RNA–Protein interactions for RNA: ENST00000568006.1

GBP3-211, Transcript of guanylate binding protein 3, humanhuman

TSL 5

Gene GBP3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-211ENST00000568006 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
GBP3-211ENST00000568006 NISCHQ9Y2I1 1504 aa18.18■□□□□ 0.5
GBP3-211ENST00000568006 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
GBP3-211ENST00000568006 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
GBP3-211ENST00000568006 ABCC9O60706 1549 aa15.77■□□□□ 0.11
GBP3-211ENST00000568006 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
GBP3-211ENST00000568006 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
GBP3-211ENST00000568006 NACADO15069 1562 aa15.22■□□□□ 0.03
GBP3-211ENST00000568006 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
GBP3-211ENST00000568006 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
GBP3-211ENST00000568006 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
GBP3-211ENST00000568006 DCAF1Q9Y4B6 1507 aa15.09■□□□□ 0.01
GBP3-211ENST00000568006 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
GBP3-211ENST00000568006 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
GBP3-211ENST00000568006 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
GBP3-211ENST00000568006 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
GBP3-211ENST00000568006 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
GBP3-211ENST00000568006 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
GBP3-211ENST00000568006 FOXD1Q16676 465 aa14.56□□□□□ -0.08
GBP3-211ENST00000568006 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
GBP3-211ENST00000568006 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
GBP3-211ENST00000568006 CC2D2AQ9P2K1 1620 aa14.33□□□□□ -0.12
GBP3-211ENST00000568006 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
GBP3-211ENST00000568006 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
GBP3-211ENST00000568006 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
GBP3-211ENST00000568006 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
GBP3-211ENST00000568006 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
GBP3-211ENST00000568006 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
GBP3-211ENST00000568006 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
GBP3-211ENST00000568006 SMARCA2P51531 1590 aa14□□□□□ -0.17
GBP3-211ENST00000568006 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
GBP3-211ENST00000568006 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
GBP3-211ENST00000568006 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
GBP3-211ENST00000568006 WIZO95785 1651 aa13.84□□□□□ -0.19
GBP3-211ENST00000568006 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
GBP3-211ENST00000568006 ADRA2BP18089 450 aa13.74□□□□□ -0.21
GBP3-211ENST00000568006 PIAS4Q8N2W9 510 aaPredicted RBP13.72□□□□□ -0.21
GBP3-211ENST00000568006 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
GBP3-211ENST00000568006 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
GBP3-211ENST00000568006 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
GBP3-211ENST00000568006 NESP48681 1621 aa13.67□□□□□ -0.22
GBP3-211ENST00000568006 MSH5O43196 834 aa13.66□□□□□ -0.22
GBP3-211ENST00000568006 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.23
GBP3-211ENST00000568006 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
GBP3-211ENST00000568006 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
GBP3-211ENST00000568006 CFTRP13569 1480 aa13.54□□□□□ -0.24
GBP3-211ENST00000568006 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
GBP3-211ENST00000568006 PDS5BQ9NTI5 1447 aa13.53□□□□□ -0.24
GBP3-211ENST00000568006 CUX2O14529 1486 aa13.52□□□□□ -0.25
GBP3-211ENST00000568006 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
GBP3-211ENST00000568006 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
GBP3-211ENST00000568006 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
GBP3-211ENST00000568006 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
GBP3-211ENST00000568006 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
GBP3-211ENST00000568006 WDR62O43379 1518 aa13.41□□□□□ -0.26
GBP3-211ENST00000568006 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
GBP3-211ENST00000568006 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
GBP3-211ENST00000568006 ABCC8Q09428 1581 aa13.23□□□□□ -0.29
GBP3-211ENST00000568006 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
GBP3-211ENST00000568006 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
GBP3-211ENST00000568006 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
GBP3-211ENST00000568006 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
GBP3-211ENST00000568006 CUX1P39880 1505 aa13.13□□□□□ -0.31
GBP3-211ENST00000568006 POLA1P09884 1462 aaPredicted RBP13.12□□□□□ -0.31
GBP3-211ENST00000568006 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.31
GBP3-211ENST00000568006 DNAJC5Q9H3Z4 198 aa13.08□□□□□ -0.32
GBP3-211ENST00000568006 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
GBP3-211ENST00000568006 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
GBP3-211ENST00000568006 WDR97A6NE52 1622 aa13.05□□□□□ -0.32
GBP3-211ENST00000568006 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
GBP3-211ENST00000568006 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
GBP3-211ENST00000568006 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
GBP3-211ENST00000568006 SOGA1O94964 1423 aa13.02□□□□□ -0.33
GBP3-211ENST00000568006 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
GBP3-211ENST00000568006 WRNQ14191 1432 aaPredicted RBP eCLIP13□□□□□ -0.33
GBP3-211ENST00000568006 AQRO60306 1485 aaKnown RBP eCLIP12.97□□□□□ -0.33
GBP3-211ENST00000568006 ABCA10Q8WWZ4 1543 aa12.97□□□□□ -0.33
GBP3-211ENST00000568006 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
GBP3-211ENST00000568006 TDRD9Q8NDG6 1382 aaKnown RBP12.93□□□□□ -0.34
GBP3-211ENST00000568006 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
GBP3-211ENST00000568006 CHD1O14646 1710 aa12.9□□□□□ -0.34
GBP3-211ENST00000568006 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
GBP3-211ENST00000568006 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
GBP3-211ENST00000568006 MAGI1Q96QZ7 1491 aaPredicted RBP12.89□□□□□ -0.35
GBP3-211ENST00000568006 SNAPC4Q5SXM2 1469 aa12.88□□□□□ -0.35
GBP3-211ENST00000568006 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
GBP3-211ENST00000568006 POTEDQ86YR6 584 aa12.85□□□□□ -0.35
GBP3-211ENST00000568006 SYNJ2O15056 1496 aa12.83□□□□□ -0.36
GBP3-211ENST00000568006 ERICH3Q5RHP9 1530 aa12.82□□□□□ -0.36
GBP3-211ENST00000568006 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
GBP3-211ENST00000568006 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
GBP3-211ENST00000568006 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
GBP3-211ENST00000568006 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
GBP3-211ENST00000568006 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
GBP3-211ENST00000568006 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
GBP3-211ENST00000568006 GRIN2AQ12879 1464 aa12.74□□□□□ -0.37
GBP3-211ENST00000568006 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
GBP3-211ENST00000568006 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
GBP3-211ENST00000568006 CHMP7Q8WUX9 453 aaPredicted RBP12.73□□□□□ -0.37
GBP3-211ENST00000568006 FBLN2P98095 1184 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms