RNA–Protein interactions for RNA: ENST00000564308.1

ITGAX-205, Transcript of integrin subunit alpha X, humanhuman

TSL 4

Gene ITGAX, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAX-205ENST00000564308 NISCHQ9Y2I1 1504 aa17.46■□□□□ 0.39
ITGAX-205ENST00000564308 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
ITGAX-205ENST00000564308 ABCC9O60706 1549 aa15.61■□□□□ 0.09
ITGAX-205ENST00000564308 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
ITGAX-205ENST00000564308 NACADO15069 1562 aa14.79□□□□□ -0.04
ITGAX-205ENST00000564308 DCAF8L2P0C7V8 631 aa14.72□□□□□ -0.05
ITGAX-205ENST00000564308 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
ITGAX-205ENST00000564308 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
ITGAX-205ENST00000564308 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
ITGAX-205ENST00000564308 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
ITGAX-205ENST00000564308 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
ITGAX-205ENST00000564308 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
ITGAX-205ENST00000564308 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
ITGAX-205ENST00000564308 SCRIBQ14160 1630 aa14.33□□□□□ -0.12
ITGAX-205ENST00000564308 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
ITGAX-205ENST00000564308 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
ITGAX-205ENST00000564308 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
ITGAX-205ENST00000564308 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
ITGAX-205ENST00000564308 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
ITGAX-205ENST00000564308 SMARCA2P51531 1590 aa13.61□□□□□ -0.23
ITGAX-205ENST00000564308 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
ITGAX-205ENST00000564308 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
ITGAX-205ENST00000564308 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.24
ITGAX-205ENST00000564308 HMGXB3Q12766 1538 aa13.57□□□□□ -0.24
ITGAX-205ENST00000564308 ERCC6Q03468 1493 aa13.51□□□□□ -0.25
ITGAX-205ENST00000564308 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
ITGAX-205ENST00000564308 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
ITGAX-205ENST00000564308 MROH2BQ7Z745 1585 aa13.46□□□□□ -0.25
ITGAX-205ENST00000564308 CUX2O14529 1486 aa13.42□□□□□ -0.26
ITGAX-205ENST00000564308 NESP48681 1621 aa13.42□□□□□ -0.26
ITGAX-205ENST00000564308 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
ITGAX-205ENST00000564308 WIZO95785 1651 aa13.34□□□□□ -0.27
ITGAX-205ENST00000564308 KIF21AQ7Z4S6 1674 aa13.33□□□□□ -0.28
ITGAX-205ENST00000564308 THOC2Q8NI27 1593 aaKnown RBP13.31□□□□□ -0.28
ITGAX-205ENST00000564308 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
ITGAX-205ENST00000564308 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
ITGAX-205ENST00000564308 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
ITGAX-205ENST00000564308 RSF1Q96T23 1441 aaPredicted RBP13.17□□□□□ -0.3
ITGAX-205ENST00000564308 AEBP2Q6ZN18 517 aaPredicted RBP13.16□□□□□ -0.3
ITGAX-205ENST00000564308 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
ITGAX-205ENST00000564308 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
ITGAX-205ENST00000564308 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
ITGAX-205ENST00000564308 CHIC1Q5VXU3 224 aa13.11□□□□□ -0.31
ITGAX-205ENST00000564308 WDR62O43379 1518 aa13.11□□□□□ -0.31
ITGAX-205ENST00000564308 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
ITGAX-205ENST00000564308 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
ITGAX-205ENST00000564308 CFTRP13569 1480 aa13.07□□□□□ -0.32
ITGAX-205ENST00000564308 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
ITGAX-205ENST00000564308 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
ITGAX-205ENST00000564308 TOPBP1Q92547 1522 aa12.85□□□□□ -0.35
ITGAX-205ENST00000564308 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
ITGAX-205ENST00000564308 IFT140Q96RY7 1462 aa12.83□□□□□ -0.36
ITGAX-205ENST00000564308 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
ITGAX-205ENST00000564308 ZNF608Q9ULD9 1512 aaPredicted RBP12.8□□□□□ -0.36
ITGAX-205ENST00000564308 TRIM41Q8WV44 630 aa12.8□□□□□ -0.36
ITGAX-205ENST00000564308 EIF4G3O43432 1585 aaKnown RBP12.8□□□□□ -0.36
ITGAX-205ENST00000564308 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
ITGAX-205ENST00000564308 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
ITGAX-205ENST00000564308 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
ITGAX-205ENST00000564308 CHD1O14646 1710 aa12.72□□□□□ -0.37
ITGAX-205ENST00000564308 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
ITGAX-205ENST00000564308 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
ITGAX-205ENST00000564308 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
ITGAX-205ENST00000564308 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
ITGAX-205ENST00000564308 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
ITGAX-205ENST00000564308 RAD54L2Q9Y4B4 1467 aa12.66□□□□□ -0.38
ITGAX-205ENST00000564308 FGD5Q6ZNL6 1462 aa12.65□□□□□ -0.38
ITGAX-205ENST00000564308 CUX1P39880 1505 aa12.65□□□□□ -0.38
ITGAX-205ENST00000564308 SOGA1O94964 1423 aa12.64□□□□□ -0.39
ITGAX-205ENST00000564308 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
ITGAX-205ENST00000564308 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
ITGAX-205ENST00000564308 FBLN2P98095 1184 aa12.62□□□□□ -0.39
ITGAX-205ENST00000564308 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
ITGAX-205ENST00000564308 PBRM1Q86U86 1689 aa12.6□□□□□ -0.39
ITGAX-205ENST00000564308 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
ITGAX-205ENST00000564308 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
ITGAX-205ENST00000564308 MAGI1Q96QZ7 1491 aaPredicted RBP12.55□□□□□ -0.4
ITGAX-205ENST00000564308 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
ITGAX-205ENST00000564308 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
ITGAX-205ENST00000564308 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
ITGAX-205ENST00000564308 CHMP7Q8WUX9 453 aaPredicted RBP12.51□□□□□ -0.41
ITGAX-205ENST00000564308 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
ITGAX-205ENST00000564308 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
ITGAX-205ENST00000564308 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
ITGAX-205ENST00000564308 CLASP1Q7Z460 1538 aa12.5□□□□□ -0.41
ITGAX-205ENST00000564308 ABCA10Q8WWZ4 1543 aa12.5□□□□□ -0.41
ITGAX-205ENST00000564308 CYB5RLQ6IPT4 315 aa12.49□□□□□ -0.41
ITGAX-205ENST00000564308 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
ITGAX-205ENST00000564308 WRNQ14191 1432 aaPredicted RBP eCLIP12.46□□□□□ -0.41
ITGAX-205ENST00000564308 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
ITGAX-205ENST00000564308 GRIN2AQ12879 1464 aa12.4□□□□□ -0.43
ITGAX-205ENST00000564308 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
ITGAX-205ENST00000564308 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
ITGAX-205ENST00000564308 CEP170Q5SW79 1584 aa12.36□□□□□ -0.43
ITGAX-205ENST00000564308 FHAD1B1AJZ9 1412 aa12.35□□□□□ -0.43
ITGAX-205ENST00000564308 NUP160Q12769 1436 aa12.32□□□□□ -0.44
ITGAX-205ENST00000564308 ERCC6L2Q5T890 1561 aa12.31□□□□□ -0.44
ITGAX-205ENST00000564308 SHROOM2Q13796 1616 aa12.3□□□□□ -0.44
ITGAX-205ENST00000564308 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
ITGAX-205ENST00000564308 CUL7Q14999 1698 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms