RNA–Protein interactions for RNA: ENST00000568207.5

PPCDC-209, Transcript of phosphopantothenoylcysteine decarboxylase, humanhuman

TSL 2

Gene PPCDC, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCDC-209ENST00000568207 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
PPCDC-209ENST00000568207 ABCC9O60706 1549 aa24.4■■□□□ 1.5
PPCDC-209ENST00000568207 CCDC180Q9P1Z9 1646 aa24■■□□□ 1.43
PPCDC-209ENST00000568207 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
PPCDC-209ENST00000568207 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
PPCDC-209ENST00000568207 NACADO15069 1562 aa22.86■■□□□ 1.25
PPCDC-209ENST00000568207 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
PPCDC-209ENST00000568207 PABPN1Q86U42 306 aaKnown RBP eCLIP22.75■■□□□ 1.23
PPCDC-209ENST00000568207 MYO15BQ96JP2 1530 aa22.49■■□□□ 1.19
PPCDC-209ENST00000568207 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
PPCDC-209ENST00000568207 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
PPCDC-209ENST00000568207 ZCCHC6Q5VYS8 1495 aaKnown RBP22.09■■□□□ 1.13
PPCDC-209ENST00000568207 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
PPCDC-209ENST00000568207 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
PPCDC-209ENST00000568207 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
PPCDC-209ENST00000568207 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
PPCDC-209ENST00000568207 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
PPCDC-209ENST00000568207 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
PPCDC-209ENST00000568207 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
PPCDC-209ENST00000568207 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
PPCDC-209ENST00000568207 CUX2O14529 1486 aa21.13■□□□□ 0.97
PPCDC-209ENST00000568207 ERCC6Q03468 1493 aa21.09■□□□□ 0.97
PPCDC-209ENST00000568207 ATAD2BQ9ULI0 1458 aa21.05■□□□□ 0.96
PPCDC-209ENST00000568207 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
PPCDC-209ENST00000568207 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
PPCDC-209ENST00000568207 NESP48681 1621 aa20.86■□□□□ 0.93
PPCDC-209ENST00000568207 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
PPCDC-209ENST00000568207 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
PPCDC-209ENST00000568207 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
PPCDC-209ENST00000568207 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
PPCDC-209ENST00000568207 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
PPCDC-209ENST00000568207 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
PPCDC-209ENST00000568207 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
PPCDC-209ENST00000568207 MROH2BQ7Z745 1585 aa20.61■□□□□ 0.89
PPCDC-209ENST00000568207 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
PPCDC-209ENST00000568207 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
PPCDC-209ENST00000568207 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
PPCDC-209ENST00000568207 MRC2Q9UBG0 1479 aa20.42■□□□□ 0.86
PPCDC-209ENST00000568207 WDR62O43379 1518 aa20.34■□□□□ 0.85
PPCDC-209ENST00000568207 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
PPCDC-209ENST00000568207 WIZO95785 1651 aa20.28■□□□□ 0.84
PPCDC-209ENST00000568207 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
PPCDC-209ENST00000568207 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
PPCDC-209ENST00000568207 CFTRP13569 1480 aa20.21■□□□□ 0.83
PPCDC-209ENST00000568207 RSF1Q96T23 1441 aaPredicted RBP20.14■□□□□ 0.81
PPCDC-209ENST00000568207 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
PPCDC-209ENST00000568207 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
PPCDC-209ENST00000568207 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
PPCDC-209ENST00000568207 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
PPCDC-209ENST00000568207 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
PPCDC-209ENST00000568207 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
PPCDC-209ENST00000568207 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
PPCDC-209ENST00000568207 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
PPCDC-209ENST00000568207 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
PPCDC-209ENST00000568207 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
PPCDC-209ENST00000568207 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
PPCDC-209ENST00000568207 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
PPCDC-209ENST00000568207 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
PPCDC-209ENST00000568207 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
PPCDC-209ENST00000568207 FBLN2P98095 1184 aa19.69■□□□□ 0.74
PPCDC-209ENST00000568207 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
PPCDC-209ENST00000568207 EIF4G3O43432 1585 aaKnown RBP19.68■□□□□ 0.74
PPCDC-209ENST00000568207 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
PPCDC-209ENST00000568207 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
PPCDC-209ENST00000568207 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
PPCDC-209ENST00000568207 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
PPCDC-209ENST00000568207 SOGA1O94964 1423 aa19.57■□□□□ 0.72
PPCDC-209ENST00000568207 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
PPCDC-209ENST00000568207 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
PPCDC-209ENST00000568207 CHD1O14646 1710 aa19.51■□□□□ 0.71
PPCDC-209ENST00000568207 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
PPCDC-209ENST00000568207 SNAPC4Q5SXM2 1469 aa19.46■□□□□ 0.71
PPCDC-209ENST00000568207 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
PPCDC-209ENST00000568207 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
PPCDC-209ENST00000568207 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
PPCDC-209ENST00000568207 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
PPCDC-209ENST00000568207 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.69
PPCDC-209ENST00000568207 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
PPCDC-209ENST00000568207 CUX1P39880 1505 aa19.36■□□□□ 0.69
PPCDC-209ENST00000568207 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
PPCDC-209ENST00000568207 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
PPCDC-209ENST00000568207 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
PPCDC-209ENST00000568207 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
PPCDC-209ENST00000568207 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
PPCDC-209ENST00000568207 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
PPCDC-209ENST00000568207 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
PPCDC-209ENST00000568207 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
PPCDC-209ENST00000568207 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
PPCDC-209ENST00000568207 NUP160Q12769 1436 aa19.09■□□□□ 0.65
PPCDC-209ENST00000568207 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
PPCDC-209ENST00000568207 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
PPCDC-209ENST00000568207 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
PPCDC-209ENST00000568207 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
PPCDC-209ENST00000568207 JPH4Q96JJ6 628 aa18.98■□□□□ 0.63
PPCDC-209ENST00000568207 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
PPCDC-209ENST00000568207 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
PPCDC-209ENST00000568207 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
PPCDC-209ENST00000568207 SHROOM2Q13796 1616 aa18.94■□□□□ 0.62
PPCDC-209ENST00000568207 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
PPCDC-209ENST00000568207 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms