RNA–Protein interactions for RNA: ENST00000564011.5

LCMT1-204, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 1,168 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-204ENST00000564011 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
LCMT1-204ENST00000564011 ABCC9O60706 1549 aa24.1■■□□□ 1.45
LCMT1-204ENST00000564011 CCDC180Q9P1Z9 1646 aa23.79■■□□□ 1.4
LCMT1-204ENST00000564011 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
LCMT1-204ENST00000564011 RB1CC1Q8TDY2 1594 aa22.82■■□□□ 1.24
LCMT1-204ENST00000564011 NACADO15069 1562 aa22.58■■□□□ 1.2
LCMT1-204ENST00000564011 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
LCMT1-204ENST00000564011 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
LCMT1-204ENST00000564011 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
LCMT1-204ENST00000564011 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
LCMT1-204ENST00000564011 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
LCMT1-204ENST00000564011 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
LCMT1-204ENST00000564011 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
LCMT1-204ENST00000564011 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
LCMT1-204ENST00000564011 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
LCMT1-204ENST00000564011 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
LCMT1-204ENST00000564011 DNAJC5Q9H3Z4 198 aa21.61■■□□□ 1.05
LCMT1-204ENST00000564011 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
LCMT1-204ENST00000564011 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
LCMT1-204ENST00000564011 CUX2O14529 1486 aa20.94■□□□□ 0.94
LCMT1-204ENST00000564011 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
LCMT1-204ENST00000564011 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
LCMT1-204ENST00000564011 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
LCMT1-204ENST00000564011 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
LCMT1-204ENST00000564011 ATAD2BQ9ULI0 1458 aa20.63■□□□□ 0.89
LCMT1-204ENST00000564011 NESP48681 1621 aa20.59■□□□□ 0.89
LCMT1-204ENST00000564011 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
LCMT1-204ENST00000564011 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
LCMT1-204ENST00000564011 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
LCMT1-204ENST00000564011 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
LCMT1-204ENST00000564011 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
LCMT1-204ENST00000564011 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
LCMT1-204ENST00000564011 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
LCMT1-204ENST00000564011 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
LCMT1-204ENST00000564011 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
LCMT1-204ENST00000564011 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
LCMT1-204ENST00000564011 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
LCMT1-204ENST00000564011 MRC2Q9UBG0 1479 aa20.13■□□□□ 0.81
LCMT1-204ENST00000564011 WDR62O43379 1518 aa20.06■□□□□ 0.8
LCMT1-204ENST00000564011 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.8
LCMT1-204ENST00000564011 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
LCMT1-204ENST00000564011 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
LCMT1-204ENST00000564011 WIZO95785 1651 aa19.91■□□□□ 0.78
LCMT1-204ENST00000564011 CFTRP13569 1480 aa19.83■□□□□ 0.76
LCMT1-204ENST00000564011 RIMBP3CA6NJZ7 1639 aa19.75■□□□□ 0.75
LCMT1-204ENST00000564011 RIMBP3BA6NNM3 1639 aa19.75■□□□□ 0.75
LCMT1-204ENST00000564011 RIMBP3Q9UFD9 1639 aa19.75■□□□□ 0.75
LCMT1-204ENST00000564011 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
LCMT1-204ENST00000564011 URB2Q14146 1524 aaKnown RBP19.7■□□□□ 0.74
LCMT1-204ENST00000564011 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
LCMT1-204ENST00000564011 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
LCMT1-204ENST00000564011 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
LCMT1-204ENST00000564011 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
LCMT1-204ENST00000564011 ABCC8Q09428 1581 aa19.59■□□□□ 0.73
LCMT1-204ENST00000564011 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
LCMT1-204ENST00000564011 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
LCMT1-204ENST00000564011 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
LCMT1-204ENST00000564011 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
LCMT1-204ENST00000564011 ARAP1Q96P48 1450 aa19.43■□□□□ 0.7
LCMT1-204ENST00000564011 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
LCMT1-204ENST00000564011 DNMBPQ6XZF7 1577 aa19.42■□□□□ 0.7
LCMT1-204ENST00000564011 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
LCMT1-204ENST00000564011 FBLN2P98095 1184 aa19.37■□□□□ 0.69
LCMT1-204ENST00000564011 CHD1O14646 1710 aa19.33■□□□□ 0.68
LCMT1-204ENST00000564011 AQRO60306 1485 aaKnown RBP eCLIP19.3■□□□□ 0.68
LCMT1-204ENST00000564011 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
LCMT1-204ENST00000564011 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
LCMT1-204ENST00000564011 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
LCMT1-204ENST00000564011 SOGA1O94964 1423 aa19.22■□□□□ 0.67
LCMT1-204ENST00000564011 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
LCMT1-204ENST00000564011 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
LCMT1-204ENST00000564011 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
LCMT1-204ENST00000564011 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
LCMT1-204ENST00000564011 TDRD9Q8NDG6 1382 aaKnown RBP19.15■□□□□ 0.66
LCMT1-204ENST00000564011 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
LCMT1-204ENST00000564011 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
LCMT1-204ENST00000564011 CLASP1Q7Z460 1538 aa19.13■□□□□ 0.65
LCMT1-204ENST00000564011 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
LCMT1-204ENST00000564011 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
LCMT1-204ENST00000564011 SYNJ2O15056 1496 aa19.08■□□□□ 0.64
LCMT1-204ENST00000564011 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
LCMT1-204ENST00000564011 CUX1P39880 1505 aa18.96■□□□□ 0.63
LCMT1-204ENST00000564011 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
LCMT1-204ENST00000564011 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
LCMT1-204ENST00000564011 ERCC6L2Q5T890 1561 aa18.85■□□□□ 0.61
LCMT1-204ENST00000564011 ABCA5Q8WWZ7 1642 aa18.85■□□□□ 0.61
LCMT1-204ENST00000564011 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
LCMT1-204ENST00000564011 GRIN2AQ12879 1464 aa18.83■□□□□ 0.6
LCMT1-204ENST00000564011 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
LCMT1-204ENST00000564011 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
LCMT1-204ENST00000564011 CEP170Q5SW79 1584 aa18.74■□□□□ 0.59
LCMT1-204ENST00000564011 NUP160Q12769 1436 aa18.74■□□□□ 0.59
LCMT1-204ENST00000564011 NPM1P06748 294 aaKnown RBP eCLIP18.71■□□□□ 0.59
LCMT1-204ENST00000564011 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
LCMT1-204ENST00000564011 KIF13AQ9H1H9 1805 aa18.69■□□□□ 0.58
LCMT1-204ENST00000564011 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
LCMT1-204ENST00000564011 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
LCMT1-204ENST00000564011 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
LCMT1-204ENST00000564011 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
LCMT1-204ENST00000564011 PRG4Q92954 1404 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms