RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
ABCA3-205ENST00000567910 CCDC180Q9P1Z9 1646 aa23.06■■□□□ 1.28
ABCA3-205ENST00000567910 ABCC9O60706 1549 aa22.52■■□□□ 1.19
ABCA3-205ENST00000567910 ZCCHC6Q5VYS8 1495 aaKnown RBP21.68■■□□□ 1.06
ABCA3-205ENST00000567910 NACADO15069 1562 aa21.64■■□□□ 1.05
ABCA3-205ENST00000567910 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
ABCA3-205ENST00000567910 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
ABCA3-205ENST00000567910 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
ABCA3-205ENST00000567910 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
ABCA3-205ENST00000567910 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
ABCA3-205ENST00000567910 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
ABCA3-205ENST00000567910 SCRIBQ14160 1630 aa21.07■□□□□ 0.96
ABCA3-205ENST00000567910 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
ABCA3-205ENST00000567910 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
ABCA3-205ENST00000567910 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
ABCA3-205ENST00000567910 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
ABCA3-205ENST00000567910 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
ABCA3-205ENST00000567910 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
ABCA3-205ENST00000567910 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
ABCA3-205ENST00000567910 BAZ1AQ9NRL2 1556 aaPredicted RBP20.09■□□□□ 0.81
ABCA3-205ENST00000567910 MROH2BQ7Z745 1585 aa20.06■□□□□ 0.8
ABCA3-205ENST00000567910 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
ABCA3-205ENST00000567910 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
ABCA3-205ENST00000567910 PEG3Q9GZU2 1588 aa19.97■□□□□ 0.79
ABCA3-205ENST00000567910 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
ABCA3-205ENST00000567910 HMGXB3Q12766 1538 aa19.9■□□□□ 0.78
ABCA3-205ENST00000567910 WIZO95785 1651 aa19.85■□□□□ 0.77
ABCA3-205ENST00000567910 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
ABCA3-205ENST00000567910 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
ABCA3-205ENST00000567910 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
ABCA3-205ENST00000567910 NESP48681 1621 aa19.55■□□□□ 0.72
ABCA3-205ENST00000567910 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
ABCA3-205ENST00000567910 CCDC88BA6NC98 1476 aa19.38■□□□□ 0.69
ABCA3-205ENST00000567910 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
ABCA3-205ENST00000567910 ERCC6Q03468 1493 aa19.32■□□□□ 0.68
ABCA3-205ENST00000567910 KIF21AQ7Z4S6 1674 aa19.32■□□□□ 0.68
ABCA3-205ENST00000567910 CFTRP13569 1480 aa19.31■□□□□ 0.68
ABCA3-205ENST00000567910 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
ABCA3-205ENST00000567910 THOC2Q8NI27 1593 aaKnown RBP19.25■□□□□ 0.67
ABCA3-205ENST00000567910 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
ABCA3-205ENST00000567910 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
ABCA3-205ENST00000567910 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
ABCA3-205ENST00000567910 CUX2O14529 1486 aa19.14■□□□□ 0.65
ABCA3-205ENST00000567910 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
ABCA3-205ENST00000567910 MRC2Q9UBG0 1479 aa19.1■□□□□ 0.65
ABCA3-205ENST00000567910 WDR62O43379 1518 aa19.08■□□□□ 0.64
ABCA3-205ENST00000567910 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
ABCA3-205ENST00000567910 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
ABCA3-205ENST00000567910 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
ABCA3-205ENST00000567910 CUX1P39880 1505 aa18.81■□□□□ 0.6
ABCA3-205ENST00000567910 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
ABCA3-205ENST00000567910 POLA1P09884 1462 aaPredicted RBP18.75■□□□□ 0.59
ABCA3-205ENST00000567910 TARBP1Q13395 1621 aaKnown RBP18.73■□□□□ 0.59
ABCA3-205ENST00000567910 ZNF608Q9ULD9 1512 aaPredicted RBP18.72■□□□□ 0.59
ABCA3-205ENST00000567910 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
ABCA3-205ENST00000567910 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
ABCA3-205ENST00000567910 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
ABCA3-205ENST00000567910 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
ABCA3-205ENST00000567910 BIVM-ERCC5R4GMW8 1640 aa18.65■□□□□ 0.58
ABCA3-205ENST00000567910 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
ABCA3-205ENST00000567910 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
ABCA3-205ENST00000567910 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
ABCA3-205ENST00000567910 SOGA1O94964 1423 aa18.62■□□□□ 0.57
ABCA3-205ENST00000567910 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
ABCA3-205ENST00000567910 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.569e-7■■■■■ 31.2
ABCA3-205ENST00000567910 TDRD9Q8NDG6 1382 aaKnown RBP18.53■□□□□ 0.56
ABCA3-205ENST00000567910 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
ABCA3-205ENST00000567910 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
ABCA3-205ENST00000567910 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
ABCA3-205ENST00000567910 PBRM1Q86U86 1689 aa18.43■□□□□ 0.54
ABCA3-205ENST00000567910 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
ABCA3-205ENST00000567910 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
ABCA3-205ENST00000567910 GRIN2BQ13224 1484 aa18.39■□□□□ 0.54
ABCA3-205ENST00000567910 CHD1O14646 1710 aa18.39■□□□□ 0.53
ABCA3-205ENST00000567910 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
ABCA3-205ENST00000567910 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
ABCA3-205ENST00000567910 ADAMTS12P58397 1594 aa18.29■□□□□ 0.52
ABCA3-205ENST00000567910 SYNJ2O15056 1496 aa18.28■□□□□ 0.52
ABCA3-205ENST00000567910 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.51
ABCA3-205ENST00000567910 FBLN2P98095 1184 aa18.23■□□□□ 0.51
ABCA3-205ENST00000567910 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
ABCA3-205ENST00000567910 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
ABCA3-205ENST00000567910 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
ABCA3-205ENST00000567910 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
ABCA3-205ENST00000567910 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
ABCA3-205ENST00000567910 IGF1RP08069 1367 aa18.18■□□□□ 0.5
ABCA3-205ENST00000567910 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
ABCA3-205ENST00000567910 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
ABCA3-205ENST00000567910 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
ABCA3-205ENST00000567910 NUP160Q12769 1436 aa18.13■□□□□ 0.49
ABCA3-205ENST00000567910 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
ABCA3-205ENST00000567910 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
ABCA3-205ENST00000567910 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
ABCA3-205ENST00000567910 CUL7Q14999 1698 aa18.12■□□□□ 0.49
ABCA3-205ENST00000567910 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
ABCA3-205ENST00000567910 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
ABCA3-205ENST00000567910 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
ABCA3-205ENST00000567910 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
ABCA3-205ENST00000567910 ERCC6L2Q5T890 1561 aa18■□□□□ 0.47
ABCA3-205ENST00000567910 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms