RNA–Protein interactions for RNA: ENST00000566023.1

KIAA0556-205, Transcript of KIAA0556, humanhuman

TSL 3

Gene KIAA0556, Length 440 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0556-205ENST00000566023 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
KIAA0556-205ENST00000566023 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.09
KIAA0556-205ENST00000566023 ABCC9O60706 1549 aa21.55■■□□□ 1.04
KIAA0556-205ENST00000566023 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
KIAA0556-205ENST00000566023 NACADO15069 1562 aa20.72■□□□□ 0.91
KIAA0556-205ENST00000566023 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
KIAA0556-205ENST00000566023 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
KIAA0556-205ENST00000566023 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
KIAA0556-205ENST00000566023 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
KIAA0556-205ENST00000566023 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
KIAA0556-205ENST00000566023 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
KIAA0556-205ENST00000566023 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
KIAA0556-205ENST00000566023 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
KIAA0556-205ENST00000566023 UNC13AQ9UPW8 1703 aa20.06■□□□□ 0.8
KIAA0556-205ENST00000566023 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
KIAA0556-205ENST00000566023 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
KIAA0556-205ENST00000566023 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
KIAA0556-205ENST00000566023 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
KIAA0556-205ENST00000566023 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
KIAA0556-205ENST00000566023 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
KIAA0556-205ENST00000566023 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
KIAA0556-205ENST00000566023 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
KIAA0556-205ENST00000566023 SMARCA4P51532 1647 aa19.02■□□□□ 0.64
KIAA0556-205ENST00000566023 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
KIAA0556-205ENST00000566023 HMGXB3Q12766 1538 aa18.99■□□□□ 0.63
KIAA0556-205ENST00000566023 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
KIAA0556-205ENST00000566023 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
KIAA0556-205ENST00000566023 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
KIAA0556-205ENST00000566023 CUX2O14529 1486 aa18.65■□□□□ 0.58
KIAA0556-205ENST00000566023 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
KIAA0556-205ENST00000566023 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
KIAA0556-205ENST00000566023 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
KIAA0556-205ENST00000566023 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
KIAA0556-205ENST00000566023 NESP48681 1621 aa18.57■□□□□ 0.56
KIAA0556-205ENST00000566023 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
KIAA0556-205ENST00000566023 WIZO95785 1651 aa18.54■□□□□ 0.56
KIAA0556-205ENST00000566023 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
KIAA0556-205ENST00000566023 CFTRP13569 1480 aa18.42■□□□□ 0.54
KIAA0556-205ENST00000566023 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
KIAA0556-205ENST00000566023 THOC2Q8NI27 1593 aaKnown RBP18.36■□□□□ 0.53
KIAA0556-205ENST00000566023 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
KIAA0556-205ENST00000566023 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
KIAA0556-205ENST00000566023 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
KIAA0556-205ENST00000566023 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
KIAA0556-205ENST00000566023 WDR62O43379 1518 aa18.25■□□□□ 0.51
KIAA0556-205ENST00000566023 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
KIAA0556-205ENST00000566023 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
KIAA0556-205ENST00000566023 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
KIAA0556-205ENST00000566023 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
KIAA0556-205ENST00000566023 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
KIAA0556-205ENST00000566023 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
KIAA0556-205ENST00000566023 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
KIAA0556-205ENST00000566023 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
KIAA0556-205ENST00000566023 SUPT5HO00267 1087 aaKnown RBP17.81■□□□□ 0.44
KIAA0556-205ENST00000566023 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
KIAA0556-205ENST00000566023 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
KIAA0556-205ENST00000566023 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
KIAA0556-205ENST00000566023 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
KIAA0556-205ENST00000566023 SOGA1O94964 1423 aa17.73■□□□□ 0.43
KIAA0556-205ENST00000566023 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
KIAA0556-205ENST00000566023 CUX1P39880 1505 aa17.69■□□□□ 0.42
KIAA0556-205ENST00000566023 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
KIAA0556-205ENST00000566023 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
KIAA0556-205ENST00000566023 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
KIAA0556-205ENST00000566023 RAD54L2Q9Y4B4 1467 aa17.64■□□□□ 0.41
KIAA0556-205ENST00000566023 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
KIAA0556-205ENST00000566023 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
KIAA0556-205ENST00000566023 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
KIAA0556-205ENST00000566023 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
KIAA0556-205ENST00000566023 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
KIAA0556-205ENST00000566023 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
KIAA0556-205ENST00000566023 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
KIAA0556-205ENST00000566023 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
KIAA0556-205ENST00000566023 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
KIAA0556-205ENST00000566023 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
KIAA0556-205ENST00000566023 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
KIAA0556-205ENST00000566023 FBLN2P98095 1184 aa17.46■□□□□ 0.39
KIAA0556-205ENST00000566023 ARHGEF11O15085 1522 aa17.44■□□□□ 0.38
KIAA0556-205ENST00000566023 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
KIAA0556-205ENST00000566023 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
KIAA0556-205ENST00000566023 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
KIAA0556-205ENST00000566023 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
KIAA0556-205ENST00000566023 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
KIAA0556-205ENST00000566023 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
KIAA0556-205ENST00000566023 CHD1O14646 1710 aa17.39■□□□□ 0.37
KIAA0556-205ENST00000566023 CLASP1Q7Z460 1538 aa17.38■□□□□ 0.37
KIAA0556-205ENST00000566023 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
KIAA0556-205ENST00000566023 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
KIAA0556-205ENST00000566023 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
KIAA0556-205ENST00000566023 PBRM1Q86U86 1689 aa17.31■□□□□ 0.36
KIAA0556-205ENST00000566023 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
KIAA0556-205ENST00000566023 NUP160Q12769 1436 aa17.3■□□□□ 0.36
KIAA0556-205ENST00000566023 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
KIAA0556-205ENST00000566023 ADAMTS12P58397 1594 aa17.25■□□□□ 0.35
KIAA0556-205ENST00000566023 IGF1RP08069 1367 aa17.24■□□□□ 0.35
KIAA0556-205ENST00000566023 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
KIAA0556-205ENST00000566023 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
KIAA0556-205ENST00000566023 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
KIAA0556-205ENST00000566023 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
KIAA0556-205ENST00000566023 KIAA0586Q9BVV6 1533 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms