RNA–Protein interactions for RNA: ENST00000566540.5

PMM2-211, Transcript of phosphomannomutase 2, humanhuman

TSL 1 (best)

Gene PMM2, Length 1,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-211ENST00000566540 NISCHQ9Y2I1 1504 aa35.56■■■■□ 3.28
PMM2-211ENST00000566540 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
PMM2-211ENST00000566540 ABCC9O60706 1549 aa29.89■■■□□ 2.38
PMM2-211ENST00000566540 ZCCHC6Q5VYS8 1495 aaKnown RBP29.79■■■□□ 2.36
PMM2-211ENST00000566540 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
PMM2-211ENST00000566540 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
PMM2-211ENST00000566540 MYO15BQ96JP2 1530 aa29.27■■■□□ 2.28
PMM2-211ENST00000566540 NACADO15069 1562 aa29.19■■■□□ 2.26
PMM2-211ENST00000566540 RB1CC1Q8TDY2 1594 aa29.04■■■□□ 2.24
PMM2-211ENST00000566540 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
PMM2-211ENST00000566540 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
PMM2-211ENST00000566540 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
PMM2-211ENST00000566540 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
PMM2-211ENST00000566540 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.09
PMM2-211ENST00000566540 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
PMM2-211ENST00000566540 BAZ1AQ9NRL2 1556 aaPredicted RBP27.48■■□□□ 1.99
PMM2-211ENST00000566540 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
PMM2-211ENST00000566540 SMARCA4P51532 1647 aa27.43■■□□□ 1.98
PMM2-211ENST00000566540 RSF1Q96T23 1441 aaPredicted RBP27.4■■□□□ 1.98
PMM2-211ENST00000566540 EIF4G1Q04637 1599 aaKnown RBP27.37■■□□□ 1.97
PMM2-211ENST00000566540 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
PMM2-211ENST00000566540 WIZO95785 1651 aa27.19■■□□□ 1.94
PMM2-211ENST00000566540 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
PMM2-211ENST00000566540 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
PMM2-211ENST00000566540 CC2D2AQ9P2K1 1620 aa27.07■■□□□ 1.92
PMM2-211ENST00000566540 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
PMM2-211ENST00000566540 NCAPD3P42695 1498 aa26.95■■□□□ 1.91
PMM2-211ENST00000566540 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
PMM2-211ENST00000566540 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
PMM2-211ENST00000566540 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
PMM2-211ENST00000566540 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
PMM2-211ENST00000566540 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
PMM2-211ENST00000566540 CFTRP13569 1480 aa26.22■■□□□ 1.79
PMM2-211ENST00000566540 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.78
PMM2-211ENST00000566540 NESP48681 1621 aa26.13■■□□□ 1.77
PMM2-211ENST00000566540 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
PMM2-211ENST00000566540 PRDM2Q13029 1718 aa26.06■■□□□ 1.76
PMM2-211ENST00000566540 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
PMM2-211ENST00000566540 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
PMM2-211ENST00000566540 ABCC8Q09428 1581 aa25.89■■□□□ 1.74
PMM2-211ENST00000566540 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
PMM2-211ENST00000566540 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
PMM2-211ENST00000566540 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
PMM2-211ENST00000566540 WRNQ14191 1432 aaPredicted RBP eCLIP25.78■■□□□ 1.72
PMM2-211ENST00000566540 SYNJ1O43426 1573 aa25.72■■□□□ 1.71
PMM2-211ENST00000566540 CUX1P39880 1505 aa25.7■■□□□ 1.7
PMM2-211ENST00000566540 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
PMM2-211ENST00000566540 TOP2BQ02880 1626 aa25.65■■□□□ 1.7
PMM2-211ENST00000566540 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
PMM2-211ENST00000566540 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
PMM2-211ENST00000566540 URB2Q14146 1524 aaKnown RBP25.64■■□□□ 1.69
PMM2-211ENST00000566540 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
PMM2-211ENST00000566540 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
PMM2-211ENST00000566540 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
PMM2-211ENST00000566540 THOC2Q8NI27 1593 aaKnown RBP25.54■■□□□ 1.68
PMM2-211ENST00000566540 WDR62O43379 1518 aa25.5■■□□□ 1.67
PMM2-211ENST00000566540 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
PMM2-211ENST00000566540 POLA1P09884 1462 aaPredicted RBP25.43■■□□□ 1.66
PMM2-211ENST00000566540 RAD54L2Q9Y4B4 1467 aa25.33■■□□□ 1.65
PMM2-211ENST00000566540 CUX2O14529 1486 aa25.32■■□□□ 1.64
PMM2-211ENST00000566540 SOGA1O94964 1423 aa25.31■■□□□ 1.64
PMM2-211ENST00000566540 TARBP1Q13395 1621 aaKnown RBP25.27■■□□□ 1.64
PMM2-211ENST00000566540 RUSC2Q8N2Y8 1516 aa25.27■■□□□ 1.64
PMM2-211ENST00000566540 ABCA10Q8WWZ4 1543 aa25.25■■□□□ 1.63
PMM2-211ENST00000566540 WDR97A6NE52 1622 aa25.25■■□□□ 1.63
PMM2-211ENST00000566540 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
PMM2-211ENST00000566540 FAM9AQ8IZU1 332 aaPredicted RBP25.17■■□□□ 1.62
PMM2-211ENST00000566540 EEA1Q15075 1411 aa25.16■■□□□ 1.62
PMM2-211ENST00000566540 KIF27Q86VH2 1401 aa25.16■■□□□ 1.62
PMM2-211ENST00000566540 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
PMM2-211ENST00000566540 ABCA5Q8WWZ7 1642 aa25.1■■□□□ 1.61
PMM2-211ENST00000566540 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
PMM2-211ENST00000566540 CSRNP3Q8WYN3 585 aa25.05■■□□□ 1.6
PMM2-211ENST00000566540 AQRO60306 1485 aaKnown RBP eCLIP25.04■■□□□ 1.61e-7■■■■□ 20.2
PMM2-211ENST00000566540 GAPVD1Q14C86 1478 aa25.03■■□□□ 1.6
PMM2-211ENST00000566540 IGF1RP08069 1367 aa25.01■■□□□ 1.59
PMM2-211ENST00000566540 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
PMM2-211ENST00000566540 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
PMM2-211ENST00000566540 ERICH3Q5RHP9 1530 aa24.94■■□□□ 1.58
PMM2-211ENST00000566540 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
PMM2-211ENST00000566540 PRXQ9BXM0 1461 aa24.91■■□□□ 1.58
PMM2-211ENST00000566540 KIF21BO75037 1637 aa24.89■■□□□ 1.57
PMM2-211ENST00000566540 LOC105371045A0A1W2PR82 267 aa24.86■■□□□ 1.57
PMM2-211ENST00000566540 CUL7Q14999 1698 aa24.85■■□□□ 1.57
PMM2-211ENST00000566540 CARMIL1Q5VZK9 1371 aa24.85■■□□□ 1.57
PMM2-211ENST00000566540 RAPGEF2Q9Y4G8 1499 aa24.82■■□□□ 1.56
PMM2-211ENST00000566540 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
PMM2-211ENST00000566540 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
PMM2-211ENST00000566540 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
PMM2-211ENST00000566540 GOLGA3Q08378 1498 aa24.79■■□□□ 1.56
PMM2-211ENST00000566540 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
PMM2-211ENST00000566540 FHAD1B1AJZ9 1412 aa24.76■■□□□ 1.55
PMM2-211ENST00000566540 SYNJ2O15056 1496 aa24.67■■□□□ 1.54
PMM2-211ENST00000566540 TNIKQ9UKE5 1360 aa24.63■■□□□ 1.53
PMM2-211ENST00000566540 UBTFP17480 764 aaKnown RBP24.63■■□□□ 1.53
PMM2-211ENST00000566540 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
PMM2-211ENST00000566540 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.52
PMM2-211ENST00000566540 CHD1O14646 1710 aa24.54■■□□□ 1.52
PMM2-211ENST00000566540 FBLN2P98095 1184 aa24.53■■□□□ 1.52
PMM2-211ENST00000566540 CTTNBP2Q8WZ74 1663 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms