RNA–Protein interactions for RNA: ENST00000563905.5

C15orf39-204, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS ALT2 TSL 4

Gene C15orf39, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-204ENST00000563905 NISCHQ9Y2I1 1504 aa38.14■■■■□ 3.7
C15orf39-204ENST00000563905 ABCC9O60706 1549 aa35.96■■■■□ 3.35
C15orf39-204ENST00000563905 CCDC180Q9P1Z9 1646 aa34.68■■■■□ 3.14
C15orf39-204ENST00000563905 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
C15orf39-204ENST00000563905 RB1CC1Q8TDY2 1594 aa33.65■■■□□ 2.98
C15orf39-204ENST00000563905 PABPN1Q86U42 306 aaKnown RBP eCLIP33.33■■■□□ 2.93
C15orf39-204ENST00000563905 NACADO15069 1562 aa33.1■■■□□ 2.89
C15orf39-204ENST00000563905 DCAF8L2P0C7V8 631 aa32.92■■■□□ 2.86
C15orf39-204ENST00000563905 UNC13AQ9UPW8 1703 aa32.76■■■□□ 2.83
C15orf39-204ENST00000563905 DNAJC5Q9H3Z4 198 aa32.71■■■□□ 2.83
C15orf39-204ENST00000563905 BICRAQ9NZM4 1560 aa32.63■■■□□ 2.81
C15orf39-204ENST00000563905 CECR2Q9BXF3 1484 aa32.49■■■□□ 2.79
C15orf39-204ENST00000563905 CC2D2AQ9P2K1 1620 aa32.35■■■□□ 2.77
C15orf39-204ENST00000563905 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
C15orf39-204ENST00000563905 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
C15orf39-204ENST00000563905 EIF4G1Q04637 1599 aaKnown RBP31.99■■■□□ 2.71
C15orf39-204ENST00000563905 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
C15orf39-204ENST00000563905 CUX2O14529 1486 aa31.4■■■□□ 2.62
C15orf39-204ENST00000563905 DCAF1Q9Y4B6 1507 aa31.36■■■□□ 2.61
C15orf39-204ENST00000563905 ZCCHC6Q5VYS8 1495 aaKnown RBP31.35■■■□□ 2.61
C15orf39-204ENST00000563905 ERCC6Q03468 1493 aa31.18■■■□□ 2.58
C15orf39-204ENST00000563905 TRIM41Q8WV44 630 aa30.97■■■□□ 2.55
C15orf39-204ENST00000563905 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
C15orf39-204ENST00000563905 NESP48681 1621 aa30.51■■■□□ 2.48
C15orf39-204ENST00000563905 THOC2Q8NI27 1593 aaKnown RBP30.39■■■□□ 2.46
C15orf39-204ENST00000563905 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
C15orf39-204ENST00000563905 SMARCA2P51531 1590 aa30.25■■■□□ 2.43
C15orf39-204ENST00000563905 HMGXB3Q12766 1538 aa30.23■■■□□ 2.43
C15orf39-204ENST00000563905 LAMC3Q9Y6N6 1575 aa30.08■■■□□ 2.41
C15orf39-204ENST00000563905 BAZ1BQ9UIG0 1483 aaKnown RBP30.04■■■□□ 2.4
C15orf39-204ENST00000563905 KIF21AQ7Z4S6 1674 aa30.04■■■□□ 2.4
C15orf39-204ENST00000563905 PDS5BQ9NTI5 1447 aa30.01■■■□□ 2.39
C15orf39-204ENST00000563905 SMARCA4P51532 1647 aa30■■■□□ 2.39
C15orf39-204ENST00000563905 BAZ1AQ9NRL2 1556 aaPredicted RBP29.89■■■□□ 2.38
C15orf39-204ENST00000563905 OSCARQ8IYS5 282 aa29.83■■■□□ 2.37
C15orf39-204ENST00000563905 MRC2Q9UBG0 1479 aa29.8■■■□□ 2.36
C15orf39-204ENST00000563905 WDR62O43379 1518 aa29.72■■■□□ 2.35
C15orf39-204ENST00000563905 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.34
C15orf39-204ENST00000563905 CADPSQ9ULU8 1353 aa29.63■■■□□ 2.33
C15orf39-204ENST00000563905 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
C15orf39-204ENST00000563905 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
C15orf39-204ENST00000563905 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
C15orf39-204ENST00000563905 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
C15orf39-204ENST00000563905 AEBP2Q6ZN18 517 aaPredicted RBP29.42■■■□□ 2.3
C15orf39-204ENST00000563905 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
C15orf39-204ENST00000563905 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.29
C15orf39-204ENST00000563905 ARHGEF11O15085 1522 aa29.33■■■□□ 2.29
C15orf39-204ENST00000563905 FANCD2Q9BXW9 1451 aa29.32■■■□□ 2.28
C15orf39-204ENST00000563905 CYB5RLQ6IPT4 315 aa29.26■■■□□ 2.27
C15orf39-204ENST00000563905 URB2Q14146 1524 aaKnown RBP29.12■■■□□ 2.25
C15orf39-204ENST00000563905 CFTRP13569 1480 aa29.01■■■□□ 2.23
C15orf39-204ENST00000563905 WIZO95785 1651 aa28.98■■■□□ 2.23
C15orf39-204ENST00000563905 ZNF608Q9ULD9 1512 aaPredicted RBP28.97■■■□□ 2.23
C15orf39-204ENST00000563905 ARAP1Q96P48 1450 aa28.95■■■□□ 2.22
C15orf39-204ENST00000563905 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
C15orf39-204ENST00000563905 FBLN2P98095 1184 aa28.76■■■□□ 2.19
C15orf39-204ENST00000563905 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
C15orf39-204ENST00000563905 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
C15orf39-204ENST00000563905 CHD1O14646 1710 aa28.72■■■□□ 2.19
C15orf39-204ENST00000563905 TOPBP1Q92547 1522 aa28.61■■■□□ 2.17
C15orf39-204ENST00000563905 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.171e-7■■■□□ 17.9
C15orf39-204ENST00000563905 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
C15orf39-204ENST00000563905 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
C15orf39-204ENST00000563905 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
C15orf39-204ENST00000563905 DNMBPQ6XZF7 1577 aa28.39■■■□□ 2.14
C15orf39-204ENST00000563905 TARBP1Q13395 1621 aaKnown RBP28.39■■■□□ 2.13
C15orf39-204ENST00000563905 CLASP1Q7Z460 1538 aa28.35■■■□□ 2.13
C15orf39-204ENST00000563905 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
C15orf39-204ENST00000563905 CHMP7Q8WUX9 453 aaPredicted RBP28.3■■■□□ 2.12
C15orf39-204ENST00000563905 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
C15orf39-204ENST00000563905 POLA1P09884 1462 aaPredicted RBP28.25■■■□□ 2.11
C15orf39-204ENST00000563905 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
C15orf39-204ENST00000563905 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
C15orf39-204ENST00000563905 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
C15orf39-204ENST00000563905 ILDR1Q86SU0 546 aaPredicted RBP28.21■■■□□ 2.11
C15orf39-204ENST00000563905 RAD54L2Q9Y4B4 1467 aa28.2■■■□□ 2.1
C15orf39-204ENST00000563905 SOGA1O94964 1423 aa28.13■■■□□ 2.09
C15orf39-204ENST00000563905 MAGI1Q96QZ7 1491 aaPredicted RBP28.1■■■□□ 2.09
C15orf39-204ENST00000563905 SYNJ2O15056 1496 aa28.04■■■□□ 2.08
C15orf39-204ENST00000563905 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
C15orf39-204ENST00000563905 GRIN2BQ13224 1484 aa28.01■■■□□ 2.07
C15orf39-204ENST00000563905 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
C15orf39-204ENST00000563905 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
C15orf39-204ENST00000563905 KDM4FA0A1W2PPD8 638 aa27.81■■■□□ 2.04
C15orf39-204ENST00000563905 KIF13AQ9H1H9 1805 aa27.79■■■□□ 2.04
C15orf39-204ENST00000563905 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
C15orf39-204ENST00000563905 CEP170Q5SW79 1584 aa27.7■■■□□ 2.03
C15orf39-204ENST00000563905 FAM69CQ0P6D2 419 aa27.7■■■□□ 2.02
C15orf39-204ENST00000563905 CUX1P39880 1505 aa27.68■■■□□ 2.02
C15orf39-204ENST00000563905 GRIN2AQ12879 1464 aa27.64■■■□□ 2.01
C15orf39-204ENST00000563905 KDM6BO15054 1643 aa27.59■■■□□ 2.01
C15orf39-204ENST00000563905 ABCC10Q5T3U5 1492 aa27.57■■■□□ 2
C15orf39-204ENST00000563905 NPM1P06748 294 aaKnown RBP eCLIP27.55■■■□□ 2
C15orf39-204ENST00000563905 NUP160Q12769 1436 aa27.55■■■□□ 2
C15orf39-204ENST00000563905 ABCA5Q8WWZ7 1642 aa27.55■■■□□ 2
C15orf39-204ENST00000563905 SHROOM2Q13796 1616 aa27.52■■■□□ 2
C15orf39-204ENST00000563905 ABCA10Q8WWZ4 1543 aa27.5■■□□□ 1.99
C15orf39-204ENST00000563905 DIP2BQ9P265 1576 aa27.47■■□□□ 1.99
C15orf39-204ENST00000563905 PRG4Q92954 1404 aaPredicted RBP27.46■■□□□ 1.99
C15orf39-204ENST00000563905 ADAMTS12P58397 1594 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms