RNA–Protein interactions for RNA: ENST00000564278.1

NUP93-209, Transcript of nucleoporin 93, humanhuman

TSL 2

Gene NUP93, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-209ENST00000564278 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
NUP93-209ENST00000564278 ABCC9O60706 1549 aa15.94■□□□□ 0.14
NUP93-209ENST00000564278 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
NUP93-209ENST00000564278 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
NUP93-209ENST00000564278 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
NUP93-209ENST00000564278 NACADO15069 1562 aa14.73□□□□□ -0.05
NUP93-209ENST00000564278 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
NUP93-209ENST00000564278 UNC13AQ9UPW8 1703 aa14.72□□□□□ -0.05
NUP93-209ENST00000564278 BICRAQ9NZM4 1560 aa14.62□□□□□ -0.07
NUP93-209ENST00000564278 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
NUP93-209ENST00000564278 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
NUP93-209ENST00000564278 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
NUP93-209ENST00000564278 CECR2Q9BXF3 1484 aa14.37□□□□□ -0.11
NUP93-209ENST00000564278 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
NUP93-209ENST00000564278 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
NUP93-209ENST00000564278 SCRIBQ14160 1630 aa14.22□□□□□ -0.13
NUP93-209ENST00000564278 DNAJC5Q9H3Z4 198 aa14.19□□□□□ -0.14
NUP93-209ENST00000564278 ZCCHC6Q5VYS8 1495 aaKnown RBP14.16□□□□□ -0.14
NUP93-209ENST00000564278 DCAF1Q9Y4B6 1507 aa14.08□□□□□ -0.16
NUP93-209ENST00000564278 CUX2O14529 1486 aa13.82□□□□□ -0.2
NUP93-209ENST00000564278 ERCC6Q03468 1493 aa13.74□□□□□ -0.21
NUP93-209ENST00000564278 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
NUP93-209ENST00000564278 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
NUP93-209ENST00000564278 NESP48681 1621 aa13.62□□□□□ -0.23
NUP93-209ENST00000564278 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
NUP93-209ENST00000564278 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.23
NUP93-209ENST00000564278 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
NUP93-209ENST00000564278 HMGXB3Q12766 1538 aa13.52□□□□□ -0.25
NUP93-209ENST00000564278 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
NUP93-209ENST00000564278 SMARCA4P51532 1647 aa13.48□□□□□ -0.25
NUP93-209ENST00000564278 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
NUP93-209ENST00000564278 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
NUP93-209ENST00000564278 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
NUP93-209ENST00000564278 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
NUP93-209ENST00000564278 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
NUP93-209ENST00000564278 BAZ1AQ9NRL2 1556 aaPredicted RBP13.31□□□□□ -0.28
NUP93-209ENST00000564278 WDR62O43379 1518 aa13.26□□□□□ -0.29
NUP93-209ENST00000564278 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
NUP93-209ENST00000564278 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
NUP93-209ENST00000564278 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
NUP93-209ENST00000564278 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
NUP93-209ENST00000564278 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
NUP93-209ENST00000564278 RIMBP3CA6NJZ7 1639 aa13.08□□□□□ -0.32
NUP93-209ENST00000564278 RIMBP3BA6NNM3 1639 aa13.08□□□□□ -0.32
NUP93-209ENST00000564278 RIMBP3Q9UFD9 1639 aa13.08□□□□□ -0.32
NUP93-209ENST00000564278 WIZO95785 1651 aa13.08□□□□□ -0.32
NUP93-209ENST00000564278 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
NUP93-209ENST00000564278 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
NUP93-209ENST00000564278 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
NUP93-209ENST00000564278 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
NUP93-209ENST00000564278 CFTRP13569 1480 aa12.97□□□□□ -0.33
NUP93-209ENST00000564278 ZNF608Q9ULD9 1512 aaPredicted RBP12.94□□□□□ -0.34
NUP93-209ENST00000564278 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
NUP93-209ENST00000564278 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
NUP93-209ENST00000564278 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
NUP93-209ENST00000564278 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
NUP93-209ENST00000564278 CHD1O14646 1710 aa12.85□□□□□ -0.35
NUP93-209ENST00000564278 IFT140Q96RY7 1462 aa12.84□□□□□ -0.35
NUP93-209ENST00000564278 CYB5RLQ6IPT4 315 aa12.8□□□□□ -0.36
NUP93-209ENST00000564278 TOPBP1Q92547 1522 aa12.79□□□□□ -0.36
NUP93-209ENST00000564278 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
NUP93-209ENST00000564278 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
NUP93-209ENST00000564278 TARBP1Q13395 1621 aaKnown RBP12.73□□□□□ -0.37
NUP93-209ENST00000564278 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
NUP93-209ENST00000564278 DNMBPQ6XZF7 1577 aa12.71□□□□□ -0.37
NUP93-209ENST00000564278 CCDC88BA6NC98 1476 aa12.68□□□□□ -0.38
NUP93-209ENST00000564278 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
NUP93-209ENST00000564278 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
NUP93-209ENST00000564278 FBLN2P98095 1184 aa12.63□□□□□ -0.39
NUP93-209ENST00000564278 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
NUP93-209ENST00000564278 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
NUP93-209ENST00000564278 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
NUP93-209ENST00000564278 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
NUP93-209ENST00000564278 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
NUP93-209ENST00000564278 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.41
NUP93-209ENST00000564278 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
NUP93-209ENST00000564278 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
NUP93-209ENST00000564278 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
NUP93-209ENST00000564278 ERCC6L2Q5T890 1561 aa12.49□□□□□ -0.41
NUP93-209ENST00000564278 SOGA1O94964 1423 aa12.49□□□□□ -0.41
NUP93-209ENST00000564278 SYNJ2O15056 1496 aa12.48□□□□□ -0.41
NUP93-209ENST00000564278 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
NUP93-209ENST00000564278 CUX1P39880 1505 aa12.47□□□□□ -0.41
NUP93-209ENST00000564278 GRIN2BQ13224 1484 aa12.46□□□□□ -0.42
NUP93-209ENST00000564278 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
NUP93-209ENST00000564278 KIF13AQ9H1H9 1805 aa12.4□□□□□ -0.42
NUP93-209ENST00000564278 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
NUP93-209ENST00000564278 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
NUP93-209ENST00000564278 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
NUP93-209ENST00000564278 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
NUP93-209ENST00000564278 GRIN2AQ12879 1464 aa12.34□□□□□ -0.43
NUP93-209ENST00000564278 SHROOM2Q13796 1616 aa12.33□□□□□ -0.43
NUP93-209ENST00000564278 ABCA10Q8WWZ4 1543 aa12.32□□□□□ -0.44
NUP93-209ENST00000564278 NUP160Q12769 1436 aa12.31□□□□□ -0.44
NUP93-209ENST00000564278 DIP2BQ9P265 1576 aa12.24□□□□□ -0.45
NUP93-209ENST00000564278 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
NUP93-209ENST00000564278 ABCC10Q5T3U5 1492 aa12.21□□□□□ -0.46
NUP93-209ENST00000564278 KDM4FA0A1W2PPD8 638 aa12.2□□□□□ -0.46
NUP93-209ENST00000564278 PRG4Q92954 1404 aaPredicted RBP12.2□□□□□ -0.46
NUP93-209ENST00000564278 KDM6BO15054 1643 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms