RNA–Protein interactions for RNA: ENST00000565051.5

NEIL1-208, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-208ENST00000565051 NISCHQ9Y2I1 1504 aa40.2■■■■■ 4.03
NEIL1-208ENST00000565051 ABCC9O60706 1549 aa36.79■■■■□ 3.48
NEIL1-208ENST00000565051 CCDC180Q9P1Z9 1646 aa36.23■■■■□ 3.39
NEIL1-208ENST00000565051 DNAJC5BQ9UF47 199 aa34.85■■■■□ 3.17
NEIL1-208ENST00000565051 RB1CC1Q8TDY2 1594 aa34.8■■■■□ 3.16
NEIL1-208ENST00000565051 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
NEIL1-208ENST00000565051 NACADO15069 1562 aa34.42■■■■□ 3.1
NEIL1-208ENST00000565051 PABPN1Q86U42 306 aaKnown RBP eCLIP34.25■■■■□ 3.07
NEIL1-208ENST00000565051 UNC13AQ9UPW8 1703 aa33.88■■■■□ 3.01
NEIL1-208ENST00000565051 MYO15BQ96JP2 1530 aa33.72■■■□□ 2.99
NEIL1-208ENST00000565051 BICRAQ9NZM4 1560 aa33.65■■■□□ 2.98
NEIL1-208ENST00000565051 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
NEIL1-208ENST00000565051 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
NEIL1-208ENST00000565051 ZCCHC6Q5VYS8 1495 aaKnown RBP33.17■■■□□ 2.9
NEIL1-208ENST00000565051 CC2D2AQ9P2K1 1620 aa33.15■■■□□ 2.9
NEIL1-208ENST00000565051 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
NEIL1-208ENST00000565051 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
NEIL1-208ENST00000565051 EIF4G1Q04637 1599 aaKnown RBP32.95■■■□□ 2.86
NEIL1-208ENST00000565051 DNAJC5Q9H3Z4 198 aa32.42■■■□□ 2.78
NEIL1-208ENST00000565051 ERCC6Q03468 1493 aa31.89■■■□□ 2.7
NEIL1-208ENST00000565051 CUX2O14529 1486 aa31.86■■■□□ 2.69
NEIL1-208ENST00000565051 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
NEIL1-208ENST00000565051 ATAD2BQ9ULI0 1458 aa31.61■■■□□ 2.65
NEIL1-208ENST00000565051 SMARCA2P51531 1590 aa31.54■■■□□ 2.64
NEIL1-208ENST00000565051 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
NEIL1-208ENST00000565051 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
NEIL1-208ENST00000565051 NESP48681 1621 aa31.42■■■□□ 2.62
NEIL1-208ENST00000565051 BAZ1BQ9UIG0 1483 aaKnown RBP31.35■■■□□ 2.61
NEIL1-208ENST00000565051 BAZ1AQ9NRL2 1556 aaPredicted RBP31.27■■■□□ 2.6
NEIL1-208ENST00000565051 LAMC3Q9Y6N6 1575 aa31.14■■■□□ 2.58
NEIL1-208ENST00000565051 THOC2Q8NI27 1593 aaKnown RBP31.11■■■□□ 2.57
NEIL1-208ENST00000565051 PEG3Q9GZU2 1588 aa31.08■■■□□ 2.57
NEIL1-208ENST00000565051 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.57
NEIL1-208ENST00000565051 KIF21AQ7Z4S6 1674 aa30.97■■■□□ 2.55
NEIL1-208ENST00000565051 TRIM41Q8WV44 630 aa30.96■■■□□ 2.55
NEIL1-208ENST00000565051 MROH2BQ7Z745 1585 aa30.96■■■□□ 2.55
NEIL1-208ENST00000565051 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
NEIL1-208ENST00000565051 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
NEIL1-208ENST00000565051 WDR62O43379 1518 aa30.63■■■□□ 2.49
NEIL1-208ENST00000565051 WIZO95785 1651 aa30.58■■■□□ 2.49
NEIL1-208ENST00000565051 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
NEIL1-208ENST00000565051 OSCARQ8IYS5 282 aa30.49■■■□□ 2.47
NEIL1-208ENST00000565051 FANCD2Q9BXW9 1451 aa30.49■■■□□ 2.47
NEIL1-208ENST00000565051 CFTRP13569 1480 aa30.33■■■□□ 2.45
NEIL1-208ENST00000565051 URB2Q14146 1524 aaKnown RBP30.2■■■□□ 2.42
NEIL1-208ENST00000565051 RSF1Q96T23 1441 aaPredicted RBP30.18■■■□□ 2.42
NEIL1-208ENST00000565051 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
NEIL1-208ENST00000565051 IFT140Q96RY7 1462 aa29.97■■■□□ 2.39
NEIL1-208ENST00000565051 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
NEIL1-208ENST00000565051 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
NEIL1-208ENST00000565051 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
NEIL1-208ENST00000565051 PRDM2Q13029 1718 aa29.96■■■□□ 2.39
NEIL1-208ENST00000565051 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
NEIL1-208ENST00000565051 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
NEIL1-208ENST00000565051 ARHGEF11O15085 1522 aa29.83■■■□□ 2.37
NEIL1-208ENST00000565051 TOPBP1Q92547 1522 aa29.82■■■□□ 2.36
NEIL1-208ENST00000565051 CYB5RLQ6IPT4 315 aa29.82■■■□□ 2.36
NEIL1-208ENST00000565051 ABCC8Q09428 1581 aa29.81■■■□□ 2.36
NEIL1-208ENST00000565051 FBLN2P98095 1184 aa29.75■■■□□ 2.35
NEIL1-208ENST00000565051 TRHP20396 242 aaPredicted RBP29.73■■■□□ 2.35
NEIL1-208ENST00000565051 EIF4G3O43432 1585 aaKnown RBP29.71■■■□□ 2.35
NEIL1-208ENST00000565051 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
NEIL1-208ENST00000565051 AQRO60306 1485 aaKnown RBP eCLIP29.65■■■□□ 2.34
NEIL1-208ENST00000565051 CHD1O14646 1710 aa29.59■■■□□ 2.33
NEIL1-208ENST00000565051 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
NEIL1-208ENST00000565051 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
NEIL1-208ENST00000565051 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
NEIL1-208ENST00000565051 SOGA1O94964 1423 aa29.44■■■□□ 2.3
NEIL1-208ENST00000565051 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
NEIL1-208ENST00000565051 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
NEIL1-208ENST00000565051 CHMP7Q8WUX9 453 aaPredicted RBP29.41■■■□□ 2.3
NEIL1-208ENST00000565051 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
NEIL1-208ENST00000565051 FGD5Q6ZNL6 1462 aa29.26■■■□□ 2.27
NEIL1-208ENST00000565051 SYNJ1O43426 1573 aa29.26■■■□□ 2.27
NEIL1-208ENST00000565051 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
NEIL1-208ENST00000565051 WDR97A6NE52 1622 aa29.23■■■□□ 2.27
NEIL1-208ENST00000565051 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
NEIL1-208ENST00000565051 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
NEIL1-208ENST00000565051 CLASP1Q7Z460 1538 aa29.19■■■□□ 2.26
NEIL1-208ENST00000565051 SYNJ2O15056 1496 aa29.13■■■□□ 2.25
NEIL1-208ENST00000565051 CUX1P39880 1505 aa29.11■■■□□ 2.25
NEIL1-208ENST00000565051 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
NEIL1-208ENST00000565051 PBRM1Q86U86 1689 aa28.98■■■□□ 2.23
NEIL1-208ENST00000565051 ABCA10Q8WWZ4 1543 aa28.88■■■□□ 2.21
NEIL1-208ENST00000565051 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
NEIL1-208ENST00000565051 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
NEIL1-208ENST00000565051 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
NEIL1-208ENST00000565051 SUPT5HO00267 1087 aaKnown RBP28.76■■■□□ 2.19
NEIL1-208ENST00000565051 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
NEIL1-208ENST00000565051 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
NEIL1-208ENST00000565051 NUP160Q12769 1436 aa28.66■■■□□ 2.18
NEIL1-208ENST00000565051 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
NEIL1-208ENST00000565051 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
NEIL1-208ENST00000565051 NPM1P06748 294 aaKnown RBP eCLIP28.55■■■□□ 2.16
NEIL1-208ENST00000565051 TOP2BQ02880 1626 aa28.54■■■□□ 2.16
NEIL1-208ENST00000565051 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
NEIL1-208ENST00000565051 PRG4Q92954 1404 aaPredicted RBP28.53■■■□□ 2.16
NEIL1-208ENST00000565051 JPH4Q96JJ6 628 aa28.53■■■□□ 2.16
NEIL1-208ENST00000565051 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
NEIL1-208ENST00000565051 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms