RNA–Protein interactions for RNA: ENST00000564326.5

CYLD-207, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CYLD, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-207ENST00000564326 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
CYLD-207ENST00000564326 CCDC180Q9P1Z9 1646 aa15.22■□□□□ 0.03
CYLD-207ENST00000564326 ABCC9O60706 1549 aa14.87□□□□□ -0.03
CYLD-207ENST00000564326 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
CYLD-207ENST00000564326 NACADO15069 1562 aa14.31□□□□□ -0.12
CYLD-207ENST00000564326 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
CYLD-207ENST00000564326 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
CYLD-207ENST00000564326 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
CYLD-207ENST00000564326 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
CYLD-207ENST00000564326 BICRAQ9NZM4 1560 aa14.02□□□□□ -0.17
CYLD-207ENST00000564326 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
CYLD-207ENST00000564326 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
CYLD-207ENST00000564326 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
CYLD-207ENST00000564326 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
CYLD-207ENST00000564326 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
CYLD-207ENST00000564326 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
CYLD-207ENST00000564326 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
CYLD-207ENST00000564326 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
CYLD-207ENST00000564326 CUX2O14529 1486 aa13.19□□□□□ -0.3
CYLD-207ENST00000564326 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
CYLD-207ENST00000564326 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
CYLD-207ENST00000564326 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
CYLD-207ENST00000564326 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
CYLD-207ENST00000564326 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
CYLD-207ENST00000564326 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
CYLD-207ENST00000564326 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
CYLD-207ENST00000564326 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
CYLD-207ENST00000564326 LAMC3Q9Y6N6 1575 aa12.92□□□□□ -0.34
CYLD-207ENST00000564326 BAZ1AQ9NRL2 1556 aaPredicted RBP12.92□□□□□ -0.34
CYLD-207ENST00000564326 ERCC6Q03468 1493 aa12.84□□□□□ -0.35
CYLD-207ENST00000564326 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
CYLD-207ENST00000564326 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
CYLD-207ENST00000564326 NESP48681 1621 aa12.77□□□□□ -0.36
CYLD-207ENST00000564326 AEBP2Q6ZN18 517 aaPredicted RBP12.74□□□□□ -0.37
CYLD-207ENST00000564326 WDR62O43379 1518 aa12.73□□□□□ -0.37
CYLD-207ENST00000564326 MROH2BQ7Z745 1585 aa12.71□□□□□ -0.37
CYLD-207ENST00000564326 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
CYLD-207ENST00000564326 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
CYLD-207ENST00000564326 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
CYLD-207ENST00000564326 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
CYLD-207ENST00000564326 WIZO95785 1651 aa12.55□□□□□ -0.4
CYLD-207ENST00000564326 CFTRP13569 1480 aa12.53□□□□□ -0.4
CYLD-207ENST00000564326 TOP2AP11388 1531 aaKnown RBP12.5□□□□□ -0.41
CYLD-207ENST00000564326 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
CYLD-207ENST00000564326 CHIC1Q5VXU3 224 aa12.47□□□□□ -0.41
CYLD-207ENST00000564326 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
CYLD-207ENST00000564326 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
CYLD-207ENST00000564326 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
CYLD-207ENST00000564326 WDR97A6NE52 1622 aa12.33□□□□□ -0.43
CYLD-207ENST00000564326 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
CYLD-207ENST00000564326 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
CYLD-207ENST00000564326 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
CYLD-207ENST00000564326 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
CYLD-207ENST00000564326 ABCC8Q09428 1581 aa12.31□□□□□ -0.44
CYLD-207ENST00000564326 TARBP1Q13395 1621 aaKnown RBP12.28□□□□□ -0.44
CYLD-207ENST00000564326 DNMBPQ6XZF7 1577 aa12.27□□□□□ -0.44
CYLD-207ENST00000564326 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
CYLD-207ENST00000564326 TOPBP1Q92547 1522 aa12.25□□□□□ -0.45
CYLD-207ENST00000564326 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
CYLD-207ENST00000564326 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
CYLD-207ENST00000564326 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
CYLD-207ENST00000564326 CHD1O14646 1710 aa12.21□□□□□ -0.46
CYLD-207ENST00000564326 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
CYLD-207ENST00000564326 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
CYLD-207ENST00000564326 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
CYLD-207ENST00000564326 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
CYLD-207ENST00000564326 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
CYLD-207ENST00000564326 MAGI1Q96QZ7 1491 aaPredicted RBP12.05□□□□□ -0.48
CYLD-207ENST00000564326 SYNJ1O43426 1573 aa12.02□□□□□ -0.48
CYLD-207ENST00000564326 PBRM1Q86U86 1689 aa12.02□□□□□ -0.48
CYLD-207ENST00000564326 ABCA5Q8WWZ7 1642 aa12.01□□□□□ -0.49
CYLD-207ENST00000564326 AQRO60306 1485 aaKnown RBP eCLIP11.99□□□□□ -0.49
CYLD-207ENST00000564326 CUX1P39880 1505 aa11.98□□□□□ -0.49
CYLD-207ENST00000564326 SYNJ2O15056 1496 aa11.96□□□□□ -0.49
CYLD-207ENST00000564326 GRIN2BQ13224 1484 aa11.96□□□□□ -0.49
CYLD-207ENST00000564326 SNAPC4Q5SXM2 1469 aa11.96□□□□□ -0.5
CYLD-207ENST00000564326 FGD5Q6ZNL6 1462 aa11.96□□□□□ -0.5
CYLD-207ENST00000564326 SHROOM2Q13796 1616 aa11.96□□□□□ -0.5
CYLD-207ENST00000564326 ABCA10Q8WWZ4 1543 aa11.94□□□□□ -0.5
CYLD-207ENST00000564326 SOGA1O94964 1423 aa11.94□□□□□ -0.5
CYLD-207ENST00000564326 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
CYLD-207ENST00000564326 BIVM-ERCC5R4GMW8 1640 aa11.91□□□□□ -0.5
CYLD-207ENST00000564326 ADAMTS12P58397 1594 aa11.88□□□□□ -0.51
CYLD-207ENST00000564326 NUP160Q12769 1436 aa11.86□□□□□ -0.51
CYLD-207ENST00000564326 GAPVD1Q14C86 1478 aa11.84□□□□□ -0.51
CYLD-207ENST00000564326 TOP2BQ02880 1626 aa11.83□□□□□ -0.52
CYLD-207ENST00000564326 TDRD9Q8NDG6 1382 aaKnown RBP11.82□□□□□ -0.52
CYLD-207ENST00000564326 CEP170Q5SW79 1584 aa11.82□□□□□ -0.52
CYLD-207ENST00000564326 ERICH3Q5RHP9 1530 aa11.82□□□□□ -0.52
CYLD-207ENST00000564326 GRIN2AQ12879 1464 aa11.81□□□□□ -0.52
CYLD-207ENST00000564326 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
CYLD-207ENST00000564326 KIF13AQ9H1H9 1805 aa11.8□□□□□ -0.52
CYLD-207ENST00000564326 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
CYLD-207ENST00000564326 FHAD1B1AJZ9 1412 aa11.74□□□□□ -0.53
CYLD-207ENST00000564326 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
CYLD-207ENST00000564326 MAPKBP1O60336 1514 aa11.72□□□□□ -0.53
CYLD-207ENST00000564326 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.54
CYLD-207ENST00000564326 CHMP7Q8WUX9 453 aaPredicted RBP11.71□□□□□ -0.54
CYLD-207ENST00000564326 DIP2BQ9P265 1576 aa11.64□□□□□ -0.55
CYLD-207ENST00000564326 CUL7Q14999 1698 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms