RNA–Protein interactions for RNA: ENST00000565733.5

RSRP1-212, Transcript of arginine and serine rich protein 1, humanhuman

TSL 3

Gene RSRP1, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-212ENST00000565733 NISCHQ9Y2I1 1504 aa34.51■■■■□ 3.12
RSRP1-212ENST00000565733 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
RSRP1-212ENST00000565733 ABCC9O60706 1549 aa30.28■■■□□ 2.44
RSRP1-212ENST00000565733 DCAF8L2P0C7V8 631 aa29.12■■■□□ 2.25
RSRP1-212ENST00000565733 RB1CC1Q8TDY2 1594 aa29.02■■■□□ 2.24
RSRP1-212ENST00000565733 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.22
RSRP1-212ENST00000565733 NACADO15069 1562 aa28.92■■■□□ 2.22
RSRP1-212ENST00000565733 ZCCHC6Q5VYS8 1495 aaKnown RBP28.7■■■□□ 2.18
RSRP1-212ENST00000565733 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
RSRP1-212ENST00000565733 DCAF1Q9Y4B6 1507 aa28.49■■■□□ 2.15
RSRP1-212ENST00000565733 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
RSRP1-212ENST00000565733 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.134e-9■■■□□ 17.7
RSRP1-212ENST00000565733 UNC13AQ9UPW8 1703 aa28.3■■■□□ 2.12
RSRP1-212ENST00000565733 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
RSRP1-212ENST00000565733 BICRAQ9NZM4 1560 aa28.08■■■□□ 2.09
RSRP1-212ENST00000565733 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.06
RSRP1-212ENST00000565733 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.04
RSRP1-212ENST00000565733 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
RSRP1-212ENST00000565733 CC2D2AQ9P2K1 1620 aa27.34■■□□□ 1.97
RSRP1-212ENST00000565733 CECR2Q9BXF3 1484 aa27.2■■□□□ 1.95
RSRP1-212ENST00000565733 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
RSRP1-212ENST00000565733 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
RSRP1-212ENST00000565733 ATAD2BQ9ULI0 1458 aa26.71■■□□□ 1.87
RSRP1-212ENST00000565733 NCAPD3P42695 1498 aa26.69■■□□□ 1.86
RSRP1-212ENST00000565733 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
RSRP1-212ENST00000565733 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
RSRP1-212ENST00000565733 HMGXB3Q12766 1538 aa26.53■■□□□ 1.84
RSRP1-212ENST00000565733 BAZ1BQ9UIG0 1483 aaKnown RBP26.52■■□□□ 1.84
RSRP1-212ENST00000565733 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
RSRP1-212ENST00000565733 WIZO95785 1651 aa26.33■■□□□ 1.81
RSRP1-212ENST00000565733 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
RSRP1-212ENST00000565733 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
RSRP1-212ENST00000565733 NESP48681 1621 aa26.14■■□□□ 1.77
RSRP1-212ENST00000565733 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
RSRP1-212ENST00000565733 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
RSRP1-212ENST00000565733 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.75
RSRP1-212ENST00000565733 PDS5BQ9NTI5 1447 aa25.9■■□□□ 1.74
RSRP1-212ENST00000565733 CUX2O14529 1486 aa25.82■■□□□ 1.72
RSRP1-212ENST00000565733 KIF21AQ7Z4S6 1674 aa25.79■■□□□ 1.72
RSRP1-212ENST00000565733 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
RSRP1-212ENST00000565733 CFTRP13569 1480 aa25.73■■□□□ 1.71
RSRP1-212ENST00000565733 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
RSRP1-212ENST00000565733 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
RSRP1-212ENST00000565733 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
RSRP1-212ENST00000565733 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
RSRP1-212ENST00000565733 MRC2Q9UBG0 1479 aa25.61■■□□□ 1.69
RSRP1-212ENST00000565733 WDR62O43379 1518 aa25.49■■□□□ 1.67
RSRP1-212ENST00000565733 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
RSRP1-212ENST00000565733 DNAJC5Q9H3Z4 198 aa25.43■■□□□ 1.66
RSRP1-212ENST00000565733 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
RSRP1-212ENST00000565733 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
RSRP1-212ENST00000565733 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
RSRP1-212ENST00000565733 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
RSRP1-212ENST00000565733 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
RSRP1-212ENST00000565733 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
RSRP1-212ENST00000565733 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
RSRP1-212ENST00000565733 CUX1P39880 1505 aa24.96■■□□□ 1.59
RSRP1-212ENST00000565733 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
RSRP1-212ENST00000565733 SOGA1O94964 1423 aa24.94■■□□□ 1.58
RSRP1-212ENST00000565733 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
RSRP1-212ENST00000565733 RAD54L2Q9Y4B4 1467 aa24.92■■□□□ 1.58
RSRP1-212ENST00000565733 TARBP1Q13395 1621 aaKnown RBP24.91■■□□□ 1.58
RSRP1-212ENST00000565733 AQRO60306 1485 aaKnown RBP eCLIP24.88■■□□□ 1.572e-12■■■■■ 29.3
RSRP1-212ENST00000565733 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
RSRP1-212ENST00000565733 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
RSRP1-212ENST00000565733 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
RSRP1-212ENST00000565733 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
RSRP1-212ENST00000565733 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
RSRP1-212ENST00000565733 FBLN2P98095 1184 aa24.71■■□□□ 1.55
RSRP1-212ENST00000565733 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
RSRP1-212ENST00000565733 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
RSRP1-212ENST00000565733 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
RSRP1-212ENST00000565733 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
RSRP1-212ENST00000565733 GRIN2BQ13224 1484 aa24.63■■□□□ 1.53
RSRP1-212ENST00000565733 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
RSRP1-212ENST00000565733 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
RSRP1-212ENST00000565733 SENP3Q9H4L4 574 aaPredicted RBP24.6■■□□□ 1.53
RSRP1-212ENST00000565733 CHD1O14646 1710 aa24.58■■□□□ 1.53
RSRP1-212ENST00000565733 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.53
RSRP1-212ENST00000565733 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
RSRP1-212ENST00000565733 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
RSRP1-212ENST00000565733 ABCA5Q8WWZ7 1642 aa24.54■■□□□ 1.52
RSRP1-212ENST00000565733 SYNJ2O15056 1496 aa24.47■■□□□ 1.51
RSRP1-212ENST00000565733 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
RSRP1-212ENST00000565733 RIMBP3CA6NJZ7 1639 aa24.36■■□□□ 1.49
RSRP1-212ENST00000565733 RIMBP3BA6NNM3 1639 aa24.36■■□□□ 1.49
RSRP1-212ENST00000565733 RIMBP3Q9UFD9 1639 aa24.36■■□□□ 1.49
RSRP1-212ENST00000565733 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
RSRP1-212ENST00000565733 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
RSRP1-212ENST00000565733 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
RSRP1-212ENST00000565733 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.49
RSRP1-212ENST00000565733 KIF27Q86VH2 1401 aa24.31■■□□□ 1.48
RSRP1-212ENST00000565733 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
RSRP1-212ENST00000565733 CLASP1Q7Z460 1538 aa24.29■■□□□ 1.48
RSRP1-212ENST00000565733 CYB5RLQ6IPT4 315 aa24.23■■□□□ 1.47
RSRP1-212ENST00000565733 IGF1RP08069 1367 aa24.2■■□□□ 1.46
RSRP1-212ENST00000565733 CEP170Q5SW79 1584 aa24.17■■□□□ 1.46
RSRP1-212ENST00000565733 NUP160Q12769 1436 aa24.17■■□□□ 1.46
RSRP1-212ENST00000565733 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
RSRP1-212ENST00000565733 CUL7Q14999 1698 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms