RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 NISCHQ9Y2I1 1504 aa28.72■■■□□ 2.19
SPG7-216ENST00000567138 ABCC9O60706 1549 aa26.23■■□□□ 1.79
SPG7-216ENST00000567138 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
SPG7-216ENST00000567138 RB1CC1Q8TDY2 1594 aa24.82■■□□□ 1.56
SPG7-216ENST00000567138 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
SPG7-216ENST00000567138 NACADO15069 1562 aa24.55■■□□□ 1.52
SPG7-216ENST00000567138 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
SPG7-216ENST00000567138 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
SPG7-216ENST00000567138 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
SPG7-216ENST00000567138 BICRAQ9NZM4 1560 aa24.14■■□□□ 1.46
SPG7-216ENST00000567138 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
SPG7-216ENST00000567138 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
SPG7-216ENST00000567138 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
SPG7-216ENST00000567138 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
SPG7-216ENST00000567138 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
SPG7-216ENST00000567138 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
SPG7-216ENST00000567138 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
SPG7-216ENST00000567138 EIF4G1Q04637 1599 aaKnown RBP23.56■■□□□ 1.36
SPG7-216ENST00000567138 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
SPG7-216ENST00000567138 CUX2O14529 1486 aa22.68■■□□□ 1.22
SPG7-216ENST00000567138 ERCC6Q03468 1493 aa22.64■■□□□ 1.22
SPG7-216ENST00000567138 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
SPG7-216ENST00000567138 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
SPG7-216ENST00000567138 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
SPG7-216ENST00000567138 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
SPG7-216ENST00000567138 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
SPG7-216ENST00000567138 NESP48681 1621 aa22.46■■□□□ 1.19
SPG7-216ENST00000567138 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
SPG7-216ENST00000567138 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.17
SPG7-216ENST00000567138 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
SPG7-216ENST00000567138 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
SPG7-216ENST00000567138 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
SPG7-216ENST00000567138 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
SPG7-216ENST00000567138 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
SPG7-216ENST00000567138 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
SPG7-216ENST00000567138 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
SPG7-216ENST00000567138 WIZO95785 1651 aa21.94■■□□□ 1.1
SPG7-216ENST00000567138 MRC2Q9UBG0 1479 aa21.93■■□□□ 1.1
SPG7-216ENST00000567138 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
SPG7-216ENST00000567138 WDR62O43379 1518 aa21.9■■□□□ 1.1
SPG7-216ENST00000567138 TRIM41Q8WV44 630 aa21.87■■□□□ 1.09
SPG7-216ENST00000567138 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
SPG7-216ENST00000567138 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
SPG7-216ENST00000567138 CFTRP13569 1480 aa21.63■■□□□ 1.05
SPG7-216ENST00000567138 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
SPG7-216ENST00000567138 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
SPG7-216ENST00000567138 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.05
SPG7-216ENST00000567138 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
SPG7-216ENST00000567138 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
SPG7-216ENST00000567138 RIMBP3CA6NJZ7 1639 aa21.43■■□□□ 1.02
SPG7-216ENST00000567138 RIMBP3BA6NNM3 1639 aa21.43■■□□□ 1.02
SPG7-216ENST00000567138 RIMBP3Q9UFD9 1639 aa21.43■■□□□ 1.02
SPG7-216ENST00000567138 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
SPG7-216ENST00000567138 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
SPG7-216ENST00000567138 IFT140Q96RY7 1462 aa21.33■■□□□ 1
SPG7-216ENST00000567138 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
SPG7-216ENST00000567138 TOPBP1Q92547 1522 aa21.3■■□□□ 1
SPG7-216ENST00000567138 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
SPG7-216ENST00000567138 ARHGEF11O15085 1522 aa21.29■■□□□ 1
SPG7-216ENST00000567138 CHD1O14646 1710 aa21.25■□□□□ 0.99
SPG7-216ENST00000567138 DNMBPQ6XZF7 1577 aa21.21■□□□□ 0.99
SPG7-216ENST00000567138 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
SPG7-216ENST00000567138 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
SPG7-216ENST00000567138 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.977e-7■■■■□ 26.1
SPG7-216ENST00000567138 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
SPG7-216ENST00000567138 ARAP1Q96P48 1450 aa21.06■□□□□ 0.96
SPG7-216ENST00000567138 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
SPG7-216ENST00000567138 FBLN2P98095 1184 aa21■□□□□ 0.95
SPG7-216ENST00000567138 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
SPG7-216ENST00000567138 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
SPG7-216ENST00000567138 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
SPG7-216ENST00000567138 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
SPG7-216ENST00000567138 SOGA1O94964 1423 aa20.91■□□□□ 0.94
SPG7-216ENST00000567138 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
SPG7-216ENST00000567138 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
SPG7-216ENST00000567138 WDR97A6NE52 1622 aa20.9■□□□□ 0.94
SPG7-216ENST00000567138 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
SPG7-216ENST00000567138 CUX1P39880 1505 aa20.84■□□□□ 0.93
SPG7-216ENST00000567138 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
SPG7-216ENST00000567138 MAGI1Q96QZ7 1491 aaPredicted RBP20.82■□□□□ 0.92
SPG7-216ENST00000567138 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
SPG7-216ENST00000567138 CHMP7Q8WUX9 453 aaPredicted RBP20.76■□□□□ 0.91
SPG7-216ENST00000567138 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
SPG7-216ENST00000567138 GAPVD1Q14C86 1478 aa20.68■□□□□ 0.9
SPG7-216ENST00000567138 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
SPG7-216ENST00000567138 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
SPG7-216ENST00000567138 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
SPG7-216ENST00000567138 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
SPG7-216ENST00000567138 GRIN2AQ12879 1464 aa20.54■□□□□ 0.88
SPG7-216ENST00000567138 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
SPG7-216ENST00000567138 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
SPG7-216ENST00000567138 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
SPG7-216ENST00000567138 NUP160Q12769 1436 aa20.46■□□□□ 0.87
SPG7-216ENST00000567138 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
SPG7-216ENST00000567138 KIF13AQ9H1H9 1805 aa20.43■□□□□ 0.86
SPG7-216ENST00000567138 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
SPG7-216ENST00000567138 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
SPG7-216ENST00000567138 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
SPG7-216ENST00000567138 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
SPG7-216ENST00000567138 PRG4Q92954 1404 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms