RNA–Protein interactions for RNA: ENST00000567593.5

CMC2-218, Transcript of C-X9-C motif containing 2, humanhuman

TSL 3

Gene CMC2, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-218ENST00000567593 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
CMC2-218ENST00000567593 ABCC9O60706 1549 aa25.37■■□□□ 1.65
CMC2-218ENST00000567593 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
CMC2-218ENST00000567593 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
CMC2-218ENST00000567593 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
CMC2-218ENST00000567593 NACADO15069 1562 aa23.76■■□□□ 1.39
CMC2-218ENST00000567593 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
CMC2-218ENST00000567593 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
CMC2-218ENST00000567593 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
CMC2-218ENST00000567593 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
CMC2-218ENST00000567593 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
CMC2-218ENST00000567593 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
CMC2-218ENST00000567593 DCAF1Q9Y4B6 1507 aa22.96■■□□□ 1.27
CMC2-218ENST00000567593 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
CMC2-218ENST00000567593 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
CMC2-218ENST00000567593 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
CMC2-218ENST00000567593 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
CMC2-218ENST00000567593 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
CMC2-218ENST00000567593 DNAJC5Q9H3Z4 198 aa22.17■■□□□ 1.14
CMC2-218ENST00000567593 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
CMC2-218ENST00000567593 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
CMC2-218ENST00000567593 CUX2O14529 1486 aa21.9■■□□□ 1.1
CMC2-218ENST00000567593 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
CMC2-218ENST00000567593 SMARCA4P51532 1647 aa21.78■■□□□ 1.08
CMC2-218ENST00000567593 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
CMC2-218ENST00000567593 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
CMC2-218ENST00000567593 NESP48681 1621 aa21.73■■□□□ 1.07
CMC2-218ENST00000567593 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
CMC2-218ENST00000567593 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
CMC2-218ENST00000567593 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
CMC2-218ENST00000567593 THOC2Q8NI27 1593 aaKnown RBP21.51■■□□□ 1.03
CMC2-218ENST00000567593 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
CMC2-218ENST00000567593 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
CMC2-218ENST00000567593 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
CMC2-218ENST00000567593 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.02
CMC2-218ENST00000567593 CADPSQ9ULU8 1353 aa21.3■■□□□ 1
CMC2-218ENST00000567593 WIZO95785 1651 aa21.22■□□□□ 0.99
CMC2-218ENST00000567593 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
CMC2-218ENST00000567593 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
CMC2-218ENST00000567593 WDR62O43379 1518 aa21.16■□□□□ 0.98
CMC2-218ENST00000567593 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
CMC2-218ENST00000567593 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
CMC2-218ENST00000567593 CFTRP13569 1480 aa21■□□□□ 0.95
CMC2-218ENST00000567593 RSF1Q96T23 1441 aaPredicted RBP20.96■□□□□ 0.95
CMC2-218ENST00000567593 AEBP2Q6ZN18 517 aaPredicted RBP20.95■□□□□ 0.94
CMC2-218ENST00000567593 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
CMC2-218ENST00000567593 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
CMC2-218ENST00000567593 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
CMC2-218ENST00000567593 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
CMC2-218ENST00000567593 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
CMC2-218ENST00000567593 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
CMC2-218ENST00000567593 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
CMC2-218ENST00000567593 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
CMC2-218ENST00000567593 RIMBP3CA6NJZ7 1639 aa20.64■□□□□ 0.89
CMC2-218ENST00000567593 RIMBP3BA6NNM3 1639 aa20.64■□□□□ 0.89
CMC2-218ENST00000567593 RIMBP3Q9UFD9 1639 aa20.64■□□□□ 0.89
CMC2-218ENST00000567593 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
CMC2-218ENST00000567593 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
CMC2-218ENST00000567593 EIF4G3O43432 1585 aaKnown RBP20.54■□□□□ 0.88
CMC2-218ENST00000567593 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
CMC2-218ENST00000567593 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
CMC2-218ENST00000567593 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
CMC2-218ENST00000567593 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
CMC2-218ENST00000567593 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
CMC2-218ENST00000567593 FBLN2P98095 1184 aa20.44■□□□□ 0.86
CMC2-218ENST00000567593 CHD1O14646 1710 aa20.42■□□□□ 0.86
CMC2-218ENST00000567593 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
CMC2-218ENST00000567593 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
CMC2-218ENST00000567593 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
CMC2-218ENST00000567593 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
CMC2-218ENST00000567593 SOGA1O94964 1423 aa20.33■□□□□ 0.84
CMC2-218ENST00000567593 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
CMC2-218ENST00000567593 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
CMC2-218ENST00000567593 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
CMC2-218ENST00000567593 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
CMC2-218ENST00000567593 CUX1P39880 1505 aa20.2■□□□□ 0.82
CMC2-218ENST00000567593 CLASP1Q7Z460 1538 aa20.18■□□□□ 0.82
CMC2-218ENST00000567593 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
CMC2-218ENST00000567593 MAGI1Q96QZ7 1491 aaPredicted RBP20.17■□□□□ 0.82
CMC2-218ENST00000567593 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
CMC2-218ENST00000567593 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
CMC2-218ENST00000567593 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
CMC2-218ENST00000567593 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
CMC2-218ENST00000567593 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
CMC2-218ENST00000567593 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
CMC2-218ENST00000567593 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
CMC2-218ENST00000567593 SUPT5HO00267 1087 aaKnown RBP19.96■□□□□ 0.79
CMC2-218ENST00000567593 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
CMC2-218ENST00000567593 ERCC6L2Q5T890 1561 aa19.9■□□□□ 0.78
CMC2-218ENST00000567593 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
CMC2-218ENST00000567593 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
CMC2-218ENST00000567593 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
CMC2-218ENST00000567593 NUP160Q12769 1436 aa19.84■□□□□ 0.77
CMC2-218ENST00000567593 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
CMC2-218ENST00000567593 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
CMC2-218ENST00000567593 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
CMC2-218ENST00000567593 SHROOM2Q13796 1616 aa19.75■□□□□ 0.75
CMC2-218ENST00000567593 ERICH3Q5RHP9 1530 aa19.72■□□□□ 0.75
CMC2-218ENST00000567593 PRG4Q92954 1404 aaPredicted RBP19.69■□□□□ 0.74
CMC2-218ENST00000567593 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms