RNA–Protein interactions for RNA: ENST00000565454.5

TGFB1I1-211, transforming growth factor beta 1 induced transcript 1, humanhuman

TSL 4

Gene TGFB1I1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1-211ENST00000565454 NISCHQ9Y2I1 1504 aa27.69■■■□□ 2.02
TGFB1I1-211ENST00000565454 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
TGFB1I1-211ENST00000565454 ABCC9O60706 1549 aa24.07■■□□□ 1.44
TGFB1I1-211ENST00000565454 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
TGFB1I1-211ENST00000565454 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
TGFB1I1-211ENST00000565454 NACADO15069 1562 aa23.09■■□□□ 1.29
TGFB1I1-211ENST00000565454 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
TGFB1I1-211ENST00000565454 MYO15BQ96JP2 1530 aa22.98■■□□□ 1.27
TGFB1I1-211ENST00000565454 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.26
TGFB1I1-211ENST00000565454 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
TGFB1I1-211ENST00000565454 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
TGFB1I1-211ENST00000565454 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
TGFB1I1-211ENST00000565454 SCRIBQ14160 1630 aa22.45■■□□□ 1.18
TGFB1I1-211ENST00000565454 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
TGFB1I1-211ENST00000565454 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
TGFB1I1-211ENST00000565454 EIF4G1Q04637 1599 aaKnown RBP21.84■■□□□ 1.09
TGFB1I1-211ENST00000565454 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
TGFB1I1-211ENST00000565454 CECR2Q9BXF3 1484 aa21.63■■□□□ 1.05
TGFB1I1-211ENST00000565454 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
TGFB1I1-211ENST00000565454 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
TGFB1I1-211ENST00000565454 ATAD2BQ9ULI0 1458 aa21.38■■□□□ 1.01
TGFB1I1-211ENST00000565454 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
TGFB1I1-211ENST00000565454 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
TGFB1I1-211ENST00000565454 SMARCA2P51531 1590 aa21.29■■□□□ 1
TGFB1I1-211ENST00000565454 PEG3Q9GZU2 1588 aa21.26■□□□□ 0.99
TGFB1I1-211ENST00000565454 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
TGFB1I1-211ENST00000565454 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
TGFB1I1-211ENST00000565454 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.98
TGFB1I1-211ENST00000565454 WIZO95785 1651 aa21.1■□□□□ 0.97
TGFB1I1-211ENST00000565454 DNAJC5Q9H3Z4 198 aa20.9■□□□□ 0.94
TGFB1I1-211ENST00000565454 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
TGFB1I1-211ENST00000565454 NESP48681 1621 aa20.86■□□□□ 0.93
TGFB1I1-211ENST00000565454 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
TGFB1I1-211ENST00000565454 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
TGFB1I1-211ENST00000565454 ERCC6Q03468 1493 aa20.69■□□□□ 0.9
TGFB1I1-211ENST00000565454 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
TGFB1I1-211ENST00000565454 CFTRP13569 1480 aa20.61■□□□□ 0.89
TGFB1I1-211ENST00000565454 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
TGFB1I1-211ENST00000565454 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
TGFB1I1-211ENST00000565454 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
TGFB1I1-211ENST00000565454 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
TGFB1I1-211ENST00000565454 CUX2O14529 1486 aa20.49■□□□□ 0.87
TGFB1I1-211ENST00000565454 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
TGFB1I1-211ENST00000565454 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
TGFB1I1-211ENST00000565454 MRC2Q9UBG0 1479 aa20.41■□□□□ 0.86
TGFB1I1-211ENST00000565454 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
TGFB1I1-211ENST00000565454 WDR62O43379 1518 aa20.34■□□□□ 0.85
TGFB1I1-211ENST00000565454 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
TGFB1I1-211ENST00000565454 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
TGFB1I1-211ENST00000565454 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
TGFB1I1-211ENST00000565454 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
TGFB1I1-211ENST00000565454 CUX1P39880 1505 aa20.04■□□□□ 0.8
TGFB1I1-211ENST00000565454 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
TGFB1I1-211ENST00000565454 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
TGFB1I1-211ENST00000565454 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
TGFB1I1-211ENST00000565454 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
TGFB1I1-211ENST00000565454 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
TGFB1I1-211ENST00000565454 RAD54L2Q9Y4B4 1467 aa19.93■□□□□ 0.78
TGFB1I1-211ENST00000565454 SOGA1O94964 1423 aa19.91■□□□□ 0.78
TGFB1I1-211ENST00000565454 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.77
TGFB1I1-211ENST00000565454 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
TGFB1I1-211ENST00000565454 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.77
TGFB1I1-211ENST00000565454 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
TGFB1I1-211ENST00000565454 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.77
TGFB1I1-211ENST00000565454 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
TGFB1I1-211ENST00000565454 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
TGFB1I1-211ENST00000565454 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
TGFB1I1-211ENST00000565454 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
TGFB1I1-211ENST00000565454 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
TGFB1I1-211ENST00000565454 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
TGFB1I1-211ENST00000565454 ABCA5Q8WWZ7 1642 aa19.66■□□□□ 0.74
TGFB1I1-211ENST00000565454 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
TGFB1I1-211ENST00000565454 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
TGFB1I1-211ENST00000565454 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
TGFB1I1-211ENST00000565454 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
TGFB1I1-211ENST00000565454 PBRM1Q86U86 1689 aa19.57■□□□□ 0.72
TGFB1I1-211ENST00000565454 FBLN2P98095 1184 aa19.56■□□□□ 0.72
TGFB1I1-211ENST00000565454 CHD1O14646 1710 aa19.55■□□□□ 0.72
TGFB1I1-211ENST00000565454 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
TGFB1I1-211ENST00000565454 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
TGFB1I1-211ENST00000565454 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
TGFB1I1-211ENST00000565454 ADAMTS12P58397 1594 aa19.47■□□□□ 0.71
TGFB1I1-211ENST00000565454 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
TGFB1I1-211ENST00000565454 IGF1RP08069 1367 aa19.44■□□□□ 0.7
TGFB1I1-211ENST00000565454 FHAD1B1AJZ9 1412 aa19.44■□□□□ 0.7
TGFB1I1-211ENST00000565454 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
TGFB1I1-211ENST00000565454 CLASP1Q7Z460 1538 aa19.4■□□□□ 0.7
TGFB1I1-211ENST00000565454 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
TGFB1I1-211ENST00000565454 NUP160Q12769 1436 aa19.35■□□□□ 0.69
TGFB1I1-211ENST00000565454 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
TGFB1I1-211ENST00000565454 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
TGFB1I1-211ENST00000565454 RIMBP3CA6NJZ7 1639 aa19.32■□□□□ 0.68
TGFB1I1-211ENST00000565454 RIMBP3BA6NNM3 1639 aa19.32■□□□□ 0.68
TGFB1I1-211ENST00000565454 RIMBP3Q9UFD9 1639 aa19.32■□□□□ 0.68
TGFB1I1-211ENST00000565454 CUL7Q14999 1698 aa19.29■□□□□ 0.68
TGFB1I1-211ENST00000565454 CARMIL1Q5VZK9 1371 aa19.29■□□□□ 0.68
TGFB1I1-211ENST00000565454 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
TGFB1I1-211ENST00000565454 ARAP1Q96P48 1450 aa19.21■□□□□ 0.67
TGFB1I1-211ENST00000565454 ERCC6L2Q5T890 1561 aa19.17■□□□□ 0.66
TGFB1I1-211ENST00000565454 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms