RNA–Protein interactions for RNA: ENST00000564500.5

NEIL1-204, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-204ENST00000564500 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
NEIL1-204ENST00000564500 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
NEIL1-204ENST00000564500 ABCC9O60706 1549 aa27.51■■■□□ 2
NEIL1-204ENST00000564500 RB1CC1Q8TDY2 1594 aa26.34■■□□□ 1.81
NEIL1-204ENST00000564500 NACADO15069 1562 aa26.22■■□□□ 1.79
NEIL1-204ENST00000564500 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
NEIL1-204ENST00000564500 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
NEIL1-204ENST00000564500 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
NEIL1-204ENST00000564500 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
NEIL1-204ENST00000564500 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
NEIL1-204ENST00000564500 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
NEIL1-204ENST00000564500 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
NEIL1-204ENST00000564500 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
NEIL1-204ENST00000564500 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
NEIL1-204ENST00000564500 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
NEIL1-204ENST00000564500 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.58
NEIL1-204ENST00000564500 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
NEIL1-204ENST00000564500 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.56
NEIL1-204ENST00000564500 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
NEIL1-204ENST00000564500 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
NEIL1-204ENST00000564500 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
NEIL1-204ENST00000564500 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
NEIL1-204ENST00000564500 HMGXB3Q12766 1538 aa24.04■■□□□ 1.44
NEIL1-204ENST00000564500 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
NEIL1-204ENST00000564500 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
NEIL1-204ENST00000564500 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
NEIL1-204ENST00000564500 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
NEIL1-204ENST00000564500 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
NEIL1-204ENST00000564500 CUX2O14529 1486 aa23.79■■□□□ 1.4
NEIL1-204ENST00000564500 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
NEIL1-204ENST00000564500 NESP48681 1621 aa23.64■■□□□ 1.38
NEIL1-204ENST00000564500 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
NEIL1-204ENST00000564500 PDS5BQ9NTI5 1447 aa23.49■■□□□ 1.35
NEIL1-204ENST00000564500 WIZO95785 1651 aa23.48■■□□□ 1.35
NEIL1-204ENST00000564500 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
NEIL1-204ENST00000564500 THOC2Q8NI27 1593 aaKnown RBP23.45■■□□□ 1.34
NEIL1-204ENST00000564500 CADPSQ9ULU8 1353 aa23.43■■□□□ 1.34
NEIL1-204ENST00000564500 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
NEIL1-204ENST00000564500 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
NEIL1-204ENST00000564500 MRC2Q9UBG0 1479 aa23.26■■□□□ 1.31
NEIL1-204ENST00000564500 WDR62O43379 1518 aa23.2■■□□□ 1.3
NEIL1-204ENST00000564500 CFTRP13569 1480 aa23.2■■□□□ 1.3
NEIL1-204ENST00000564500 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
NEIL1-204ENST00000564500 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
NEIL1-204ENST00000564500 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
NEIL1-204ENST00000564500 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
NEIL1-204ENST00000564500 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
NEIL1-204ENST00000564500 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
NEIL1-204ENST00000564500 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
NEIL1-204ENST00000564500 ABCC8Q09428 1581 aa22.77■■□□□ 1.24
NEIL1-204ENST00000564500 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
NEIL1-204ENST00000564500 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
NEIL1-204ENST00000564500 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
NEIL1-204ENST00000564500 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
NEIL1-204ENST00000564500 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
NEIL1-204ENST00000564500 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
NEIL1-204ENST00000564500 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
NEIL1-204ENST00000564500 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
NEIL1-204ENST00000564500 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
NEIL1-204ENST00000564500 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
NEIL1-204ENST00000564500 SOGA1O94964 1423 aa22.4■■□□□ 1.18
NEIL1-204ENST00000564500 FGD5Q6ZNL6 1462 aa22.36■■□□□ 1.17
NEIL1-204ENST00000564500 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
NEIL1-204ENST00000564500 CUX1P39880 1505 aa22.35■■□□□ 1.17
NEIL1-204ENST00000564500 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
NEIL1-204ENST00000564500 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
NEIL1-204ENST00000564500 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
NEIL1-204ENST00000564500 CHD1O14646 1710 aa22.29■■□□□ 1.16
NEIL1-204ENST00000564500 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
NEIL1-204ENST00000564500 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
NEIL1-204ENST00000564500 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
NEIL1-204ENST00000564500 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
NEIL1-204ENST00000564500 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
NEIL1-204ENST00000564500 FBLN2P98095 1184 aa22.22■■□□□ 1.15
NEIL1-204ENST00000564500 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
NEIL1-204ENST00000564500 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
NEIL1-204ENST00000564500 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
NEIL1-204ENST00000564500 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
NEIL1-204ENST00000564500 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
NEIL1-204ENST00000564500 BIVM-ERCC5R4GMW8 1640 aa22.1■■□□□ 1.13
NEIL1-204ENST00000564500 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
NEIL1-204ENST00000564500 CLASP1Q7Z460 1538 aa22.1■■□□□ 1.13
NEIL1-204ENST00000564500 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
NEIL1-204ENST00000564500 PBRM1Q86U86 1689 aa22.08■■□□□ 1.13
NEIL1-204ENST00000564500 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
NEIL1-204ENST00000564500 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
NEIL1-204ENST00000564500 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
NEIL1-204ENST00000564500 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
NEIL1-204ENST00000564500 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
NEIL1-204ENST00000564500 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
NEIL1-204ENST00000564500 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.1
NEIL1-204ENST00000564500 NUP160Q12769 1436 aa21.87■■□□□ 1.09
NEIL1-204ENST00000564500 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
NEIL1-204ENST00000564500 TRHP20396 242 aaPredicted RBP21.78■■□□□ 1.08
NEIL1-204ENST00000564500 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
NEIL1-204ENST00000564500 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
NEIL1-204ENST00000564500 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
NEIL1-204ENST00000564500 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
NEIL1-204ENST00000564500 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
NEIL1-204ENST00000564500 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms