RNA–Protein interactions for RNA: ENST00000566147.1

ARID3B-203, Transcript of AT-rich interaction domain 3B, humanhuman

TSL 3

Gene ARID3B, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3B-203ENST00000566147 NISCHQ9Y2I1 1504 aa18.51■□□□□ 0.55
ARID3B-203ENST00000566147 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
ARID3B-203ENST00000566147 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
ARID3B-203ENST00000566147 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
ARID3B-203ENST00000566147 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
ARID3B-203ENST00000566147 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
ARID3B-203ENST00000566147 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
ARID3B-203ENST00000566147 ABCC9O60706 1549 aa15□□□□□ -0.01
ARID3B-203ENST00000566147 CHIC1Q5VXU3 224 aa14.98□□□□□ -0.01
ARID3B-203ENST00000566147 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
ARID3B-203ENST00000566147 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
ARID3B-203ENST00000566147 NACADO15069 1562 aa14.85□□□□□ -0.03
ARID3B-203ENST00000566147 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
ARID3B-203ENST00000566147 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
ARID3B-203ENST00000566147 RSF1Q96T23 1441 aaPredicted RBP14.46□□□□□ -0.09
ARID3B-203ENST00000566147 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
ARID3B-203ENST00000566147 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
ARID3B-203ENST00000566147 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
ARID3B-203ENST00000566147 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
ARID3B-203ENST00000566147 WIZO95785 1651 aa14.26□□□□□ -0.13
ARID3B-203ENST00000566147 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
ARID3B-203ENST00000566147 SMARCA4P51532 1647 aa14.21□□□□□ -0.13
ARID3B-203ENST00000566147 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
ARID3B-203ENST00000566147 TOP2AP11388 1531 aaKnown RBP14.1□□□□□ -0.15
ARID3B-203ENST00000566147 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
ARID3B-203ENST00000566147 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
ARID3B-203ENST00000566147 PEG3Q9GZU2 1588 aa13.97□□□□□ -0.17
ARID3B-203ENST00000566147 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
ARID3B-203ENST00000566147 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
ARID3B-203ENST00000566147 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
ARID3B-203ENST00000566147 BAZ1BQ9UIG0 1483 aaKnown RBP13.83□□□□□ -0.2
ARID3B-203ENST00000566147 LOC105371045A0A1W2PR82 267 aa13.79□□□□□ -0.2
ARID3B-203ENST00000566147 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
ARID3B-203ENST00000566147 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
ARID3B-203ENST00000566147 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
ARID3B-203ENST00000566147 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
ARID3B-203ENST00000566147 NCAPD3P42695 1498 aa13.68□□□□□ -0.22
ARID3B-203ENST00000566147 SYNJ1O43426 1573 aa13.59□□□□□ -0.23
ARID3B-203ENST00000566147 WRNQ14191 1432 aaPredicted RBP eCLIP13.59□□□□□ -0.237e-7■■■■■ 52.5
ARID3B-203ENST00000566147 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
ARID3B-203ENST00000566147 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
ARID3B-203ENST00000566147 SOGA1O94964 1423 aa13.54□□□□□ -0.24
ARID3B-203ENST00000566147 PHF23Q9BUL5 403 aaPredicted RBP13.5□□□□□ -0.25
ARID3B-203ENST00000566147 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
ARID3B-203ENST00000566147 EEA1Q15075 1411 aa13.48□□□□□ -0.25
ARID3B-203ENST00000566147 TOP2BQ02880 1626 aa13.47□□□□□ -0.25
ARID3B-203ENST00000566147 BIVM-ERCC5R4GMW8 1640 aa13.47□□□□□ -0.25
ARID3B-203ENST00000566147 CFTRP13569 1480 aa13.47□□□□□ -0.25
ARID3B-203ENST00000566147 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
ARID3B-203ENST00000566147 CUX1P39880 1505 aa13.41□□□□□ -0.26
ARID3B-203ENST00000566147 PCGF6Q9BYE7 350 aa13.39□□□□□ -0.27
ARID3B-203ENST00000566147 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
ARID3B-203ENST00000566147 GOLGA3Q08378 1498 aa13.36□□□□□ -0.27
ARID3B-203ENST00000566147 KIF21BO75037 1637 aa13.36□□□□□ -0.27
ARID3B-203ENST00000566147 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
ARID3B-203ENST00000566147 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.27
ARID3B-203ENST00000566147 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
ARID3B-203ENST00000566147 CEP164Q9UPV0 1460 aa13.32□□□□□ -0.28
ARID3B-203ENST00000566147 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
ARID3B-203ENST00000566147 NESP48681 1621 aa13.26□□□□□ -0.29
ARID3B-203ENST00000566147 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
ARID3B-203ENST00000566147 UBTFP17480 764 aaKnown RBP13.25□□□□□ -0.29
ARID3B-203ENST00000566147 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
ARID3B-203ENST00000566147 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
ARID3B-203ENST00000566147 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
ARID3B-203ENST00000566147 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
ARID3B-203ENST00000566147 ERICH3Q5RHP9 1530 aa13.2□□□□□ -0.3
ARID3B-203ENST00000566147 HRCP23327 699 aa13.2□□□□□ -0.3
ARID3B-203ENST00000566147 PRXQ9BXM0 1461 aa13.2□□□□□ -0.3
ARID3B-203ENST00000566147 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
ARID3B-203ENST00000566147 PPARGC1BQ86YN6 1023 aaKnown RBP13.17□□□□□ -0.3
ARID3B-203ENST00000566147 CUX2O14529 1486 aa13.16□□□□□ -0.3
ARID3B-203ENST00000566147 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
ARID3B-203ENST00000566147 CLIP1P30622 1438 aa13.15□□□□□ -0.3
ARID3B-203ENST00000566147 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
ARID3B-203ENST00000566147 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
ARID3B-203ENST00000566147 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
ARID3B-203ENST00000566147 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
ARID3B-203ENST00000566147 RAD54L2Q9Y4B4 1467 aa13.09□□□□□ -0.31
ARID3B-203ENST00000566147 IGF1RP08069 1367 aa13.07□□□□□ -0.32
ARID3B-203ENST00000566147 PDS5BQ9NTI5 1447 aa13.07□□□□□ -0.32
ARID3B-203ENST00000566147 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
ARID3B-203ENST00000566147 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
ARID3B-203ENST00000566147 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
ARID3B-203ENST00000566147 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
ARID3B-203ENST00000566147 RANGAP1P46060 587 aaPredicted RBP13.04□□□□□ -0.32
ARID3B-203ENST00000566147 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
ARID3B-203ENST00000566147 CARMIL1Q5VZK9 1371 aa13.01□□□□□ -0.33
ARID3B-203ENST00000566147 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
ARID3B-203ENST00000566147 CUL7Q14999 1698 aa12.98□□□□□ -0.33
ARID3B-203ENST00000566147 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
ARID3B-203ENST00000566147 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
ARID3B-203ENST00000566147 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
ARID3B-203ENST00000566147 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
ARID3B-203ENST00000566147 GAPVD1Q14C86 1478 aa12.9□□□□□ -0.34
ARID3B-203ENST00000566147 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
ARID3B-203ENST00000566147 APLP2Q06481 763 aa12.88□□□□□ -0.35
ARID3B-203ENST00000566147 PBRM1Q86U86 1689 aa12.87□□□□□ -0.35
ARID3B-203ENST00000566147 WDR62O43379 1518 aa12.87□□□□□ -0.35
ARID3B-203ENST00000566147 ZEB1P37275 1124 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms