RNA–Protein interactions for RNA: ENST00000565071.1

CTU2-207, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 2

Gene CTU2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-207ENST00000565071 NISCHQ9Y2I1 1504 aa52.61■■■■■ 6.01
CTU2-207ENST00000565071 CCDC180Q9P1Z9 1646 aa46.78■■■■■ 5.08
CTU2-207ENST00000565071 ABCC9O60706 1549 aa45.63■■■■■ 4.9
CTU2-207ENST00000565071 RB1CC1Q8TDY2 1594 aa43.97■■■■■ 4.63
CTU2-207ENST00000565071 NACADO15069 1562 aa43.96■■■■■ 4.63
CTU2-207ENST00000565071 ZCCHC6Q5VYS8 1495 aaKnown RBP43.85■■■■■ 4.61
CTU2-207ENST00000565071 DCAF8L2P0C7V8 631 aa43.84■■■■■ 4.61
CTU2-207ENST00000565071 MYO15BQ96JP2 1530 aa43.74■■■■■ 4.59
CTU2-207ENST00000565071 DCAF1Q9Y4B6 1507 aa43.57■■■■■ 4.56
CTU2-207ENST00000565071 UNC13AQ9UPW8 1703 aa42.97■■■■■ 4.47
CTU2-207ENST00000565071 SCRIBQ14160 1630 aa42.64■■■■■ 4.42
CTU2-207ENST00000565071 PABPN1Q86U42 306 aaKnown RBP eCLIP42.63■■■■■ 4.41
CTU2-207ENST00000565071 BICRAQ9NZM4 1560 aa42.63■■■■■ 4.41
CTU2-207ENST00000565071 SHROOM4Q9ULL8 1493 aa42.25■■■■■ 4.35
CTU2-207ENST00000565071 DNAJC5BQ9UF47 199 aa41.78■■■■■ 4.28
CTU2-207ENST00000565071 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
CTU2-207ENST00000565071 CC2D2AQ9P2K1 1620 aa41.31■■■■■ 4.2
CTU2-207ENST00000565071 CECR2Q9BXF3 1484 aa41.02■■■■■ 4.16
CTU2-207ENST00000565071 SMARCA4P51532 1647 aa40.82■■■■■ 4.12
CTU2-207ENST00000565071 BAZ1AQ9NRL2 1556 aaPredicted RBP40.78■■■■■ 4.12
CTU2-207ENST00000565071 ATAD2BQ9ULI0 1458 aa40.57■■■■■ 4.08
CTU2-207ENST00000565071 SMARCA2P51531 1590 aa40.55■■■■■ 4.08
CTU2-207ENST00000565071 NCAPD3P42695 1498 aa40.54■■■■■ 4.08
CTU2-207ENST00000565071 MROH2BQ7Z745 1585 aa40.52■■■■■ 4.08
CTU2-207ENST00000565071 PEG3Q9GZU2 1588 aa40.44■■■■■ 4.06
CTU2-207ENST00000565071 HMGXB3Q12766 1538 aa40.37■■■■■ 4.05
CTU2-207ENST00000565071 BAZ1BQ9UIG0 1483 aaKnown RBP40.25■■■■■ 4.03
CTU2-207ENST00000565071 RSF1Q96T23 1441 aaPredicted RBP40.09■■■■■ 4.01
CTU2-207ENST00000565071 WIZO95785 1651 aa40.09■■■■■ 4.01
CTU2-207ENST00000565071 TOP2AP11388 1531 aaKnown RBP39.7■■■■□ 3.95
CTU2-207ENST00000565071 NESP48681 1621 aa39.51■■■■□ 3.91
CTU2-207ENST00000565071 LAMC3Q9Y6N6 1575 aa39.47■■■■□ 3.91
CTU2-207ENST00000565071 CADPSQ9ULU8 1353 aa39.35■■■■□ 3.89
CTU2-207ENST00000565071 ERCC6Q03468 1493 aa39.35■■■■□ 3.89
CTU2-207ENST00000565071 CCDC88BA6NC98 1476 aa39.21■■■■□ 3.87
CTU2-207ENST00000565071 PDS5BQ9NTI5 1447 aa39.2■■■■□ 3.87
CTU2-207ENST00000565071 CFTRP13569 1480 aa39.15■■■■□ 3.86
CTU2-207ENST00000565071 SUPT5HO00267 1087 aaKnown RBP39.08■■■■□ 3.85
CTU2-207ENST00000565071 KIF21AQ7Z4S6 1674 aa39.07■■■■□ 3.85
CTU2-207ENST00000565071 THOC2Q8NI27 1593 aaKnown RBP38.94■■■■□ 3.82
CTU2-207ENST00000565071 CUX2O14529 1486 aa38.93■■■■□ 3.82
CTU2-207ENST00000565071 FANCD2Q9BXW9 1451 aa38.9■■■■□ 3.82
CTU2-207ENST00000565071 PRDM2Q13029 1718 aa38.89■■■■□ 3.82
CTU2-207ENST00000565071 CEP164Q9UPV0 1460 aa38.86■■■■□ 3.81
CTU2-207ENST00000565071 MRC2Q9UBG0 1479 aa38.79■■■■□ 3.8
CTU2-207ENST00000565071 WDR62O43379 1518 aa38.68■■■■□ 3.78
CTU2-207ENST00000565071 URB2Q14146 1524 aaKnown RBP38.5■■■■□ 3.75
CTU2-207ENST00000565071 ABCC8Q09428 1581 aa38.32■■■■□ 3.73
CTU2-207ENST00000565071 TOPBP1Q92547 1522 aa38.29■■■■□ 3.72
CTU2-207ENST00000565071 DNMBPQ6XZF7 1577 aa38.27■■■■□ 3.72
CTU2-207ENST00000565071 IFT140Q96RY7 1462 aa38.05■■■■□ 3.68
CTU2-207ENST00000565071 CUX1P39880 1505 aa38.03■■■■□ 3.68
CTU2-207ENST00000565071 POLA1P09884 1462 aaPredicted RBP37.97■■■■□ 3.67
CTU2-207ENST00000565071 FGD5Q6ZNL6 1462 aa37.89■■■■□ 3.66
CTU2-207ENST00000565071 TARBP1Q13395 1621 aaKnown RBP37.88■■■■□ 3.65
CTU2-207ENST00000565071 ZNF608Q9ULD9 1512 aaPredicted RBP37.84■■■■□ 3.65
CTU2-207ENST00000565071 WRNQ14191 1432 aaPredicted RBP eCLIP37.81■■■■□ 3.64
CTU2-207ENST00000565071 SOGA1O94964 1423 aa37.8■■■■□ 3.64
CTU2-207ENST00000565071 RAD54L2Q9Y4B4 1467 aa37.78■■■■□ 3.64
CTU2-207ENST00000565071 TOP2BQ02880 1626 aa37.74■■■■□ 3.63
CTU2-207ENST00000565071 BIVM-ERCC5R4GMW8 1640 aa37.74■■■■□ 3.63
CTU2-207ENST00000565071 EIF4G3O43432 1585 aaKnown RBP37.72■■■■□ 3.63
CTU2-207ENST00000565071 SYNJ1O43426 1573 aa37.72■■■■□ 3.63
CTU2-207ENST00000565071 WDR97A6NE52 1622 aa37.63■■■■□ 3.61
CTU2-207ENST00000565071 AQRO60306 1485 aaKnown RBP eCLIP37.63■■■■□ 3.612e-7■■■□□ 16.3
CTU2-207ENST00000565071 DNAJC5Q9H3Z4 198 aa37.61■■■■□ 3.61
CTU2-207ENST00000565071 TDRD9Q8NDG6 1382 aaKnown RBP37.56■■■■□ 3.6
CTU2-207ENST00000565071 ABCA10Q8WWZ4 1543 aa37.54■■■■□ 3.6
CTU2-207ENST00000565071 ABCA5Q8WWZ7 1642 aa37.39■■■■□ 3.58
CTU2-207ENST00000565071 GAPVD1Q14C86 1478 aa37.39■■■■□ 3.58
CTU2-207ENST00000565071 GRIN2BQ13224 1484 aa37.38■■■■□ 3.57
CTU2-207ENST00000565071 PBRM1Q86U86 1689 aa37.31■■■■□ 3.56
CTU2-207ENST00000565071 SNAPC4Q5SXM2 1469 aa37.31■■■■□ 3.56
CTU2-207ENST00000565071 OSCARQ8IYS5 282 aa37.3■■■■□ 3.56
CTU2-207ENST00000565071 MAGI1Q96QZ7 1491 aaPredicted RBP37.28■■■■□ 3.56
CTU2-207ENST00000565071 CHD1O14646 1710 aa37.22■■■■□ 3.55
CTU2-207ENST00000565071 FBLN2P98095 1184 aa37.14■■■■□ 3.54
CTU2-207ENST00000565071 SYNJ2O15056 1496 aa37.13■■■■□ 3.53
CTU2-207ENST00000565071 ERICH3Q5RHP9 1530 aa37.1■■■■□ 3.53
CTU2-207ENST00000565071 CHMP7Q8WUX9 453 aaPredicted RBP37.07■■■■□ 3.52
CTU2-207ENST00000565071 ADAMTS12P58397 1594 aa37.03■■■■□ 3.52
CTU2-207ENST00000565071 KIF27Q86VH2 1401 aa37.02■■■■□ 3.52
CTU2-207ENST00000565071 FHAD1B1AJZ9 1412 aa36.96■■■■□ 3.51
CTU2-207ENST00000565071 TRIM41Q8WV44 630 aa36.94■■■■□ 3.5
CTU2-207ENST00000565071 GRIN2AQ12879 1464 aa36.89■■■■□ 3.5
CTU2-207ENST00000565071 IGF1RP08069 1367 aa36.85■■■■□ 3.49
CTU2-207ENST00000565071 CLASP1Q7Z460 1538 aa36.84■■■■□ 3.49
CTU2-207ENST00000565071 CUL7Q14999 1698 aa36.79■■■■□ 3.48
CTU2-207ENST00000565071 NUP160Q12769 1436 aa36.74■■■■□ 3.47
CTU2-207ENST00000565071 ARHGEF11O15085 1522 aa36.71■■■■□ 3.47
CTU2-207ENST00000565071 RIMBP3CA6NJZ7 1639 aa36.7■■■■□ 3.47
CTU2-207ENST00000565071 RIMBP3BA6NNM3 1639 aa36.7■■■■□ 3.47
CTU2-207ENST00000565071 RIMBP3Q9UFD9 1639 aa36.7■■■■□ 3.47
CTU2-207ENST00000565071 CEP170Q5SW79 1584 aa36.7■■■■□ 3.46
CTU2-207ENST00000565071 RUSC2Q8N2Y8 1516 aa36.66■■■■□ 3.46
CTU2-207ENST00000565071 CARMIL1Q5VZK9 1371 aa36.63■■■■□ 3.45
CTU2-207ENST00000565071 CHIC1Q5VXU3 224 aa36.53■■■■□ 3.44
CTU2-207ENST00000565071 SHROOM2Q13796 1616 aa36.46■■■■□ 3.43
CTU2-207ENST00000565071 RAPGEF2Q9Y4G8 1499 aa36.43■■■■□ 3.42
CTU2-207ENST00000565071 ARAP1Q96P48 1450 aa36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms