RNA–Protein interactions for RNA: ENST00000564457.1

LYRM1-206, Transcript of LYR motif containing 1, humanhuman

TSL 3

Gene LYRM1, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-206ENST00000564457 NISCHQ9Y2I1 1504 aa41.71■■■■■ 4.27
LYRM1-206ENST00000564457 ABCC9O60706 1549 aa38.07■■■■□ 3.68
LYRM1-206ENST00000564457 CCDC180Q9P1Z9 1646 aa37.49■■■■□ 3.59
LYRM1-206ENST00000564457 DNAJC5BQ9UF47 199 aa36.26■■■■□ 3.4
LYRM1-206ENST00000564457 RB1CC1Q8TDY2 1594 aa36.01■■■■□ 3.35
LYRM1-206ENST00000564457 NACADO15069 1562 aa35.68■■■■□ 3.3
LYRM1-206ENST00000564457 DCAF8L2P0C7V8 631 aa35.56■■■■□ 3.28
LYRM1-206ENST00000564457 PABPN1Q86U42 306 aaKnown RBP eCLIP35.48■■■■□ 3.27
LYRM1-206ENST00000564457 MYO15BQ96JP2 1530 aa35.1■■■■□ 3.21
LYRM1-206ENST00000564457 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
LYRM1-206ENST00000564457 BICRAQ9NZM4 1560 aa34.94■■■■□ 3.18
LYRM1-206ENST00000564457 SHROOM4Q9ULL8 1493 aa34.52■■■■□ 3.12
LYRM1-206ENST00000564457 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.1
LYRM1-206ENST00000564457 ZCCHC6Q5VYS8 1495 aaKnown RBP34.42■■■■□ 3.1
LYRM1-206ENST00000564457 CECR2Q9BXF3 1484 aa34.38■■■■□ 3.09
LYRM1-206ENST00000564457 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
LYRM1-206ENST00000564457 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
LYRM1-206ENST00000564457 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
LYRM1-206ENST00000564457 DNAJC5Q9H3Z4 198 aa33.7■■■□□ 2.99
LYRM1-206ENST00000564457 NCAPD3P42695 1498 aa33.04■■■□□ 2.88
LYRM1-206ENST00000564457 CUX2O14529 1486 aa33.03■■■□□ 2.88
LYRM1-206ENST00000564457 ERCC6Q03468 1493 aa32.92■■■□□ 2.86
LYRM1-206ENST00000564457 ATAD2BQ9ULI0 1458 aa32.81■■■□□ 2.84
LYRM1-206ENST00000564457 SMARCA2P51531 1590 aa32.66■■■□□ 2.82
LYRM1-206ENST00000564457 HMGXB3Q12766 1538 aa32.61■■■□□ 2.81
LYRM1-206ENST00000564457 NESP48681 1621 aa32.55■■■□□ 2.8
LYRM1-206ENST00000564457 SMARCA4P51532 1647 aa32.54■■■□□ 2.8
LYRM1-206ENST00000564457 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
LYRM1-206ENST00000564457 BAZ1AQ9NRL2 1556 aaPredicted RBP32.39■■■□□ 2.78
LYRM1-206ENST00000564457 PEG3Q9GZU2 1588 aa32.29■■■□□ 2.76
LYRM1-206ENST00000564457 LAMC3Q9Y6N6 1575 aa32.25■■■□□ 2.75
LYRM1-206ENST00000564457 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
LYRM1-206ENST00000564457 PDS5BQ9NTI5 1447 aa32.2■■■□□ 2.75
LYRM1-206ENST00000564457 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
LYRM1-206ENST00000564457 CADPSQ9ULU8 1353 aa32.03■■■□□ 2.72
LYRM1-206ENST00000564457 KIF21AQ7Z4S6 1674 aa31.95■■■□□ 2.71
LYRM1-206ENST00000564457 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
LYRM1-206ENST00000564457 MRC2Q9UBG0 1479 aa31.85■■■□□ 2.69
LYRM1-206ENST00000564457 WDR62O43379 1518 aa31.75■■■□□ 2.67
LYRM1-206ENST00000564457 CEP164Q9UPV0 1460 aa31.63■■■□□ 2.65
LYRM1-206ENST00000564457 WIZO95785 1651 aa31.61■■■□□ 2.65
LYRM1-206ENST00000564457 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
LYRM1-206ENST00000564457 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
LYRM1-206ENST00000564457 CFTRP13569 1480 aa31.52■■■□□ 2.64
LYRM1-206ENST00000564457 RSF1Q96T23 1441 aaPredicted RBP31.35■■■□□ 2.61
LYRM1-206ENST00000564457 URB2Q14146 1524 aaKnown RBP31.31■■■□□ 2.6
LYRM1-206ENST00000564457 TOP2AP11388 1531 aaKnown RBP31.24■■■□□ 2.59
LYRM1-206ENST00000564457 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
LYRM1-206ENST00000564457 ZNF608Q9ULD9 1512 aaPredicted RBP31.01■■■□□ 2.55
LYRM1-206ENST00000564457 RIMBP3CA6NJZ7 1639 aa30.98■■■□□ 2.55
LYRM1-206ENST00000564457 RIMBP3BA6NNM3 1639 aa30.98■■■□□ 2.55
LYRM1-206ENST00000564457 RIMBP3Q9UFD9 1639 aa30.98■■■□□ 2.55
LYRM1-206ENST00000564457 CCDC88BA6NC98 1476 aa30.97■■■□□ 2.55
LYRM1-206ENST00000564457 ARHGEF11O15085 1522 aa30.9■■■□□ 2.54
LYRM1-206ENST00000564457 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
LYRM1-206ENST00000564457 ABCC8Q09428 1581 aa30.9■■■□□ 2.54
LYRM1-206ENST00000564457 CYB5RLQ6IPT4 315 aa30.87■■■□□ 2.53
LYRM1-206ENST00000564457 PRDM2Q13029 1718 aa30.85■■■□□ 2.53
LYRM1-206ENST00000564457 AQRO60306 1485 aaKnown RBP eCLIP30.73■■■□□ 2.51
LYRM1-206ENST00000564457 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
LYRM1-206ENST00000564457 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
LYRM1-206ENST00000564457 FBLN2P98095 1184 aa30.7■■■□□ 2.51
LYRM1-206ENST00000564457 TRHP20396 242 aaPredicted RBP30.66■■■□□ 2.5
LYRM1-206ENST00000564457 TARBP1Q13395 1621 aaKnown RBP30.61■■■□□ 2.49
LYRM1-206ENST00000564457 POLA1P09884 1462 aaPredicted RBP30.56■■■□□ 2.48
LYRM1-206ENST00000564457 ARAP1Q96P48 1450 aa30.56■■■□□ 2.48
LYRM1-206ENST00000564457 SOGA1O94964 1423 aa30.51■■■□□ 2.47
LYRM1-206ENST00000564457 TDRD9Q8NDG6 1382 aaKnown RBP30.5■■■□□ 2.47
LYRM1-206ENST00000564457 CHD1O14646 1710 aa30.5■■■□□ 2.47
LYRM1-206ENST00000564457 RAD54L2Q9Y4B4 1467 aa30.47■■■□□ 2.47
LYRM1-206ENST00000564457 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
LYRM1-206ENST00000564457 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
LYRM1-206ENST00000564457 FGD5Q6ZNL6 1462 aa30.29■■■□□ 2.44
LYRM1-206ENST00000564457 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
LYRM1-206ENST00000564457 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
LYRM1-206ENST00000564457 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
LYRM1-206ENST00000564457 GRIN2BQ13224 1484 aa30.25■■■□□ 2.43
LYRM1-206ENST00000564457 SYNJ1O43426 1573 aa30.23■■■□□ 2.43
LYRM1-206ENST00000564457 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
LYRM1-206ENST00000564457 CUX1P39880 1505 aa30.17■■■□□ 2.42
LYRM1-206ENST00000564457 AEBP2Q6ZN18 517 aaPredicted RBP30.12■■■□□ 2.41
LYRM1-206ENST00000564457 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
LYRM1-206ENST00000564457 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
LYRM1-206ENST00000564457 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
LYRM1-206ENST00000564457 ABCA5Q8WWZ7 1642 aa29.84■■■□□ 2.37
LYRM1-206ENST00000564457 GRIN2AQ12879 1464 aa29.82■■■□□ 2.36
LYRM1-206ENST00000564457 WRNQ14191 1432 aaPredicted RBP eCLIP29.81■■■□□ 2.36
LYRM1-206ENST00000564457 NUP160Q12769 1436 aa29.77■■■□□ 2.36
LYRM1-206ENST00000564457 ERCC6L2Q5T890 1561 aa29.74■■■□□ 2.35
LYRM1-206ENST00000564457 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
LYRM1-206ENST00000564457 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
LYRM1-206ENST00000564457 SUPT5HO00267 1087 aaKnown RBP29.67■■■□□ 2.34
LYRM1-206ENST00000564457 ADAMTS12P58397 1594 aa29.64■■■□□ 2.33
LYRM1-206ENST00000564457 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
LYRM1-206ENST00000564457 SHROOM2Q13796 1616 aa29.59■■■□□ 2.33
LYRM1-206ENST00000564457 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
LYRM1-206ENST00000564457 PRG4Q92954 1404 aaPredicted RBP29.55■■■□□ 2.32
LYRM1-206ENST00000564457 TOP2BQ02880 1626 aa29.55■■■□□ 2.32
LYRM1-206ENST00000564457 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
LYRM1-206ENST00000564457 NPM1P06748 294 aaKnown RBP eCLIP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms