RNA–Protein interactions for RNA: ENST00000567367.1

KNOP1-204, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene KNOP1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-204ENST00000567367 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
KNOP1-204ENST00000567367 ABCC9O60706 1549 aa27.87■■■□□ 2.05
KNOP1-204ENST00000567367 CCDC180Q9P1Z9 1646 aa27.72■■■□□ 2.03
KNOP1-204ENST00000567367 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
KNOP1-204ENST00000567367 NACADO15069 1562 aa26.29■■□□□ 1.8
KNOP1-204ENST00000567367 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
KNOP1-204ENST00000567367 DCAF8L2P0C7V8 631 aa26.11■■□□□ 1.77
KNOP1-204ENST00000567367 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
KNOP1-204ENST00000567367 MYO15BQ96JP2 1530 aa25.9■■□□□ 1.74
KNOP1-204ENST00000567367 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
KNOP1-204ENST00000567367 BICRAQ9NZM4 1560 aa25.67■■□□□ 1.7
KNOP1-204ENST00000567367 ZCCHC6Q5VYS8 1495 aaKnown RBP25.5■■□□□ 1.67
KNOP1-204ENST00000567367 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
KNOP1-204ENST00000567367 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
KNOP1-204ENST00000567367 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
KNOP1-204ENST00000567367 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
KNOP1-204ENST00000567367 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
KNOP1-204ENST00000567367 EIF4G1Q04637 1599 aaKnown RBP25.08■■□□□ 1.61
KNOP1-204ENST00000567367 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
KNOP1-204ENST00000567367 NCAPD3P42695 1498 aa24.28■■□□□ 1.48
KNOP1-204ENST00000567367 CUX2O14529 1486 aa24.15■■□□□ 1.46
KNOP1-204ENST00000567367 ATAD2BQ9ULI0 1458 aa24.15■■□□□ 1.46
KNOP1-204ENST00000567367 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
KNOP1-204ENST00000567367 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
KNOP1-204ENST00000567367 HMGXB3Q12766 1538 aa24.06■■□□□ 1.44
KNOP1-204ENST00000567367 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
KNOP1-204ENST00000567367 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.43
KNOP1-204ENST00000567367 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
KNOP1-204ENST00000567367 NESP48681 1621 aa23.87■■□□□ 1.41
KNOP1-204ENST00000567367 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
KNOP1-204ENST00000567367 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
KNOP1-204ENST00000567367 MROH2BQ7Z745 1585 aa23.71■■□□□ 1.39
KNOP1-204ENST00000567367 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
KNOP1-204ENST00000567367 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
KNOP1-204ENST00000567367 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
KNOP1-204ENST00000567367 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
KNOP1-204ENST00000567367 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
KNOP1-204ENST00000567367 WIZO95785 1651 aa23.4■■□□□ 1.34
KNOP1-204ENST00000567367 WDR62O43379 1518 aa23.34■■□□□ 1.33
KNOP1-204ENST00000567367 CEP164Q9UPV0 1460 aa23.29■■□□□ 1.32
KNOP1-204ENST00000567367 FANCD2Q9BXW9 1451 aa23.24■■□□□ 1.31
KNOP1-204ENST00000567367 CFTRP13569 1480 aa23.23■■□□□ 1.31
KNOP1-204ENST00000567367 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
KNOP1-204ENST00000567367 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
KNOP1-204ENST00000567367 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
KNOP1-204ENST00000567367 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
KNOP1-204ENST00000567367 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
KNOP1-204ENST00000567367 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
KNOP1-204ENST00000567367 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
KNOP1-204ENST00000567367 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
KNOP1-204ENST00000567367 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
KNOP1-204ENST00000567367 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
KNOP1-204ENST00000567367 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
KNOP1-204ENST00000567367 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
KNOP1-204ENST00000567367 RIMBP3CA6NJZ7 1639 aa22.67■■□□□ 1.22
KNOP1-204ENST00000567367 RIMBP3BA6NNM3 1639 aa22.67■■□□□ 1.22
KNOP1-204ENST00000567367 RIMBP3Q9UFD9 1639 aa22.67■■□□□ 1.22
KNOP1-204ENST00000567367 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
KNOP1-204ENST00000567367 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
KNOP1-204ENST00000567367 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.22e-6■■■□□ 15.1
KNOP1-204ENST00000567367 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
KNOP1-204ENST00000567367 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
KNOP1-204ENST00000567367 FBLN2P98095 1184 aa22.49■■□□□ 1.19
KNOP1-204ENST00000567367 CYB5RLQ6IPT4 315 aa22.49■■□□□ 1.19
KNOP1-204ENST00000567367 SOGA1O94964 1423 aa22.46■■□□□ 1.19
KNOP1-204ENST00000567367 CHD1O14646 1710 aa22.45■■□□□ 1.19
KNOP1-204ENST00000567367 RAD54L2Q9Y4B4 1467 aa22.42■■□□□ 1.18
KNOP1-204ENST00000567367 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
KNOP1-204ENST00000567367 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
KNOP1-204ENST00000567367 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
KNOP1-204ENST00000567367 FGD5Q6ZNL6 1462 aa22.35■■□□□ 1.17
KNOP1-204ENST00000567367 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
KNOP1-204ENST00000567367 SNAPC4Q5SXM2 1469 aa22.32■■□□□ 1.16
KNOP1-204ENST00000567367 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
KNOP1-204ENST00000567367 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
KNOP1-204ENST00000567367 CUX1P39880 1505 aa22.29■■□□□ 1.16
KNOP1-204ENST00000567367 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
KNOP1-204ENST00000567367 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
KNOP1-204ENST00000567367 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
KNOP1-204ENST00000567367 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
KNOP1-204ENST00000567367 GAPVD1Q14C86 1478 aa22.17■■□□□ 1.14
KNOP1-204ENST00000567367 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
KNOP1-204ENST00000567367 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
KNOP1-204ENST00000567367 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
KNOP1-204ENST00000567367 SUPT5HO00267 1087 aaKnown RBP22.05■■□□□ 1.12
KNOP1-204ENST00000567367 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
KNOP1-204ENST00000567367 GRIN2AQ12879 1464 aa21.97■■□□□ 1.11
KNOP1-204ENST00000567367 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
KNOP1-204ENST00000567367 NUP160Q12769 1436 aa21.91■■□□□ 1.1
KNOP1-204ENST00000567367 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
KNOP1-204ENST00000567367 ADAMTS12P58397 1594 aa21.9■■□□□ 1.1
KNOP1-204ENST00000567367 BIVM-ERCC5R4GMW8 1640 aa21.89■■□□□ 1.09
KNOP1-204ENST00000567367 CEP170Q5SW79 1584 aa21.86■■□□□ 1.09
KNOP1-204ENST00000567367 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
KNOP1-204ENST00000567367 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
KNOP1-204ENST00000567367 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
KNOP1-204ENST00000567367 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
KNOP1-204ENST00000567367 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
KNOP1-204ENST00000567367 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
KNOP1-204ENST00000567367 NPM1P06748 294 aaKnown RBP eCLIP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms