RNA–Protein interactions for RNA: ENST00000567031.1

ITGAM-205, Transcript of integrin subunit alpha M, humanhuman

TSL 1 (best)

Gene ITGAM, Length 494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-205ENST00000567031 NISCHQ9Y2I1 1504 aa34.07■■■■□ 3.04
ITGAM-205ENST00000567031 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
ITGAM-205ENST00000567031 ABCC9O60706 1549 aa28.68■■■□□ 2.18
ITGAM-205ENST00000567031 ZCCHC6Q5VYS8 1495 aaKnown RBP28.57■■■□□ 2.16
ITGAM-205ENST00000567031 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
ITGAM-205ENST00000567031 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
ITGAM-205ENST00000567031 NACADO15069 1562 aa28.06■■■□□ 2.08
ITGAM-205ENST00000567031 DCAF8L2P0C7V8 631 aa27.96■■■□□ 2.07
ITGAM-205ENST00000567031 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
ITGAM-205ENST00000567031 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
ITGAM-205ENST00000567031 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
ITGAM-205ENST00000567031 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
ITGAM-205ENST00000567031 BICRAQ9NZM4 1560 aa27.13■■□□□ 1.93
ITGAM-205ENST00000567031 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
ITGAM-205ENST00000567031 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
ITGAM-205ENST00000567031 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
ITGAM-205ENST00000567031 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
ITGAM-205ENST00000567031 EIF4G1Q04637 1599 aaKnown RBP26.32■■□□□ 1.8
ITGAM-205ENST00000567031 MROH2BQ7Z745 1585 aa26.28■■□□□ 1.8
ITGAM-205ENST00000567031 RSF1Q96T23 1441 aaPredicted RBP26.17■■□□□ 1.78
ITGAM-205ENST00000567031 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
ITGAM-205ENST00000567031 WIZO95785 1651 aa26.07■■□□□ 1.76
ITGAM-205ENST00000567031 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
ITGAM-205ENST00000567031 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
ITGAM-205ENST00000567031 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
ITGAM-205ENST00000567031 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
ITGAM-205ENST00000567031 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
ITGAM-205ENST00000567031 NCAPD3P42695 1498 aa25.84■■□□□ 1.73
ITGAM-205ENST00000567031 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
ITGAM-205ENST00000567031 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
ITGAM-205ENST00000567031 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
ITGAM-205ENST00000567031 CCDC88BA6NC98 1476 aa25.45■■□□□ 1.66
ITGAM-205ENST00000567031 PRDM2Q13029 1718 aa25.19■■□□□ 1.62
ITGAM-205ENST00000567031 CFTRP13569 1480 aa25.13■■□□□ 1.61
ITGAM-205ENST00000567031 LAMC3Q9Y6N6 1575 aa25.11■■□□□ 1.61
ITGAM-205ENST00000567031 CADPSQ9ULU8 1353 aa25.08■■□□□ 1.61
ITGAM-205ENST00000567031 NESP48681 1621 aa25.04■■□□□ 1.6
ITGAM-205ENST00000567031 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
ITGAM-205ENST00000567031 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
ITGAM-205ENST00000567031 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
ITGAM-205ENST00000567031 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
ITGAM-205ENST00000567031 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
ITGAM-205ENST00000567031 BIVM-ERCC5R4GMW8 1640 aa24.65■■□□□ 1.54
ITGAM-205ENST00000567031 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
ITGAM-205ENST00000567031 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
ITGAM-205ENST00000567031 CUX1P39880 1505 aa24.63■■□□□ 1.53
ITGAM-205ENST00000567031 ERCC6Q03468 1493 aa24.63■■□□□ 1.53
ITGAM-205ENST00000567031 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
ITGAM-205ENST00000567031 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
ITGAM-205ENST00000567031 DNMBPQ6XZF7 1577 aa24.61■■□□□ 1.53
ITGAM-205ENST00000567031 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
ITGAM-205ENST00000567031 URB2Q14146 1524 aaKnown RBP24.59■■□□□ 1.53
ITGAM-205ENST00000567031 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
ITGAM-205ENST00000567031 TOPBP1Q92547 1522 aa24.55■■□□□ 1.52
ITGAM-205ENST00000567031 WDR62O43379 1518 aa24.54■■□□□ 1.52
ITGAM-205ENST00000567031 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
ITGAM-205ENST00000567031 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
ITGAM-205ENST00000567031 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
ITGAM-205ENST00000567031 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
ITGAM-205ENST00000567031 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
ITGAM-205ENST00000567031 CUX2O14529 1486 aa24.28■■□□□ 1.48
ITGAM-205ENST00000567031 RAD54L2Q9Y4B4 1467 aa24.23■■□□□ 1.47
ITGAM-205ENST00000567031 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
ITGAM-205ENST00000567031 SOGA1O94964 1423 aa24.21■■□□□ 1.47
ITGAM-205ENST00000567031 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
ITGAM-205ENST00000567031 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
ITGAM-205ENST00000567031 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
ITGAM-205ENST00000567031 EEA1Q15075 1411 aa24.06■■□□□ 1.44
ITGAM-205ENST00000567031 EIF4G3O43432 1585 aaKnown RBP24.06■■□□□ 1.44
ITGAM-205ENST00000567031 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
ITGAM-205ENST00000567031 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
ITGAM-205ENST00000567031 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
ITGAM-205ENST00000567031 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
ITGAM-205ENST00000567031 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
ITGAM-205ENST00000567031 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
ITGAM-205ENST00000567031 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.42
ITGAM-205ENST00000567031 CUL7Q14999 1698 aa23.91■■□□□ 1.42
ITGAM-205ENST00000567031 GRIN2BQ13224 1484 aa23.89■■□□□ 1.42
ITGAM-205ENST00000567031 FAM9AQ8IZU1 332 aaPredicted RBP23.87■■□□□ 1.41
ITGAM-205ENST00000567031 IGF1RP08069 1367 aa23.87■■□□□ 1.41
ITGAM-205ENST00000567031 KIF21BO75037 1637 aa23.86■■□□□ 1.41
ITGAM-205ENST00000567031 ADAMTS12P58397 1594 aa23.85■■□□□ 1.41
ITGAM-205ENST00000567031 CSRNP3Q8WYN3 585 aa23.83■■□□□ 1.41
ITGAM-205ENST00000567031 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
ITGAM-205ENST00000567031 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
ITGAM-205ENST00000567031 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
ITGAM-205ENST00000567031 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
ITGAM-205ENST00000567031 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
ITGAM-205ENST00000567031 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
ITGAM-205ENST00000567031 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
ITGAM-205ENST00000567031 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
ITGAM-205ENST00000567031 CHD1O14646 1710 aa23.67■■□□□ 1.38
ITGAM-205ENST00000567031 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
ITGAM-205ENST00000567031 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
ITGAM-205ENST00000567031 LOC105371045A0A1W2PR82 267 aa23.53■■□□□ 1.36
ITGAM-205ENST00000567031 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
ITGAM-205ENST00000567031 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
ITGAM-205ENST00000567031 NUP160Q12769 1436 aa23.49■■□□□ 1.35
ITGAM-205ENST00000567031 TNIKQ9UKE5 1360 aa23.48■■□□□ 1.35
ITGAM-205ENST00000567031 CHMP7Q8WUX9 453 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms