RNA–Protein interactions for RNA: ENST00000566368.1

E2F4-207, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-207ENST00000566368 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
E2F4-207ENST00000566368 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.79
E2F4-207ENST00000566368 ABCC9O60706 1549 aa30.98■■■□□ 2.55
E2F4-207ENST00000566368 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
E2F4-207ENST00000566368 DCAF1Q9Y4B6 1507 aa30.53■■■□□ 2.48
E2F4-207ENST00000566368 DCAF8L2P0C7V8 631 aa30.42■■■□□ 2.46
E2F4-207ENST00000566368 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
E2F4-207ENST00000566368 NACADO15069 1562 aa30.34■■■□□ 2.45
E2F4-207ENST00000566368 RB1CC1Q8TDY2 1594 aa30.22■■■□□ 2.43
E2F4-207ENST00000566368 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
E2F4-207ENST00000566368 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.32
E2F4-207ENST00000566368 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
E2F4-207ENST00000566368 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
E2F4-207ENST00000566368 PABPN1Q86U42 306 aaKnown RBP eCLIP29.01■■■□□ 2.23
E2F4-207ENST00000566368 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
E2F4-207ENST00000566368 CECR2Q9BXF3 1484 aa28.53■■■□□ 2.16
E2F4-207ENST00000566368 SMARCA4P51532 1647 aa28.44■■■□□ 2.14
E2F4-207ENST00000566368 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.14
E2F4-207ENST00000566368 MROH2BQ7Z745 1585 aa28.35■■■□□ 2.13
E2F4-207ENST00000566368 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
E2F4-207ENST00000566368 PEG3Q9GZU2 1588 aa28.15■■■□□ 2.1
E2F4-207ENST00000566368 SMARCA2P51531 1590 aa28.14■■■□□ 2.1
E2F4-207ENST00000566368 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
E2F4-207ENST00000566368 WIZO95785 1651 aa28.12■■■□□ 2.09
E2F4-207ENST00000566368 CC2D2AQ9P2K1 1620 aa28.09■■■□□ 2.09
E2F4-207ENST00000566368 ATAD2BQ9ULI0 1458 aa28.05■■■□□ 2.08
E2F4-207ENST00000566368 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
E2F4-207ENST00000566368 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
E2F4-207ENST00000566368 BAZ1BQ9UIG0 1483 aaKnown RBP27.92■■■□□ 2.06
E2F4-207ENST00000566368 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
E2F4-207ENST00000566368 DNAJC5BQ9UF47 199 aa27.61■■■□□ 2.01
E2F4-207ENST00000566368 CCDC88BA6NC98 1476 aa27.51■■□□□ 1.99
E2F4-207ENST00000566368 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
E2F4-207ENST00000566368 CFTRP13569 1480 aa27.16■■□□□ 1.94
E2F4-207ENST00000566368 LAMC3Q9Y6N6 1575 aa27.15■■□□□ 1.94
E2F4-207ENST00000566368 PRDM2Q13029 1718 aa27.15■■□□□ 1.94
E2F4-207ENST00000566368 NESP48681 1621 aa26.99■■□□□ 1.91
E2F4-207ENST00000566368 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
E2F4-207ENST00000566368 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
E2F4-207ENST00000566368 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
E2F4-207ENST00000566368 KIF21AQ7Z4S6 1674 aa26.79■■□□□ 1.88
E2F4-207ENST00000566368 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
E2F4-207ENST00000566368 ERCC6Q03468 1493 aa26.73■■□□□ 1.87
E2F4-207ENST00000566368 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
E2F4-207ENST00000566368 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
E2F4-207ENST00000566368 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
E2F4-207ENST00000566368 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
E2F4-207ENST00000566368 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
E2F4-207ENST00000566368 MRC2Q9UBG0 1479 aa26.59■■□□□ 1.85
E2F4-207ENST00000566368 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
E2F4-207ENST00000566368 CUX1P39880 1505 aa26.57■■□□□ 1.84
E2F4-207ENST00000566368 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
E2F4-207ENST00000566368 URB2Q14146 1524 aaKnown RBP26.52■■□□□ 1.84
E2F4-207ENST00000566368 TOPBP1Q92547 1522 aa26.52■■□□□ 1.84
E2F4-207ENST00000566368 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
E2F4-207ENST00000566368 WDR62O43379 1518 aa26.47■■□□□ 1.83
E2F4-207ENST00000566368 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
E2F4-207ENST00000566368 POLA1P09884 1462 aaPredicted RBP26.34■■□□□ 1.81
E2F4-207ENST00000566368 SOGA1O94964 1423 aa26.23■■□□□ 1.79
E2F4-207ENST00000566368 IFT140Q96RY7 1462 aa26.19■■□□□ 1.78
E2F4-207ENST00000566368 ABCA10Q8WWZ4 1543 aa26.18■■□□□ 1.78
E2F4-207ENST00000566368 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
E2F4-207ENST00000566368 TARBP1Q13395 1621 aaKnown RBP26.17■■□□□ 1.78
E2F4-207ENST00000566368 CUX2O14529 1486 aa26.17■■□□□ 1.78
E2F4-207ENST00000566368 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
E2F4-207ENST00000566368 EEA1Q15075 1411 aa26.15■■□□□ 1.78
E2F4-207ENST00000566368 KIF27Q86VH2 1401 aa26.12■■□□□ 1.77
E2F4-207ENST00000566368 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
E2F4-207ENST00000566368 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
E2F4-207ENST00000566368 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
E2F4-207ENST00000566368 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
E2F4-207ENST00000566368 EIF4G3O43432 1585 aaKnown RBP25.96■■□□□ 1.75
E2F4-207ENST00000566368 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
E2F4-207ENST00000566368 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
E2F4-207ENST00000566368 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
E2F4-207ENST00000566368 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
E2F4-207ENST00000566368 CSRNP3Q8WYN3 585 aa25.9■■□□□ 1.74
E2F4-207ENST00000566368 AQRO60306 1485 aaKnown RBP eCLIP25.89■■□□□ 1.735e-7■■■□□ 15.2
E2F4-207ENST00000566368 GRIN2BQ13224 1484 aa25.88■■□□□ 1.73
E2F4-207ENST00000566368 CUL7Q14999 1698 aa25.87■■□□□ 1.73
E2F4-207ENST00000566368 IGF1RP08069 1367 aa25.82■■□□□ 1.72
E2F4-207ENST00000566368 KIF21BO75037 1637 aa25.81■■□□□ 1.72
E2F4-207ENST00000566368 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
E2F4-207ENST00000566368 PRXQ9BXM0 1461 aa25.75■■□□□ 1.71
E2F4-207ENST00000566368 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
E2F4-207ENST00000566368 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
E2F4-207ENST00000566368 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
E2F4-207ENST00000566368 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
E2F4-207ENST00000566368 RAPGEF2Q9Y4G8 1499 aa25.7■■□□□ 1.7
E2F4-207ENST00000566368 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.7
E2F4-207ENST00000566368 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
E2F4-207ENST00000566368 GRIN2AQ12879 1464 aa25.54■■□□□ 1.68
E2F4-207ENST00000566368 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
E2F4-207ENST00000566368 UBTFP17480 764 aaKnown RBP25.53■■□□□ 1.68
E2F4-207ENST00000566368 CHMP7Q8WUX9 453 aaPredicted RBP25.53■■□□□ 1.68
E2F4-207ENST00000566368 LOC105371045A0A1W2PR82 267 aa25.52■■□□□ 1.68
E2F4-207ENST00000566368 CHD1O14646 1710 aa25.5■■□□□ 1.67
E2F4-207ENST00000566368 CTTNBP2Q8WZ74 1663 aa25.49■■□□□ 1.67
E2F4-207ENST00000566368 FBLN2P98095 1184 aa25.48■■□□□ 1.67
E2F4-207ENST00000566368 TNIKQ9UKE5 1360 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms