588 aa27.38■■□□□ 1.97
CSK-211ENST00000568329 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
CSK-211ENST00000568329 WIZO95785 1651 aa27.35■■□□□ 1.97
CSK-211ENST00000568329 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
CSK-211ENST00000568329 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
CSK-211ENST00000568329 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
CSK-211ENST00000568329 NCAPD3P42695 1498 aa27.16■■□□□ 1.94
CSK-211ENST00000568329 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
CSK-211ENST00000568329 HMGXB3Q12766 1538 aa27.12■■□□□ 1.93
CSK-211ENST00000568329 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
CSK-211ENST00000568329 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
CSK-211ENST00000568329 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
CSK-211ENST00000568329 CFTRP13569 1480 aa26.42■■□□□ 1.82
CSK-211ENST00000568329 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.82
CSK-211ENST00000568329 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
CSK-211ENST00000568329 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
CSK-211ENST00000568329 NESP48681 1621 aa26.27■■□□□ 1.8
CSK-211ENST00000568329 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
CSK-211ENST00000568329 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
CSK-211ENST00000568329 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
CSK-211ENST00000568329 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
CSK-211ENST00000568329 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
CSK-211ENST00000568329 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
CSK-211ENST00000568329 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
CSK-211ENST00000568329 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
CSK-211ENST00000568329 ERCC6Q03468 1493 aa25.88■■□□□ 1.73
CSK-211ENST00000568329 CUX1P39880 1505 aa25.87■■□□□ 1.73
CSK-211ENST00000568329 TOP2BQ02880 1626 aa25.84■■□□□ 1.73
CSK-211ENST00000568329 BIVM-ERCC5R4GMW8 1640 aa25.84■■□□□ 1.73
CSK-211ENST00000568329 TRIM41Q8WV44 630 aa25.84■■□□□ 1.73
CSK-211ENST00000568329 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
CSK-211ENST00000568329 MRC2Q9UBG0 1479 aa25.81■■□□□ 1.72
CSK-211ENST00000568329 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
CSK-211ENST00000568329 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
CSK-211ENST00000568329 THOC2Q8NI27 1593 aaKnown RBP25.75■■□□□ 1.71
CSK-211ENST00000568329 WDR62O43379 1518 aa25.72■■□□□ 1.71
CSK-211ENST00000568329 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
CSK-211ENST00000568329 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
CSK-211ENST00000568329 SOGA1O94964 1423 aa25.49■■□□□ 1.67
CSK-211ENST00000568329 CUX2O14529 1486 aa25.49■■□□□ 1.67
CSK-211ENST00000568329 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
CSK-211ENST00000568329 ABCA10Q8WWZ4 1543 aa25.46■■□□□ 1.67
CSK-211ENST00000568329 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
CSK-211ENST00000568329 WDR97A6NE52 1622 aa25.44■■□□□ 1.66
CSK-211ENST00000568329 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
CSK-211ENST00000568329 EEA1Q15075 1411 aa25.39■■□□□ 1.65
CSK-211ENST00000568329 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
CSK-211ENST00000568329 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
CSK-211ENST00000568329 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
CSK-211ENST00000568329 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
CSK-211ENST00000568329 TDRD9Q8NDG6 1382 aaKnown RBP25.25■■□□□ 1.63
CSK-211ENST00000568329 ZNF608Q9ULD9 1512 aaPredicted RBP25.25■■□□□ 1.63
CSK-211ENST00000568329 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
CSK-211ENST00000568329 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.63
CSK-211ENST00000568329 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.623e-6■■■■□ 24.7
CSK-211ENST00000568329 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
CSK-211ENST00000568329 ERICH3Q5RHP9 1530 aa25.16■■□□□ 1.62
CSK-211ENST00000568329 IGF1RP08069 1367 aa25.15■■□□□ 1.62
CSK-211ENST00000568329 PBRM1Q86U86 1689 aa25.15■■□□□ 1.62
CSK-211ENST00000568329 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
CSK-211ENST00000568329 CUL7Q14999 1698 aa25.09■■□□□ 1.61
CSK-211ENST00000568329 PRXQ9BXM0 1461 aa25.08■■□□□ 1.61
CSK-211ENST00000568329 KIF21BO75037 1637 aa25.08■■□□□ 1.6
CSK-211ENST00000568329 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
CSK-211ENST00000568329 ADAMTS12P58397 1594 aa25■■□□□ 1.59
CSK-211ENST00000568329 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
CSK-211ENST00000568329 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
CSK-211ENST00000568329 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
CSK-211ENST00000568329 GOLGA3Q08378 1498 aa24.97■■□□□ 1.59
CSK-211ENST00000568329 RAPGEF2Q9Y4G8 1499 aa24.97■■□□□ 1.59
CSK-211ENST00000568329 FHAD1B1AJZ9 1412 aa24.96■■□□□ 1.59
CSK-211ENST00000568329 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
CSK-211ENST00000568329 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
CSK-211ENST00000568329 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
CSK-211ENST00000568329 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
CSK-211ENST00000568329 UBTFP17480 764 aaKnown RBP24.78■■□□□ 1.56
CSK-211ENST00000568329 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
CSK-211ENST00000568329 CHD1O14646 1710 aa24.73■■□□□ 1.55
CSK-211ENST00000568329 CTTNBP2Q8WZ74 1663 aa24.72■■□□□ 1.55
CSK-211ENST00000568329 FBLN2P98095 1184 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms