RNA–Protein interactions for RNA: ENST00000565459.1

EPB42-205, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 2

Gene EPB42, Length 679 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-205ENST00000565459 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
EPB42-205ENST00000565459 ABCC9O60706 1549 aa21.21■□□□□ 0.99
EPB42-205ENST00000565459 CCDC180Q9P1Z9 1646 aa20.85■□□□□ 0.93
EPB42-205ENST00000565459 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
EPB42-205ENST00000565459 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
EPB42-205ENST00000565459 NACADO15069 1562 aa19.83■□□□□ 0.77
EPB42-205ENST00000565459 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
EPB42-205ENST00000565459 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
EPB42-205ENST00000565459 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
EPB42-205ENST00000565459 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
EPB42-205ENST00000565459 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
EPB42-205ENST00000565459 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
EPB42-205ENST00000565459 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
EPB42-205ENST00000565459 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
EPB42-205ENST00000565459 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
EPB42-205ENST00000565459 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.63
EPB42-205ENST00000565459 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
EPB42-205ENST00000565459 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
EPB42-205ENST00000565459 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
EPB42-205ENST00000565459 CUX2O14529 1486 aa18.52■□□□□ 0.55
EPB42-205ENST00000565459 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
EPB42-205ENST00000565459 NCAPD3P42695 1498 aa18.3■□□□□ 0.52
EPB42-205ENST00000565459 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
EPB42-205ENST00000565459 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
EPB42-205ENST00000565459 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
EPB42-205ENST00000565459 NESP48681 1621 aa18.09■□□□□ 0.49
EPB42-205ENST00000565459 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
EPB42-205ENST00000565459 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
EPB42-205ENST00000565459 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
EPB42-205ENST00000565459 LAMC3Q9Y6N6 1575 aa17.96■□□□□ 0.46
EPB42-205ENST00000565459 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
EPB42-205ENST00000565459 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
EPB42-205ENST00000565459 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
EPB42-205ENST00000565459 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
EPB42-205ENST00000565459 KIF21AQ7Z4S6 1674 aa17.85■□□□□ 0.45
EPB42-205ENST00000565459 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
EPB42-205ENST00000565459 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
EPB42-205ENST00000565459 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
EPB42-205ENST00000565459 WDR62O43379 1518 aa17.68■□□□□ 0.42
EPB42-205ENST00000565459 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
EPB42-205ENST00000565459 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
EPB42-205ENST00000565459 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
EPB42-205ENST00000565459 WIZO95785 1651 aa17.46■□□□□ 0.39
EPB42-205ENST00000565459 CFTRP13569 1480 aa17.43■□□□□ 0.38
EPB42-205ENST00000565459 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
EPB42-205ENST00000565459 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
EPB42-205ENST00000565459 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
EPB42-205ENST00000565459 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
EPB42-205ENST00000565459 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
EPB42-205ENST00000565459 ARHGEF11O15085 1522 aa17.28■□□□□ 0.36
EPB42-205ENST00000565459 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
EPB42-205ENST00000565459 TOP2AP11388 1531 aaKnown RBP17.25■□□□□ 0.35
EPB42-205ENST00000565459 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.35
EPB42-205ENST00000565459 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
EPB42-205ENST00000565459 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
EPB42-205ENST00000565459 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.34
EPB42-205ENST00000565459 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
EPB42-205ENST00000565459 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
EPB42-205ENST00000565459 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
EPB42-205ENST00000565459 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
EPB42-205ENST00000565459 ARAP1Q96P48 1450 aa17.07■□□□□ 0.32
EPB42-205ENST00000565459 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
EPB42-205ENST00000565459 CHD1O14646 1710 aa17.05■□□□□ 0.32
EPB42-205ENST00000565459 FBLN2P98095 1184 aa17.04■□□□□ 0.32
EPB42-205ENST00000565459 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
EPB42-205ENST00000565459 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.32
EPB42-205ENST00000565459 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
EPB42-205ENST00000565459 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
EPB42-205ENST00000565459 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
EPB42-205ENST00000565459 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
EPB42-205ENST00000565459 SOGA1O94964 1423 aa16.87■□□□□ 0.29
EPB42-205ENST00000565459 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
EPB42-205ENST00000565459 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
EPB42-205ENST00000565459 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
EPB42-205ENST00000565459 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
EPB42-205ENST00000565459 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
EPB42-205ENST00000565459 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
EPB42-205ENST00000565459 MAGI1Q96QZ7 1491 aaPredicted RBP16.81■□□□□ 0.28
EPB42-205ENST00000565459 GRIN2BQ13224 1484 aa16.77■□□□□ 0.28
EPB42-205ENST00000565459 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
EPB42-205ENST00000565459 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
EPB42-205ENST00000565459 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
EPB42-205ENST00000565459 CUX1P39880 1505 aa16.66■□□□□ 0.26
EPB42-205ENST00000565459 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
EPB42-205ENST00000565459 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
EPB42-205ENST00000565459 ABCA5Q8WWZ7 1642 aa16.55■□□□□ 0.24
EPB42-205ENST00000565459 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
EPB42-205ENST00000565459 ERCC6L2Q5T890 1561 aa16.52■□□□□ 0.24
EPB42-205ENST00000565459 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
EPB42-205ENST00000565459 NUP160Q12769 1436 aa16.5■□□□□ 0.23
EPB42-205ENST00000565459 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
EPB42-205ENST00000565459 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
EPB42-205ENST00000565459 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
EPB42-205ENST00000565459 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
EPB42-205ENST00000565459 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
EPB42-205ENST00000565459 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
EPB42-205ENST00000565459 FAM69CQ0P6D2 419 aa16.38■□□□□ 0.21
EPB42-205ENST00000565459 PRG4Q92954 1404 aaPredicted RBP16.37■□□□□ 0.21
EPB42-205ENST00000565459 ABCC10Q5T3U5 1492 aa16.36■□□□□ 0.21
EPB42-205ENST00000565459 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms