RNA–Protein interactions for RNA: ENST00000563144.1

PDCD6IPP2-202, Transcript of PDCD6IP pseudogene 2, humanhuman

TSL 1 (best)

Gene PDCD6IPP2, Length 480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IPP2-202ENST00000563144 NISCHQ9Y2I1 1504 aa45.21■■■■■ 4.83
PDCD6IPP2-202ENST00000563144 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
PDCD6IPP2-202ENST00000563144 ABCC9O60706 1549 aa39.92■■■■□ 3.98
PDCD6IPP2-202ENST00000563144 RB1CC1Q8TDY2 1594 aa38.29■■■■□ 3.72
PDCD6IPP2-202ENST00000563144 NACADO15069 1562 aa38.19■■■■□ 3.7
PDCD6IPP2-202ENST00000563144 MYO15BQ96JP2 1530 aa37.96■■■■□ 3.67
PDCD6IPP2-202ENST00000563144 DCAF8L2P0C7V8 631 aa37.74■■■■□ 3.63
PDCD6IPP2-202ENST00000563144 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
PDCD6IPP2-202ENST00000563144 DCAF1Q9Y4B6 1507 aa37.56■■■■□ 3.6
PDCD6IPP2-202ENST00000563144 DNAJC5BQ9UF47 199 aa37.44■■■■□ 3.58
PDCD6IPP2-202ENST00000563144 PABPN1Q86U42 306 aaKnown RBP eCLIP37.22■■■■□ 3.55
PDCD6IPP2-202ENST00000563144 UNC13AQ9UPW8 1703 aa37.2■■■■□ 3.55
PDCD6IPP2-202ENST00000563144 BICRAQ9NZM4 1560 aa36.99■■■■□ 3.51
PDCD6IPP2-202ENST00000563144 SHROOM4Q9ULL8 1493 aa36.96■■■■□ 3.51
PDCD6IPP2-202ENST00000563144 AEBP2Q6ZN18 517 aaPredicted RBP36.72■■■■□ 3.47
PDCD6IPP2-202ENST00000563144 SCRIBQ14160 1630 aa36.64■■■■□ 3.46
PDCD6IPP2-202ENST00000563144 EIF4G1Q04637 1599 aaKnown RBP36.11■■■■□ 3.37
PDCD6IPP2-202ENST00000563144 CC2D2AQ9P2K1 1620 aa36.05■■■■□ 3.36
PDCD6IPP2-202ENST00000563144 CECR2Q9BXF3 1484 aa35.92■■■■□ 3.34
PDCD6IPP2-202ENST00000563144 NCAPD3P42695 1498 aa35.23■■■■□ 3.23
PDCD6IPP2-202ENST00000563144 BAZ1AQ9NRL2 1556 aaPredicted RBP35.13■■■■□ 3.21
PDCD6IPP2-202ENST00000563144 SMARCA2P51531 1590 aa35.13■■■■□ 3.21
PDCD6IPP2-202ENST00000563144 SMARCA4P51532 1647 aa35.12■■■■□ 3.21
PDCD6IPP2-202ENST00000563144 ATAD2BQ9ULI0 1458 aa35.09■■■■□ 3.21
PDCD6IPP2-202ENST00000563144 HMGXB3Q12766 1538 aa35.02■■■■□ 3.2
PDCD6IPP2-202ENST00000563144 PEG3Q9GZU2 1588 aa34.92■■■■□ 3.18
PDCD6IPP2-202ENST00000563144 BAZ1BQ9UIG0 1483 aaKnown RBP34.78■■■■□ 3.16
PDCD6IPP2-202ENST00000563144 MROH2BQ7Z745 1585 aa34.71■■■■□ 3.15
PDCD6IPP2-202ENST00000563144 ERCC6Q03468 1493 aa34.46■■■■□ 3.11
PDCD6IPP2-202ENST00000563144 CHIC1Q5VXU3 224 aa34.41■■■■□ 3.1
PDCD6IPP2-202ENST00000563144 CUX2O14529 1486 aa34.39■■■■□ 3.1
PDCD6IPP2-202ENST00000563144 NESP48681 1621 aa34.36■■■■□ 3.09
PDCD6IPP2-202ENST00000563144 LAMC3Q9Y6N6 1575 aa34.36■■■■□ 3.09
PDCD6IPP2-202ENST00000563144 WIZO95785 1651 aa34.25■■■■□ 3.07
PDCD6IPP2-202ENST00000563144 RSF1Q96T23 1441 aaPredicted RBP34.23■■■■□ 3.07
PDCD6IPP2-202ENST00000563144 PDS5BQ9NTI5 1447 aa34.18■■■■□ 3.06
PDCD6IPP2-202ENST00000563144 DNAJC5Q9H3Z4 198 aa34.17■■■■□ 3.06
PDCD6IPP2-202ENST00000563144 CADPSQ9ULU8 1353 aa34.14■■■■□ 3.06
PDCD6IPP2-202ENST00000563144 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
PDCD6IPP2-202ENST00000563144 THOC2Q8NI27 1593 aaKnown RBP33.94■■■■□ 3.02
PDCD6IPP2-202ENST00000563144 KIF21AQ7Z4S6 1674 aa33.89■■■■□ 3.02
PDCD6IPP2-202ENST00000563144 CFTRP13569 1480 aa33.85■■■■□ 3.01
PDCD6IPP2-202ENST00000563144 MRC2Q9UBG0 1479 aa33.77■■■■□ 3
PDCD6IPP2-202ENST00000563144 CEP164Q9UPV0 1460 aa33.73■■■□□ 2.99
PDCD6IPP2-202ENST00000563144 FANCD2Q9BXW9 1451 aa33.69■■■□□ 2.98
PDCD6IPP2-202ENST00000563144 WDR62O43379 1518 aa33.68■■■□□ 2.98
PDCD6IPP2-202ENST00000563144 CCDC88BA6NC98 1476 aa33.57■■■□□ 2.97
PDCD6IPP2-202ENST00000563144 PRDM2Q13029 1718 aa33.45■■■□□ 2.94
PDCD6IPP2-202ENST00000563144 URB2Q14146 1524 aaKnown RBP33.31■■■□□ 2.92
PDCD6IPP2-202ENST00000563144 ABCC8Q09428 1581 aa33.26■■■□□ 2.92
PDCD6IPP2-202ENST00000563144 IFT140Q96RY7 1462 aa33.09■■■□□ 2.89
PDCD6IPP2-202ENST00000563144 TOPBP1Q92547 1522 aa33.08■■■□□ 2.89
PDCD6IPP2-202ENST00000563144 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
PDCD6IPP2-202ENST00000563144 SUPT5HO00267 1087 aaKnown RBP32.85■■■□□ 2.85
PDCD6IPP2-202ENST00000563144 OSCARQ8IYS5 282 aa32.82■■■□□ 2.84
PDCD6IPP2-202ENST00000563144 ZNF608Q9ULD9 1512 aaPredicted RBP32.78■■■□□ 2.84
PDCD6IPP2-202ENST00000563144 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
PDCD6IPP2-202ENST00000563144 POLA1P09884 1462 aaPredicted RBP32.77■■■□□ 2.84
PDCD6IPP2-202ENST00000563144 TARBP1Q13395 1621 aaKnown RBP32.73■■■□□ 2.83
PDCD6IPP2-202ENST00000563144 WDR97A6NE52 1622 aa32.69■■■□□ 2.82
PDCD6IPP2-202ENST00000563144 EIF4G3O43432 1585 aaKnown RBP32.68■■■□□ 2.82
PDCD6IPP2-202ENST00000563144 SOGA1O94964 1423 aa32.66■■■□□ 2.82
PDCD6IPP2-202ENST00000563144 CUX1P39880 1505 aa32.61■■■□□ 2.81
PDCD6IPP2-202ENST00000563144 FGD5Q6ZNL6 1462 aa32.61■■■□□ 2.81
PDCD6IPP2-202ENST00000563144 AQRO60306 1485 aaKnown RBP eCLIP32.55■■■□□ 2.8
PDCD6IPP2-202ENST00000563144 RAD54L2Q9Y4B4 1467 aa32.52■■■□□ 2.8
PDCD6IPP2-202ENST00000563144 TDRD9Q8NDG6 1382 aaKnown RBP32.44■■■□□ 2.78
PDCD6IPP2-202ENST00000563144 GRIN2BQ13224 1484 aa32.39■■■□□ 2.78
PDCD6IPP2-202ENST00000563144 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
PDCD6IPP2-202ENST00000563144 ABCA10Q8WWZ4 1543 aa32.37■■■□□ 2.77
PDCD6IPP2-202ENST00000563144 RIMBP3CA6NJZ7 1639 aa32.36■■■□□ 2.77
PDCD6IPP2-202ENST00000563144 RIMBP3BA6NNM3 1639 aa32.36■■■□□ 2.77
PDCD6IPP2-202ENST00000563144 RIMBP3Q9UFD9 1639 aa32.36■■■□□ 2.77
PDCD6IPP2-202ENST00000563144 WRNQ14191 1432 aaPredicted RBP eCLIP32.35■■■□□ 2.77
PDCD6IPP2-202ENST00000563144 CHD1O14646 1710 aa32.31■■■□□ 2.76
PDCD6IPP2-202ENST00000563144 TOP2BQ02880 1626 aa32.29■■■□□ 2.76
PDCD6IPP2-202ENST00000563144 SNAPC4Q5SXM2 1469 aa32.29■■■□□ 2.76
PDCD6IPP2-202ENST00000563144 GAPVD1Q14C86 1478 aa32.28■■■□□ 2.76
PDCD6IPP2-202ENST00000563144 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.76
PDCD6IPP2-202ENST00000563144 ARHGEF11O15085 1522 aa32.26■■■□□ 2.75
PDCD6IPP2-202ENST00000563144 FBLN2P98095 1184 aa32.24■■■□□ 2.75
PDCD6IPP2-202ENST00000563144 SYNJ2O15056 1496 aa32.23■■■□□ 2.75
PDCD6IPP2-202ENST00000563144 CHMP7Q8WUX9 453 aaPredicted RBP32.21■■■□□ 2.75
PDCD6IPP2-202ENST00000563144 ABCA5Q8WWZ7 1642 aa32.2■■■□□ 2.75
PDCD6IPP2-202ENST00000563144 SYNJ1O43426 1573 aa32.15■■■□□ 2.74
PDCD6IPP2-202ENST00000563144 PBRM1Q86U86 1689 aa32.11■■■□□ 2.73
PDCD6IPP2-202ENST00000563144 CLASP1Q7Z460 1538 aa32.06■■■□□ 2.72
PDCD6IPP2-202ENST00000563144 CYB5RLQ6IPT4 315 aa32.01■■■□□ 2.71
PDCD6IPP2-202ENST00000563144 ERICH3Q5RHP9 1530 aa32■■■□□ 2.71
PDCD6IPP2-202ENST00000563144 ARAP1Q96P48 1450 aa31.97■■■□□ 2.71
PDCD6IPP2-202ENST00000563144 FHAD1B1AJZ9 1412 aa31.95■■■□□ 2.71
PDCD6IPP2-202ENST00000563144 GRIN2AQ12879 1464 aa31.92■■■□□ 2.7
PDCD6IPP2-202ENST00000563144 ADAMTS12P58397 1594 aa31.92■■■□□ 2.7
PDCD6IPP2-202ENST00000563144 NUP160Q12769 1436 aa31.84■■■□□ 2.69
PDCD6IPP2-202ENST00000563144 KIF27Q86VH2 1401 aa31.75■■■□□ 2.67
PDCD6IPP2-202ENST00000563144 CEP170Q5SW79 1584 aa31.68■■■□□ 2.66
PDCD6IPP2-202ENST00000563144 SHROOM2Q13796 1616 aa31.6■■■□□ 2.65
PDCD6IPP2-202ENST00000563144 IGF1RP08069 1367 aa31.6■■■□□ 2.65
PDCD6IPP2-202ENST00000563144 TRHP20396 242 aaPredicted RBP31.59■■■□□ 2.65
PDCD6IPP2-202ENST00000563144 CUL7Q14999 1698 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 312.8 ms