RNA–Protein interactions for RNA: ENST00000563442.1

TMEM178B-201, Transcript of transmembrane protein 178B, humanhuman

TSL 2

Gene TMEM178B, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM178B-201ENST00000563442 NISCHQ9Y2I1 1504 aa36.37■■■■□ 3.41
TMEM178B-201ENST00000563442 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
TMEM178B-201ENST00000563442 ABCC9O60706 1549 aa31.54■■■□□ 2.64
TMEM178B-201ENST00000563442 RB1CC1Q8TDY2 1594 aa30.4■■■□□ 2.46
TMEM178B-201ENST00000563442 NACADO15069 1562 aa30.38■■■□□ 2.45
TMEM178B-201ENST00000563442 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
TMEM178B-201ENST00000563442 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
TMEM178B-201ENST00000563442 MYO15BQ96JP2 1530 aa30.22■■■□□ 2.43
TMEM178B-201ENST00000563442 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
TMEM178B-201ENST00000563442 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.35
TMEM178B-201ENST00000563442 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
TMEM178B-201ENST00000563442 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
TMEM178B-201ENST00000563442 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
TMEM178B-201ENST00000563442 SHROOM4Q9ULL8 1493 aa29.19■■■□□ 2.26
TMEM178B-201ENST00000563442 DNAJC5BQ9UF47 199 aa28.84■■■□□ 2.21
TMEM178B-201ENST00000563442 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.18
TMEM178B-201ENST00000563442 CC2D2AQ9P2K1 1620 aa28.56■■■□□ 2.16
TMEM178B-201ENST00000563442 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
TMEM178B-201ENST00000563442 SMARCA4P51532 1647 aa28.24■■■□□ 2.11
TMEM178B-201ENST00000563442 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
TMEM178B-201ENST00000563442 ATAD2BQ9ULI0 1458 aa28.03■■■□□ 2.08
TMEM178B-201ENST00000563442 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
TMEM178B-201ENST00000563442 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
TMEM178B-201ENST00000563442 NCAPD3P42695 1498 aa28.01■■■□□ 2.07
TMEM178B-201ENST00000563442 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
TMEM178B-201ENST00000563442 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
TMEM178B-201ENST00000563442 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
TMEM178B-201ENST00000563442 WIZO95785 1651 aa27.75■■■□□ 2.03
TMEM178B-201ENST00000563442 RSF1Q96T23 1441 aaPredicted RBP27.71■■■□□ 2.03
TMEM178B-201ENST00000563442 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
TMEM178B-201ENST00000563442 NESP48681 1621 aa27.31■■□□□ 1.96
TMEM178B-201ENST00000563442 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
TMEM178B-201ENST00000563442 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
TMEM178B-201ENST00000563442 ERCC6Q03468 1493 aa27.18■■□□□ 1.94
TMEM178B-201ENST00000563442 CCDC88BA6NC98 1476 aa27.1■■□□□ 1.93
TMEM178B-201ENST00000563442 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
TMEM178B-201ENST00000563442 CFTRP13569 1480 aa27.05■■□□□ 1.92
TMEM178B-201ENST00000563442 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
TMEM178B-201ENST00000563442 SUPT5HO00267 1087 aaKnown RBP26.99■■□□□ 1.91
TMEM178B-201ENST00000563442 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
TMEM178B-201ENST00000563442 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
TMEM178B-201ENST00000563442 CUX2O14529 1486 aa26.89■■□□□ 1.9
TMEM178B-201ENST00000563442 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
TMEM178B-201ENST00000563442 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
TMEM178B-201ENST00000563442 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
TMEM178B-201ENST00000563442 WDR62O43379 1518 aa26.74■■□□□ 1.87
TMEM178B-201ENST00000563442 URB2Q14146 1524 aaKnown RBP26.62■■□□□ 1.85
TMEM178B-201ENST00000563442 TOPBP1Q92547 1522 aa26.47■■□□□ 1.83
TMEM178B-201ENST00000563442 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
TMEM178B-201ENST00000563442 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
TMEM178B-201ENST00000563442 CUX1P39880 1505 aa26.3■■□□□ 1.8
TMEM178B-201ENST00000563442 IFT140Q96RY7 1462 aa26.28■■□□□ 1.8
TMEM178B-201ENST00000563442 POLA1P09884 1462 aaPredicted RBP26.25■■□□□ 1.79
TMEM178B-201ENST00000563442 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
TMEM178B-201ENST00000563442 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
TMEM178B-201ENST00000563442 ZNF608Q9ULD9 1512 aaPredicted RBP26.15■■□□□ 1.78
TMEM178B-201ENST00000563442 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
TMEM178B-201ENST00000563442 BIVM-ERCC5R4GMW8 1640 aa26.12■■□□□ 1.77
TMEM178B-201ENST00000563442 RAD54L2Q9Y4B4 1467 aa26.11■■□□□ 1.77
TMEM178B-201ENST00000563442 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
TMEM178B-201ENST00000563442 SOGA1O94964 1423 aa26.11■■□□□ 1.77
TMEM178B-201ENST00000563442 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
TMEM178B-201ENST00000563442 EIF4G3O43432 1585 aaKnown RBP26.1■■□□□ 1.77
TMEM178B-201ENST00000563442 WDR97A6NE52 1622 aa26.04■■□□□ 1.76
TMEM178B-201ENST00000563442 AQRO60306 1485 aaKnown RBP eCLIP25.99■■□□□ 1.75
TMEM178B-201ENST00000563442 ABCA10Q8WWZ4 1543 aa25.95■■□□□ 1.74
TMEM178B-201ENST00000563442 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
TMEM178B-201ENST00000563442 DNAJC5Q9H3Z4 198 aa25.92■■□□□ 1.74
TMEM178B-201ENST00000563442 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
TMEM178B-201ENST00000563442 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
TMEM178B-201ENST00000563442 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
TMEM178B-201ENST00000563442 GRIN2BQ13224 1484 aa25.82■■□□□ 1.72
TMEM178B-201ENST00000563442 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
TMEM178B-201ENST00000563442 CHD1O14646 1710 aa25.77■■□□□ 1.72
TMEM178B-201ENST00000563442 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
TMEM178B-201ENST00000563442 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
TMEM178B-201ENST00000563442 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
TMEM178B-201ENST00000563442 ERICH3Q5RHP9 1530 aa25.65■■□□□ 1.7
TMEM178B-201ENST00000563442 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
TMEM178B-201ENST00000563442 FBLN2P98095 1184 aa25.62■■□□□ 1.69
TMEM178B-201ENST00000563442 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
TMEM178B-201ENST00000563442 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
TMEM178B-201ENST00000563442 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
TMEM178B-201ENST00000563442 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
TMEM178B-201ENST00000563442 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
TMEM178B-201ENST00000563442 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
TMEM178B-201ENST00000563442 CUL7Q14999 1698 aa25.45■■□□□ 1.66
TMEM178B-201ENST00000563442 IGF1RP08069 1367 aa25.44■■□□□ 1.66
TMEM178B-201ENST00000563442 CEP170Q5SW79 1584 aa25.39■■□□□ 1.65
TMEM178B-201ENST00000563442 NUP160Q12769 1436 aa25.38■■□□□ 1.65
TMEM178B-201ENST00000563442 RIMBP3CA6NJZ7 1639 aa25.38■■□□□ 1.65
TMEM178B-201ENST00000563442 RIMBP3BA6NNM3 1639 aa25.38■■□□□ 1.65
TMEM178B-201ENST00000563442 RIMBP3Q9UFD9 1639 aa25.38■■□□□ 1.65
TMEM178B-201ENST00000563442 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
TMEM178B-201ENST00000563442 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
TMEM178B-201ENST00000563442 CARMIL1Q5VZK9 1371 aa25.3■■□□□ 1.64
TMEM178B-201ENST00000563442 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
TMEM178B-201ENST00000563442 SHROOM2Q13796 1616 aa25.22■■□□□ 1.63
TMEM178B-201ENST00000563442 RAPGEF2Q9Y4G8 1499 aa25.18■■□□□ 1.62
TMEM178B-201ENST00000563442 ARAP1Q96P48 1450 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms