RNA–Protein interactions for RNA: ENST00000563894.1

CSK-205, Transcript of C-terminal Src kinase, humanhuman

TSL 1 (best)

Gene CSK, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-205ENST00000563894 NISCHQ9Y2I1 1504 aa47.4■■■■■ 5.18
CSK-205ENST00000563894 CCDC180Q9P1Z9 1646 aa42.08■■■■■ 4.33
CSK-205ENST00000563894 ABCC9O60706 1549 aa41.09■■■■■ 4.17
CSK-205ENST00000563894 NACADO15069 1562 aa39.59■■■■□ 3.93
CSK-205ENST00000563894 RB1CC1Q8TDY2 1594 aa39.59■■■■□ 3.93
CSK-205ENST00000563894 DCAF8L2P0C7V8 631 aa39.48■■■■□ 3.91
CSK-205ENST00000563894 ZCCHC6Q5VYS8 1495 aaKnown RBP39.47■■■■□ 3.91
CSK-205ENST00000563894 MYO15BQ96JP2 1530 aa39.45■■■■□ 3.91
CSK-205ENST00000563894 DCAF1Q9Y4B6 1507 aa39.28■■■■□ 3.88
CSK-205ENST00000563894 UNC13AQ9UPW8 1703 aa38.64■■■■□ 3.78
CSK-205ENST00000563894 PABPN1Q86U42 306 aaKnown RBP eCLIP38.43■■■■□ 3.74
CSK-205ENST00000563894 BICRAQ9NZM4 1560 aa38.42■■■■□ 3.74
CSK-205ENST00000563894 SCRIBQ14160 1630 aa38.3■■■■□ 3.72
CSK-205ENST00000563894 SHROOM4Q9ULL8 1493 aa38.07■■■■□ 3.68
CSK-205ENST00000563894 DNAJC5BQ9UF47 199 aa37.78■■■■□ 3.64
CSK-205ENST00000563894 EIF4G1Q04637 1599 aaKnown RBP37.38■■■■□ 3.57
CSK-205ENST00000563894 CC2D2AQ9P2K1 1620 aa37.19■■■■□ 3.54
CSK-205ENST00000563894 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
CSK-205ENST00000563894 SMARCA4P51532 1647 aa36.72■■■■□ 3.47
CSK-205ENST00000563894 BAZ1AQ9NRL2 1556 aaPredicted RBP36.7■■■■□ 3.47
CSK-205ENST00000563894 NCAPD3P42695 1498 aa36.58■■■■□ 3.45
CSK-205ENST00000563894 ATAD2BQ9ULI0 1458 aa36.56■■■■□ 3.44
CSK-205ENST00000563894 MROH2BQ7Z745 1585 aa36.5■■■■□ 3.43
CSK-205ENST00000563894 SMARCA2P51531 1590 aa36.49■■■■□ 3.43
CSK-205ENST00000563894 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
CSK-205ENST00000563894 HMGXB3Q12766 1538 aa36.34■■■■□ 3.41
CSK-205ENST00000563894 BAZ1BQ9UIG0 1483 aaKnown RBP36.2■■■■□ 3.39
CSK-205ENST00000563894 RSF1Q96T23 1441 aaPredicted RBP36.14■■■■□ 3.38
CSK-205ENST00000563894 WIZO95785 1651 aa36.07■■■■□ 3.36
CSK-205ENST00000563894 TOP2AP11388 1531 aaKnown RBP35.72■■■■□ 3.31
CSK-205ENST00000563894 NESP48681 1621 aa35.58■■■■□ 3.29
CSK-205ENST00000563894 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
CSK-205ENST00000563894 CADPSQ9ULU8 1353 aa35.5■■■■□ 3.27
CSK-205ENST00000563894 ERCC6Q03468 1493 aa35.39■■■■□ 3.26
CSK-205ENST00000563894 PDS5BQ9NTI5 1447 aa35.32■■■■□ 3.25
CSK-205ENST00000563894 CCDC88BA6NC98 1476 aa35.32■■■■□ 3.24
CSK-205ENST00000563894 CFTRP13569 1480 aa35.29■■■■□ 3.24
CSK-205ENST00000563894 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
CSK-205ENST00000563894 KIF21AQ7Z4S6 1674 aa35.12■■■■□ 3.21
CSK-205ENST00000563894 CUX2O14529 1486 aa35.09■■■■□ 3.21
CSK-205ENST00000563894 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
CSK-205ENST00000563894 FANCD2Q9BXW9 1451 aa35.03■■■■□ 3.2
CSK-205ENST00000563894 CEP164Q9UPV0 1460 aa34.97■■■■□ 3.19
CSK-205ENST00000563894 MRC2Q9UBG0 1479 aa34.92■■■■□ 3.18
CSK-205ENST00000563894 PRDM2Q13029 1718 aa34.92■■■■□ 3.18
CSK-205ENST00000563894 WDR62O43379 1518 aa34.81■■■■□ 3.16
CSK-205ENST00000563894 URB2Q14146 1524 aaKnown RBP34.68■■■■□ 3.14
CSK-205ENST00000563894 ABCC8Q09428 1581 aa34.53■■■■□ 3.12
CSK-205ENST00000563894 TOPBP1Q92547 1522 aa34.48■■■■□ 3.11
CSK-205ENST00000563894 DNMBPQ6XZF7 1577 aa34.43■■■■□ 3.1
CSK-205ENST00000563894 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
CSK-205ENST00000563894 CUX1P39880 1505 aa34.23■■■■□ 3.07
CSK-205ENST00000563894 POLA1P09884 1462 aaPredicted RBP34.19■■■■□ 3.06
CSK-205ENST00000563894 TARBP1Q13395 1621 aaKnown RBP34.12■■■■□ 3.05
CSK-205ENST00000563894 FGD5Q6ZNL6 1462 aa34.09■■■■□ 3.05
CSK-205ENST00000563894 ZNF608Q9ULD9 1512 aaPredicted RBP34.08■■■■□ 3.05
CSK-205ENST00000563894 SOGA1O94964 1423 aa34.07■■■■□ 3.04
CSK-205ENST00000563894 DNAJC5Q9H3Z4 198 aa34.03■■■■□ 3.04
CSK-205ENST00000563894 WRNQ14191 1432 aaPredicted RBP eCLIP34.03■■■■□ 3.04
CSK-205ENST00000563894 RAD54L2Q9Y4B4 1467 aa34.02■■■■□ 3.04
CSK-205ENST00000563894 TOP2BQ02880 1626 aa33.95■■■■□ 3.03
CSK-205ENST00000563894 BIVM-ERCC5R4GMW8 1640 aa33.93■■■■□ 3.02
CSK-205ENST00000563894 SYNJ1O43426 1573 aa33.9■■■■□ 3.02
CSK-205ENST00000563894 EIF4G3O43432 1585 aaKnown RBP33.9■■■■□ 3.02
CSK-205ENST00000563894 AQRO60306 1485 aaKnown RBP eCLIP33.9■■■■□ 3.027e-6■■■□□ 17.6
CSK-205ENST00000563894 WDR97A6NE52 1622 aa33.87■■■■□ 3.01
CSK-205ENST00000563894 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
CSK-205ENST00000563894 ABCA10Q8WWZ4 1543 aa33.81■■■■□ 3
CSK-205ENST00000563894 OSCARQ8IYS5 282 aa33.67■■■□□ 2.98
CSK-205ENST00000563894 GRIN2BQ13224 1484 aa33.66■■■□□ 2.98
CSK-205ENST00000563894 GAPVD1Q14C86 1478 aa33.66■■■□□ 2.98
CSK-205ENST00000563894 ABCA5Q8WWZ7 1642 aa33.63■■■□□ 2.97
CSK-205ENST00000563894 MAGI1Q96QZ7 1491 aaPredicted RBP33.57■■■□□ 2.97
CSK-205ENST00000563894 SNAPC4Q5SXM2 1469 aa33.56■■■□□ 2.96
CSK-205ENST00000563894 PBRM1Q86U86 1689 aa33.51■■■□□ 2.95
CSK-205ENST00000563894 CHD1O14646 1710 aa33.45■■■□□ 2.94
CSK-205ENST00000563894 SYNJ2O15056 1496 aa33.44■■■□□ 2.94
CSK-205ENST00000563894 FBLN2P98095 1184 aa33.43■■■□□ 2.94
CSK-205ENST00000563894 CHMP7Q8WUX9 453 aaPredicted RBP33.41■■■□□ 2.94
CSK-205ENST00000563894 ERICH3Q5RHP9 1530 aa33.4■■■□□ 2.94
CSK-205ENST00000563894 KIF27Q86VH2 1401 aa33.33■■■□□ 2.93
CSK-205ENST00000563894 FHAD1B1AJZ9 1412 aa33.29■■■□□ 2.92
CSK-205ENST00000563894 ADAMTS12P58397 1594 aa33.29■■■□□ 2.92
CSK-205ENST00000563894 IGF1RP08069 1367 aa33.24■■■□□ 2.91
CSK-205ENST00000563894 TRIM41Q8WV44 630 aa33.24■■■□□ 2.91
CSK-205ENST00000563894 GRIN2AQ12879 1464 aa33.22■■■□□ 2.91
CSK-205ENST00000563894 CLASP1Q7Z460 1538 aa33.18■■■□□ 2.9
CSK-205ENST00000563894 NUP160Q12769 1436 aa33.11■■■□□ 2.89
CSK-205ENST00000563894 ARHGEF11O15085 1522 aa33.07■■■□□ 2.88
CSK-205ENST00000563894 CUL7Q14999 1698 aa33.06■■■□□ 2.88
CSK-205ENST00000563894 RIMBP3CA6NJZ7 1639 aa33.04■■■□□ 2.88
CSK-205ENST00000563894 RIMBP3BA6NNM3 1639 aa33.04■■■□□ 2.88
CSK-205ENST00000563894 RIMBP3Q9UFD9 1639 aa33.04■■■□□ 2.88
CSK-205ENST00000563894 CEP170Q5SW79 1584 aa33.03■■■□□ 2.88
CSK-205ENST00000563894 RUSC2Q8N2Y8 1516 aa33.02■■■□□ 2.88
CSK-205ENST00000563894 CARMIL1Q5VZK9 1371 aa33■■■□□ 2.87
CSK-205ENST00000563894 CHIC1Q5VXU3 224 aa32.91■■■□□ 2.86
CSK-205ENST00000563894 SHROOM2Q13796 1616 aa32.83■■■□□ 2.85
CSK-205ENST00000563894 ARAP1Q96P48 1450 aa32.8■■■□□ 2.84
CSK-205ENST00000563894 KIAA0586Q9BVV6 1533 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms