RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 NISCHQ9Y2I1 1504 aa26.06■■□□□ 1.76
NSMCE1-213ENST00000567710 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
NSMCE1-213ENST00000567710 ABCC9O60706 1549 aa22.6■■□□□ 1.21
NSMCE1-213ENST00000567710 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
NSMCE1-213ENST00000567710 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
NSMCE1-213ENST00000567710 NACADO15069 1562 aa21.74■■□□□ 1.07
NSMCE1-213ENST00000567710 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
NSMCE1-213ENST00000567710 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
NSMCE1-213ENST00000567710 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
NSMCE1-213ENST00000567710 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
NSMCE1-213ENST00000567710 PABPN1Q86U42 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
NSMCE1-213ENST00000567710 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
NSMCE1-213ENST00000567710 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
NSMCE1-213ENST00000567710 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
NSMCE1-213ENST00000567710 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
NSMCE1-213ENST00000567710 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
NSMCE1-213ENST00000567710 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
NSMCE1-213ENST00000567710 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
NSMCE1-213ENST00000567710 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
NSMCE1-213ENST00000567710 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
NSMCE1-213ENST00000567710 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
NSMCE1-213ENST00000567710 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
NSMCE1-213ENST00000567710 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
NSMCE1-213ENST00000567710 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
NSMCE1-213ENST00000567710 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
NSMCE1-213ENST00000567710 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
NSMCE1-213ENST00000567710 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
NSMCE1-213ENST00000567710 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
NSMCE1-213ENST00000567710 WIZO95785 1651 aa19.86■□□□□ 0.77
NSMCE1-213ENST00000567710 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
NSMCE1-213ENST00000567710 NESP48681 1621 aa19.58■□□□□ 0.72
NSMCE1-213ENST00000567710 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
NSMCE1-213ENST00000567710 CADPSQ9ULU8 1353 aa19.49■□□□□ 0.71
NSMCE1-213ENST00000567710 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
NSMCE1-213ENST00000567710 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
NSMCE1-213ENST00000567710 SUPT5HO00267 1087 aaKnown RBP19.41■□□□□ 0.7
NSMCE1-213ENST00000567710 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
NSMCE1-213ENST00000567710 CFTRP13569 1480 aa19.39■□□□□ 0.69
NSMCE1-213ENST00000567710 KIF21AQ7Z4S6 1674 aa19.32■□□□□ 0.68
NSMCE1-213ENST00000567710 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.67
NSMCE1-213ENST00000567710 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
NSMCE1-213ENST00000567710 CUX2O14529 1486 aa19.25■□□□□ 0.67
NSMCE1-213ENST00000567710 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
NSMCE1-213ENST00000567710 MRC2Q9UBG0 1479 aa19.2■□□□□ 0.66
NSMCE1-213ENST00000567710 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
NSMCE1-213ENST00000567710 WDR62O43379 1518 aa19.13■□□□□ 0.65
NSMCE1-213ENST00000567710 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
NSMCE1-213ENST00000567710 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
NSMCE1-213ENST00000567710 ABCC8Q09428 1581 aa18.94■□□□□ 0.62
NSMCE1-213ENST00000567710 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
NSMCE1-213ENST00000567710 CUX1P39880 1505 aa18.84■□□□□ 0.61
NSMCE1-213ENST00000567710 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
NSMCE1-213ENST00000567710 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
NSMCE1-213ENST00000567710 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.59
NSMCE1-213ENST00000567710 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
NSMCE1-213ENST00000567710 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
NSMCE1-213ENST00000567710 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
NSMCE1-213ENST00000567710 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
NSMCE1-213ENST00000567710 SOGA1O94964 1423 aa18.73■□□□□ 0.59
NSMCE1-213ENST00000567710 SYNJ1O43426 1573 aa18.69■□□□□ 0.58
NSMCE1-213ENST00000567710 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
NSMCE1-213ENST00000567710 BIVM-ERCC5R4GMW8 1640 aa18.67■□□□□ 0.58
NSMCE1-213ENST00000567710 EIF4G3O43432 1585 aaKnown RBP18.67■□□□□ 0.58
NSMCE1-213ENST00000567710 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
NSMCE1-213ENST00000567710 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
NSMCE1-213ENST00000567710 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
NSMCE1-213ENST00000567710 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
NSMCE1-213ENST00000567710 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
NSMCE1-213ENST00000567710 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.55
NSMCE1-213ENST00000567710 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
NSMCE1-213ENST00000567710 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
NSMCE1-213ENST00000567710 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
NSMCE1-213ENST00000567710 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
NSMCE1-213ENST00000567710 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
NSMCE1-213ENST00000567710 PBRM1Q86U86 1689 aa18.44■□□□□ 0.54
NSMCE1-213ENST00000567710 FBLN2P98095 1184 aa18.4■□□□□ 0.54
NSMCE1-213ENST00000567710 CHD1O14646 1710 aa18.4■□□□□ 0.54
NSMCE1-213ENST00000567710 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
NSMCE1-213ENST00000567710 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
NSMCE1-213ENST00000567710 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
NSMCE1-213ENST00000567710 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
NSMCE1-213ENST00000567710 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
NSMCE1-213ENST00000567710 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
NSMCE1-213ENST00000567710 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
NSMCE1-213ENST00000567710 IGF1RP08069 1367 aa18.27■□□□□ 0.51
NSMCE1-213ENST00000567710 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
NSMCE1-213ENST00000567710 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
NSMCE1-213ENST00000567710 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
NSMCE1-213ENST00000567710 CUL7Q14999 1698 aa18.19■□□□□ 0.5
NSMCE1-213ENST00000567710 NUP160Q12769 1436 aa18.19■□□□□ 0.5
NSMCE1-213ENST00000567710 CEP170Q5SW79 1584 aa18.17■□□□□ 0.5
NSMCE1-213ENST00000567710 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
NSMCE1-213ENST00000567710 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
NSMCE1-213ENST00000567710 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
NSMCE1-213ENST00000567710 RIMBP3CA6NJZ7 1639 aa18.15■□□□□ 0.5
NSMCE1-213ENST00000567710 RIMBP3BA6NNM3 1639 aa18.15■□□□□ 0.5
NSMCE1-213ENST00000567710 RIMBP3Q9UFD9 1639 aa18.15■□□□□ 0.5
NSMCE1-213ENST00000567710 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
NSMCE1-213ENST00000567710 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
NSMCE1-213ENST00000567710 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms