RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 NISCHQ9Y2I1 1504 aa38.15■■■■□ 3.7
THUMPD1-203ENST00000565248 ABCC9O60706 1549 aa34.91■■■■□ 3.18
THUMPD1-203ENST00000565248 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
THUMPD1-203ENST00000565248 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
THUMPD1-203ENST00000565248 RB1CC1Q8TDY2 1594 aa33.08■■■□□ 2.89
THUMPD1-203ENST00000565248 NACADO15069 1562 aa32.72■■■□□ 2.83
THUMPD1-203ENST00000565248 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
THUMPD1-203ENST00000565248 PABPN1Q86U42 306 aaKnown RBP eCLIP32.42■■■□□ 2.78
THUMPD1-203ENST00000565248 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.76
THUMPD1-203ENST00000565248 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
THUMPD1-203ENST00000565248 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
THUMPD1-203ENST00000565248 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
THUMPD1-203ENST00000565248 ZCCHC6Q5VYS8 1495 aaKnown RBP31.55■■■□□ 2.64
THUMPD1-203ENST00000565248 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
THUMPD1-203ENST00000565248 CECR2Q9BXF3 1484 aa31.52■■■□□ 2.64
THUMPD1-203ENST00000565248 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
THUMPD1-203ENST00000565248 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
THUMPD1-203ENST00000565248 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
THUMPD1-203ENST00000565248 DNAJC5Q9H3Z4 198 aa30.84■■■□□ 2.53
THUMPD1-203ENST00000565248 AEBP2Q6ZN18 517 aaPredicted RBP30.38■■■□□ 2.45
THUMPD1-203ENST00000565248 CUX2O14529 1486 aa30.33■■■□□ 2.45
THUMPD1-203ENST00000565248 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
THUMPD1-203ENST00000565248 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
THUMPD1-203ENST00000565248 ATAD2BQ9ULI0 1458 aa30■■■□□ 2.39
THUMPD1-203ENST00000565248 SMARCA2P51531 1590 aa29.95■■■□□ 2.39
THUMPD1-203ENST00000565248 HMGXB3Q12766 1538 aa29.92■■■□□ 2.38
THUMPD1-203ENST00000565248 SMARCA4P51532 1647 aa29.86■■■□□ 2.37
THUMPD1-203ENST00000565248 NESP48681 1621 aa29.82■■■□□ 2.36
THUMPD1-203ENST00000565248 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
THUMPD1-203ENST00000565248 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
THUMPD1-203ENST00000565248 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
THUMPD1-203ENST00000565248 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
THUMPD1-203ENST00000565248 LAMC3Q9Y6N6 1575 aa29.61■■■□□ 2.33
THUMPD1-203ENST00000565248 PEG3Q9GZU2 1588 aa29.57■■■□□ 2.32
THUMPD1-203ENST00000565248 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
THUMPD1-203ENST00000565248 KIF21AQ7Z4S6 1674 aa29.45■■■□□ 2.31
THUMPD1-203ENST00000565248 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
THUMPD1-203ENST00000565248 TRIM41Q8WV44 630 aa29.32■■■□□ 2.28
THUMPD1-203ENST00000565248 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.27
THUMPD1-203ENST00000565248 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
THUMPD1-203ENST00000565248 WDR62O43379 1518 aa29.13■■■□□ 2.25
THUMPD1-203ENST00000565248 SUPT5HO00267 1087 aaKnown RBP29.06■■■□□ 2.24
THUMPD1-203ENST00000565248 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
THUMPD1-203ENST00000565248 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
THUMPD1-203ENST00000565248 WIZO95785 1651 aa29.01■■■□□ 2.23
THUMPD1-203ENST00000565248 FANCD2Q9BXW9 1451 aa28.92■■■□□ 2.22
THUMPD1-203ENST00000565248 OSCARQ8IYS5 282 aa28.9■■■□□ 2.22
THUMPD1-203ENST00000565248 CFTRP13569 1480 aa28.8■■■□□ 2.2
THUMPD1-203ENST00000565248 URB2Q14146 1524 aaKnown RBP28.67■■■□□ 2.18
THUMPD1-203ENST00000565248 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
THUMPD1-203ENST00000565248 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
THUMPD1-203ENST00000565248 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
THUMPD1-203ENST00000565248 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
THUMPD1-203ENST00000565248 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
THUMPD1-203ENST00000565248 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
THUMPD1-203ENST00000565248 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
THUMPD1-203ENST00000565248 ARHGEF11O15085 1522 aa28.37■■■□□ 2.13
THUMPD1-203ENST00000565248 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
THUMPD1-203ENST00000565248 ABCC8Q09428 1581 aa28.3■■■□□ 2.12
THUMPD1-203ENST00000565248 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
THUMPD1-203ENST00000565248 EIF4G3O43432 1585 aaKnown RBP28.24■■■□□ 2.11
THUMPD1-203ENST00000565248 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
THUMPD1-203ENST00000565248 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
THUMPD1-203ENST00000565248 CHD1O14646 1710 aa28.14■■■□□ 2.1
THUMPD1-203ENST00000565248 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
THUMPD1-203ENST00000565248 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.095e-10■■■■□ 23.4
THUMPD1-203ENST00000565248 FBLN2P98095 1184 aa28.1■■■□□ 2.09
THUMPD1-203ENST00000565248 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
THUMPD1-203ENST00000565248 ARAP1Q96P48 1450 aa28.03■■■□□ 2.08
THUMPD1-203ENST00000565248 POLA1P09884 1462 aaPredicted RBP27.98■■■□□ 2.07
THUMPD1-203ENST00000565248 SOGA1O94964 1423 aa27.9■■■□□ 2.06
THUMPD1-203ENST00000565248 RAD54L2Q9Y4B4 1467 aa27.87■■■□□ 2.05
THUMPD1-203ENST00000565248 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
THUMPD1-203ENST00000565248 WDR97A6NE52 1622 aa27.83■■■□□ 2.05
THUMPD1-203ENST00000565248 CHMP7Q8WUX9 453 aaPredicted RBP27.82■■■□□ 2.04
THUMPD1-203ENST00000565248 SNAPC4Q5SXM2 1469 aa27.81■■■□□ 2.04
THUMPD1-203ENST00000565248 SYNJ1O43426 1573 aa27.79■■■□□ 2.04
THUMPD1-203ENST00000565248 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
THUMPD1-203ENST00000565248 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
THUMPD1-203ENST00000565248 FGD5Q6ZNL6 1462 aa27.74■■■□□ 2.03
THUMPD1-203ENST00000565248 GRIN2BQ13224 1484 aa27.7■■■□□ 2.03
THUMPD1-203ENST00000565248 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
THUMPD1-203ENST00000565248 CUX1P39880 1505 aa27.62■■■□□ 2.01
THUMPD1-203ENST00000565248 PBRM1Q86U86 1689 aa27.55■■■□□ 2
THUMPD1-203ENST00000565248 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
THUMPD1-203ENST00000565248 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
THUMPD1-203ENST00000565248 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
THUMPD1-203ENST00000565248 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.97
THUMPD1-203ENST00000565248 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
THUMPD1-203ENST00000565248 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.96
THUMPD1-203ENST00000565248 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
THUMPD1-203ENST00000565248 NUP160Q12769 1436 aa27.23■■□□□ 1.95
THUMPD1-203ENST00000565248 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
THUMPD1-203ENST00000565248 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
THUMPD1-203ENST00000565248 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
THUMPD1-203ENST00000565248 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
THUMPD1-203ENST00000565248 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
THUMPD1-203ENST00000565248 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
THUMPD1-203ENST00000565248 KIF13AQ9H1H9 1805 aa27.07■■□□□ 1.92
THUMPD1-203ENST00000565248 PRG4Q92954 1404 aaPredicted RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms