RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.9
LINC01228-201ENST00000567966 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
LINC01228-201ENST00000567966 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
LINC01228-201ENST00000567966 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
LINC01228-201ENST00000567966 ABCC9O60706 1549 aa24.05■■□□□ 1.44
LINC01228-201ENST00000567966 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.25
LINC01228-201ENST00000567966 NACADO15069 1562 aa22.75■■□□□ 1.23
LINC01228-201ENST00000567966 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
LINC01228-201ENST00000567966 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
LINC01228-201ENST00000567966 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
LINC01228-201ENST00000567966 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
LINC01228-201ENST00000567966 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
LINC01228-201ENST00000567966 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
LINC01228-201ENST00000567966 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
LINC01228-201ENST00000567966 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
LINC01228-201ENST00000567966 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
LINC01228-201ENST00000567966 SHROOM4Q9ULL8 1493 aa21.86■■□□□ 1.09
LINC01228-201ENST00000567966 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
LINC01228-201ENST00000567966 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
LINC01228-201ENST00000567966 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
LINC01228-201ENST00000567966 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
LINC01228-201ENST00000567966 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
LINC01228-201ENST00000567966 SMARCA4P51532 1647 aa21■□□□□ 0.95
LINC01228-201ENST00000567966 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
LINC01228-201ENST00000567966 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
LINC01228-201ENST00000567966 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
LINC01228-201ENST00000567966 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.93
LINC01228-201ENST00000567966 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
LINC01228-201ENST00000567966 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
LINC01228-201ENST00000567966 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
LINC01228-201ENST00000567966 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
LINC01228-201ENST00000567966 NESP48681 1621 aa20.72■□□□□ 0.91
LINC01228-201ENST00000567966 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
LINC01228-201ENST00000567966 CUX2O14529 1486 aa20.61■□□□□ 0.89
LINC01228-201ENST00000567966 WIZO95785 1651 aa20.58■□□□□ 0.88
LINC01228-201ENST00000567966 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
LINC01228-201ENST00000567966 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
LINC01228-201ENST00000567966 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
LINC01228-201ENST00000567966 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
LINC01228-201ENST00000567966 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
LINC01228-201ENST00000567966 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
LINC01228-201ENST00000567966 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
LINC01228-201ENST00000567966 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.83
LINC01228-201ENST00000567966 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
LINC01228-201ENST00000567966 CFTRP13569 1480 aa20.18■□□□□ 0.82
LINC01228-201ENST00000567966 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
LINC01228-201ENST00000567966 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
LINC01228-201ENST00000567966 WDR62O43379 1518 aa20.17■□□□□ 0.82
LINC01228-201ENST00000567966 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
LINC01228-201ENST00000567966 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
LINC01228-201ENST00000567966 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
LINC01228-201ENST00000567966 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
LINC01228-201ENST00000567966 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
LINC01228-201ENST00000567966 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
LINC01228-201ENST00000567966 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
LINC01228-201ENST00000567966 DNMBPQ6XZF7 1577 aa19.73■□□□□ 0.75
LINC01228-201ENST00000567966 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
LINC01228-201ENST00000567966 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
LINC01228-201ENST00000567966 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
LINC01228-201ENST00000567966 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
LINC01228-201ENST00000567966 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
LINC01228-201ENST00000567966 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
LINC01228-201ENST00000567966 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
LINC01228-201ENST00000567966 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.73
LINC01228-201ENST00000567966 RAD54L2Q9Y4B4 1467 aa19.57■□□□□ 0.72
LINC01228-201ENST00000567966 CUX1P39880 1505 aa19.54■□□□□ 0.72
LINC01228-201ENST00000567966 SOGA1O94964 1423 aa19.51■□□□□ 0.71
LINC01228-201ENST00000567966 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
LINC01228-201ENST00000567966 CHD1O14646 1710 aa19.5■□□□□ 0.71
LINC01228-201ENST00000567966 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
LINC01228-201ENST00000567966 RIMBP3CA6NJZ7 1639 aa19.49■□□□□ 0.71
LINC01228-201ENST00000567966 RIMBP3BA6NNM3 1639 aa19.49■□□□□ 0.71
LINC01228-201ENST00000567966 RIMBP3Q9UFD9 1639 aa19.49■□□□□ 0.71
LINC01228-201ENST00000567966 FOXD1Q16676 465 aa19.48■□□□□ 0.71
LINC01228-201ENST00000567966 FBLN2P98095 1184 aa19.42■□□□□ 0.7
LINC01228-201ENST00000567966 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
LINC01228-201ENST00000567966 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
LINC01228-201ENST00000567966 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
LINC01228-201ENST00000567966 GRIN2BQ13224 1484 aa19.32■□□□□ 0.68
LINC01228-201ENST00000567966 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
LINC01228-201ENST00000567966 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
LINC01228-201ENST00000567966 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
LINC01228-201ENST00000567966 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
LINC01228-201ENST00000567966 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
LINC01228-201ENST00000567966 CHMP7Q8WUX9 453 aaPredicted RBP19.27■□□□□ 0.68
LINC01228-201ENST00000567966 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
LINC01228-201ENST00000567966 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
LINC01228-201ENST00000567966 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
LINC01228-201ENST00000567966 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
LINC01228-201ENST00000567966 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
LINC01228-201ENST00000567966 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
LINC01228-201ENST00000567966 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
LINC01228-201ENST00000567966 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
LINC01228-201ENST00000567966 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
LINC01228-201ENST00000567966 GRIN2AQ12879 1464 aa19.08■□□□□ 0.64
LINC01228-201ENST00000567966 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
LINC01228-201ENST00000567966 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
LINC01228-201ENST00000567966 ERICH3Q5RHP9 1530 aa19.02■□□□□ 0.64
LINC01228-201ENST00000567966 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
LINC01228-201ENST00000567966 NUP160Q12769 1436 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms